Protein ID | Ophio5|1085 |
Gene name | |
Location | scaffold_133:37321..38851 |
Strand | - |
Gene length (bp) | 1530 |
Transcript length (bp) | 1530 |
Coding sequence length (bp) | 1527 |
Protein length (aa) | 509 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02434 | Fringe | Fringe-like | 5.6E-08 | 236 | 335 |
PF04646 | DUF604 | Protein of unknown function, DUF604 | 8.8E-07 | 287 | 370 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0016757 | glycosyltransferase activity | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0003824 | catalytic activity | No |
GO:0016740 | transferase activity | No |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Golgi apparatus | Signal peptide|Transmembrane domain | 0.1489 | 0.1273 | 0.2674 | 0.1455 | 0.1129 | 0.0192 | 0.473 | 0.2987 | 0.9354 | 0.0144 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 26 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 179 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|1085 MMRRRRRLTLVYLSALVAFALVVGLMQNRITSSSESSVLFGSRLSTAAKVCSFDASHFTDIKRRYNIDDRFHYFS RTIHFRRSKGLERKAMTLLPQTLLDTTKAITVDVAEQSNGGAIVGDCSKPLQVQVPVSDLPSTVNASDFMFGIST TYQRLNESRPDIIDDWKYWLTDGSGLSNGAKLYLTLLDASDEQLRDVRVLLRQAGIDASVDRSQDRDMPVRYINL VPHLYRQEDSRLRKWLVLCDDDTFFPSMHSLVQRLSSFDHTRELYIGTLSEDVGAVERHGSQAFGGAGVFLSLPM AKRIAESIGSCASMDKVNEAGWQGDKLLRNCIYENSDTRLVLLPDLWQLDIRGDPSGFYEWGQKPLSLHHYRGGG WHTARPAQFSKIAYVCGEDCILQRFQTADNFILSGHSVAYYPAGITFDTSQVERTFGALQEKSWNFDFVFGPQRP PLKSRGHKVAWEIQGSEVRPDGSVLQTYLRKKDRVRWEGVGSQQMGELDSVVELLWRPS |
Coding | >Ophio5|1085 ATGATGCGGAGGAGGAGGAGATTGACGCTCGTCTACTTATCCGCTCTTGTCGCTTTCGCCTTGGTTGTTGGCTTG ATGCAGAATCGGATAACGTCGAGTTCAGAGTCGTCGGTTTTGTTCGGAAGCAGGCTTTCGACTGCCGCCAAAGTC TGCTCTTTCGATGCCTCTCACTTTACCGACATCAAACGACGATATAACATCGACGATCGCTTCCACTACTTTAGT CGAACTATTCACTTCCGACGCAGTAAAGGCCTTGAGCGAAAGGCAATGACACTCCTCCCGCAAACACTGCTCGAC ACTACCAAGGCTATCACAGTTGACGTCGCCGAGCAAAGCAATGGAGGCGCCATCGTTGGCGACTGCTCCAAACCT CTGCAAGTCCAGGTTCCTGTCTCCGACCTTCCCTCCACCGTCAACGCTTCCGACTTCATGTTTGGCATATCGACT ACGTACCAGCGGCTAAACGAGTCGCGTCCGGACATCATCGACGACTGGAAATATTGGCTCACCGATGGCAGCGGC TTGAGCAACGGCGCAAAGCTGTATCTTACCCTCTTGGATGCCAGCGACGAGCAGCTCCGTGACGTGCGTGTACTT CTTCGTCAAGCTGGCATTGACGCCTCCGTCGACCGGTCACAGGACCGAGACATGCCCGTACGCTATATTAATCTC GTTCCGCATCTCTATCGCCAAGAGGATTCCCGGTTAAGGAAGTGGCTGGTTCTTTGCGACGACGATACCTTCTTC CCCAGCATGCATAGTCTCGTCCAACGGCTCTCCTCCTTCGATCACACCAGAGAGCTCTACATCGGCACCCTTTCG GAAGACGTCGGAGCCGTCGAGCGCCACGGCTCGCAAGCATTCGGTGGAGCCGGCGTCTTCCTCTCTCTACCAATG GCCAAGCGAATAGCAGAGTCCATCGGCAGCTGTGCGTCCATGGACAAGGTTAATGAAGCAGGCTGGCAGGGCGAC AAGCTCCTGCGCAATTGCATCTACGAAAACAGCGACACGCGGCTCGTCCTCCTTCCGGACCTCTGGCAGCTCGAC ATCCGCGGCGACCCGTCCGGCTTCTATGAGTGGGGTCAGAAGCCGCTCTCGCTACACCATTACCGAGGCGGCGGC TGGCACACGGCTCGTCCAGCGCAGTTTAGCAAGATCGCCTACGTCTGCGGCGAGGACTGCATCTTGCAGCGGTTT CAGACGGCCGACAACTTCATCCTTTCCGGCCATTCGGTTGCCTACTACCCTGCCGGCATCACGTTCGATACGAGC CAGGTCGAGCGGACGTTTGGGGCTTTGCAGGAGAAGAGCTGGAATTTTGACTTTGTCTTTGGCCCTCAGCGGCCG CCGCTCAAGTCAAGGGGGCACAAGGTTGCCTGGGAGATCCAAGGGTCCGAGGTTCGACCCGATGGCTCCGTCTTG CAGACTTACTTGAGGAAGAAAGACCGTGTTCGCTGGGAGGGCGTGGGGAGTCAGCAGATGGGTGAGCTGGACAGC GTGGTTGAGCTGCTGTGGAGGCCTTCC |
Transcript | >Ophio5|1085 ATGATGCGGAGGAGGAGGAGATTGACGCTCGTCTACTTATCCGCTCTTGTCGCTTTCGCCTTGGTTGTTGGCTTG ATGCAGAATCGGATAACGTCGAGTTCAGAGTCGTCGGTTTTGTTCGGAAGCAGGCTTTCGACTGCCGCCAAAGTC TGCTCTTTCGATGCCTCTCACTTTACCGACATCAAACGACGATATAACATCGACGATCGCTTCCACTACTTTAGT CGAACTATTCACTTCCGACGCAGTAAAGGCCTTGAGCGAAAGGCAATGACACTCCTCCCGCAAACACTGCTCGAC ACTACCAAGGCTATCACAGTTGACGTCGCCGAGCAAAGCAATGGAGGCGCCATCGTTGGCGACTGCTCCAAACCT CTGCAAGTCCAGGTTCCTGTCTCCGACCTTCCCTCCACCGTCAACGCTTCCGACTTCATGTTTGGCATATCGACT ACGTACCAGCGGCTAAACGAGTCGCGTCCGGACATCATCGACGACTGGAAATATTGGCTCACCGATGGCAGCGGC TTGAGCAACGGCGCAAAGCTGTATCTTACCCTCTTGGATGCCAGCGACGAGCAGCTCCGTGACGTGCGTGTACTT CTTCGTCAAGCTGGCATTGACGCCTCCGTCGACCGGTCACAGGACCGAGACATGCCCGTACGCTATATTAATCTC GTTCCGCATCTCTATCGCCAAGAGGATTCCCGGTTAAGGAAGTGGCTGGTTCTTTGCGACGACGATACCTTCTTC CCCAGCATGCATAGTCTCGTCCAACGGCTCTCCTCCTTCGATCACACCAGAGAGCTCTACATCGGCACCCTTTCG GAAGACGTCGGAGCCGTCGAGCGCCACGGCTCGCAAGCATTCGGTGGAGCCGGCGTCTTCCTCTCTCTACCAATG GCCAAGCGAATAGCAGAGTCCATCGGCAGCTGTGCGTCCATGGACAAGGTTAATGAAGCAGGCTGGCAGGGCGAC AAGCTCCTGCGCAATTGCATCTACGAAAACAGCGACACGCGGCTCGTCCTCCTTCCGGACCTCTGGCAGCTCGAC ATCCGCGGCGACCCGTCCGGCTTCTATGAGTGGGGTCAGAAGCCGCTCTCGCTACACCATTACCGAGGCGGCGGC TGGCACACGGCTCGTCCAGCGCAGTTTAGCAAGATCGCCTACGTCTGCGGCGAGGACTGCATCTTGCAGCGGTTT CAGACGGCCGACAACTTCATCCTTTCCGGCCATTCGGTTGCCTACTACCCTGCCGGCATCACGTTCGATACGAGC CAGGTCGAGCGGACGTTTGGGGCTTTGCAGGAGAAGAGCTGGAATTTTGACTTTGTCTTTGGCCCTCAGCGGCCG CCGCTCAAGTCAAGGGGGCACAAGGTTGCCTGGGAGATCCAAGGGTCCGAGGTTCGACCCGATGGCTCCGTCTTG CAGACTTACTTGAGGAAGAAAGACCGTGTTCGCTGGGAGGGCGTGGGGAGTCAGCAGATGGGTGAGCTGGACAGC GTGGTTGAGCTGCTGTGGAGGCCTTCCTAG |
Gene | >Ophio5|1085 ATGATGCGGAGGAGGAGGAGATTGACGCTCGTCTACTTATCCGCTCTTGTCGCTTTCGCCTTGGTTGTTGGCTTG ATGCAGAATCGGATAACGTCGAGTTCAGAGTCGTCGGTTTTGTTCGGAAGCAGGCTTTCGACTGCCGCCAAAGTC TGCTCTTTCGATGCCTCTCACTTTACCGACATCAAACGACGATATAACATCGACGATCGCTTCCACTACTTTAGT CGAACTATTCACTTCCGACGCAGTAAAGGCCTTGAGCGAAAGGCAATGACACTCCTCCCGCAAACACTGCTCGAC ACTACCAAGGCTATCACAGTTGACGTCGCCGAGCAAAGCAATGGAGGCGCCATCGTTGGCGACTGCTCCAAACCT CTGCAAGTCCAGGTTCCTGTCTCCGACCTTCCCTCCACCGTCAACGCTTCCGACTTCATGTTTGGCATATCGACT ACGTACCAGCGGCTAAACGAGTCGCGTCCGGACATCATCGACGACTGGAAATATTGGCTCACCGATGGCAGCGGC TTGAGCAACGGCGCAAAGCTGTATCTTACCCTCTTGGATGCCAGCGACGAGCAGCTCCGTGACGTGCGTGTACTT CTTCGTCAAGCTGGCATTGACGCCTCCGTCGACCGGTCACAGGACCGAGACATGCCCGTACGCTATATTAATCTC GTTCCGCATCTCTATCGCCAAGAGGATTCCCGGTTAAGGAAGTGGCTGGTTCTTTGCGACGACGATACCTTCTTC CCCAGCATGCATAGTCTCGTCCAACGGCTCTCCTCCTTCGATCACACCAGAGAGCTCTACATCGGCACCCTTTCG GAAGACGTCGGAGCCGTCGAGCGCCACGGCTCGCAAGCATTCGGTGGAGCCGGCGTCTTCCTCTCTCTACCAATG GCCAAGCGAATAGCAGAGTCCATCGGCAGCTGTGCGTCCATGGACAAGGTTAATGAAGCAGGCTGGCAGGGCGAC AAGCTCCTGCGCAATTGCATCTACGAAAACAGCGACACGCGGCTCGTCCTCCTTCCGGACCTCTGGCAGCTCGAC ATCCGCGGCGACCCGTCCGGCTTCTATGAGTGGGGTCAGAAGCCGCTCTCGCTACACCATTACCGAGGCGGCGGC TGGCACACGGCTCGTCCAGCGCAGTTTAGCAAGATCGCCTACGTCTGCGGCGAGGACTGCATCTTGCAGCGGTTT CAGACGGCCGACAACTTCATCCTTTCCGGCCATTCGGTTGCCTACTACCCTGCCGGCATCACGTTCGATACGAGC CAGGTCGAGCGGACGTTTGGGGCTTTGCAGGAGAAGAGCTGGAATTTTGACTTTGTCTTTGGCCCTCAGCGGCCG CCGCTCAAGTCAAGGGGGCACAAGGTTGCCTGGGAGATCCAAGGGTCCGAGGTTCGACCCGATGGCTCCGTCTTG CAGACTTACTTGAGGAAGAAAGACCGTGTTCGCTGGGAGGGCGTGGGGAGTCAGCAGATGGGTGAGCTGGACAGC GTGGTTGAGCTGCTGTGGAGGCCTTCCTAG |