Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1065
Gene name
Locationscaffold_132:38270..39172
Strand-
Gene length (bp)902
Transcript length (bp)798
Coding sequence length (bp)795
Protein length (aa) 265

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11937 DUF3455 Protein of unknown function (DUF3455) 3.1E-28 48 265

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1065
MIMSSSPLLALALTALVQTVPSYAAATGPLLPQTGTGQQLPSPPPGVVLKHIALGFGIQNYTCDKAGQPAVATGA
LAMLYDVTTLYPGQGRASLSRAEFDNLTAKVLSTAHVPINVHHNHHHHHHHEPDTDVDACVVDSAAAYATRPDGH
PFPPDAALSVDGIPQPLPFLGHHYFDADGVPVFRLDGGRTDMPAAKVAAVQPPAAAYPGPDGTGAVAWLLLRRKH
GAVGVKYVYRVLTAGGASHGCARAPADDSSSYAATYWFYG
Coding >Ophio5|1065
ATGATCATGTCCTCCTCGCCTCTTCTTGCTCTCGCCTTGACGGCCCTAGTCCAGACGGTCCCCAGCTACGCCGCC
GCCACAGGCCCCCTATTGCCCCAGACGGGCACCGGGCAACAACTCCCCTCTCCGCCGCCTGGCGTTGTTCTCAAG
CACATCGCCCTCGGCTTCGGTATTCAAAACTACACATGCGACAAGGCCGGCCAGCCAGCCGTCGCCACCGGCGCG
CTGGCCATGCTTTACGACGTGACGACGCTGTATCCTGGTCAGGGCAGGGCCTCGCTCTCACGAGCCGAGTTTGAC
AACCTCACTGCAAAGGTCCTCTCTACCGCCCACGTCCCCATCAACGTCCATCATAATCATCATCATCATCATCAT
CATGAGCCCGACACCGACGTCGACGCCTGTGTCGTCGACTCGGCTGCCGCCTACGCTACCCGTCCTGATGGCCAT
CCGTTCCCGCCTGATGCCGCCCTCTCCGTCGACGGCATCCCTCAGCCGCTCCCCTTTCTCGGCCATCACTACTTC
GACGCAGACGGCGTTCCCGTCTTCCGTCTCGACGGAGGACGCACCGACATGCCGGCCGCAAAGGTGGCCGCTGTC
CAGCCGCCCGCCGCCGCCTATCCCGGCCCGGACGGCACCGGCGCTGTGGCCTGGCTCCTCCTCCGCAGAAAGCAC
GGCGCCGTCGGCGTCAAGTATGTCTATCGCGTCCTCACTGCCGGCGGCGCCAGTCATGGATGTGCTCGCGCCCCG
GCAGACGATAGCTCCAGCTACGCTGCCACCTACTGGTTCTACGGC
Transcript >Ophio5|1065
ATGATCATGTCCTCCTCGCCTCTTCTTGCTCTCGCCTTGACGGCCCTAGTCCAGACGGTCCCCAGCTACGCCGCC
GCCACAGGCCCCCTATTGCCCCAGACGGGCACCGGGCAACAACTCCCCTCTCCGCCGCCTGGCGTTGTTCTCAAG
CACATCGCCCTCGGCTTCGGTATTCAAAACTACACATGCGACAAGGCCGGCCAGCCAGCCGTCGCCACCGGCGCG
CTGGCCATGCTTTACGACGTGACGACGCTGTATCCTGGTCAGGGCAGGGCCTCGCTCTCACGAGCCGAGTTTGAC
AACCTCACTGCAAAGGTCCTCTCTACCGCCCACGTCCCCATCAACGTCCATCATAATCATCATCATCATCATCAT
CATGAGCCCGACACCGACGTCGACGCCTGTGTCGTCGACTCGGCTGCCGCCTACGCTACCCGTCCTGATGGCCAT
CCGTTCCCGCCTGATGCCGCCCTCTCCGTCGACGGCATCCCTCAGCCGCTCCCCTTTCTCGGCCATCACTACTTC
GACGCAGACGGCGTTCCCGTCTTCCGTCTCGACGGAGGACGCACCGACATGCCGGCCGCAAAGGTGGCCGCTGTC
CAGCCGCCCGCCGCCGCCTATCCCGGCCCGGACGGCACCGGCGCTGTGGCCTGGCTCCTCCTCCGCAGAAAGCAC
GGCGCCGTCGGCGTCAAGTATGTCTATCGCGTCCTCACTGCCGGCGGCGCCAGTCATGGATGTGCTCGCGCCCCG
GCAGACGATAGCTCCAGCTACGCTGCCACCTACTGGTTCTACGGCTAG
Gene >Ophio5|1065
ATGATCATGTCCTCCTCGCCTCTTCTTGCTCTCGCCTTGACGGCCCTAGTCCAGACGGTCCCCAGCTACGCCGCC
GCCACAGGCCCCCTATTGCCCCAGACGGGCACCGGTGAGTCGTATTATCCCATCAATGTTGTTCTGCAACTCGAC
CGCTAACACGGGCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTCCCCCTGTCTCAGGGCAACAACTCC
CCTCTCCGCCGCCTGGCGTTGTTCTCAAGCACATCGCCCTCGGCTTCGGTATTCAAAACTACACATGCGACAAGG
CCGGCCAGCCAGCCGTCGCCACCGGCGCGCTGGCCATGCTTTACGACGTGACGACGCTGTATCCTGGTCAGGGCA
GGGCCTCGCTCTCACGAGCCGAGTTTGACAACCTCACTGCAAAGGTCCTCTCTACCGCCCACGTCCCCATCAACG
TCCATCATAATCATCATCATCATCATCATCATGAGCCCGACACCGACGTCGACGCCTGTGTCGTCGACTCGGCTG
CCGCCTACGCTACCCGTCCTGATGGCCATCCGTTCCCGCCTGATGCCGCCCTCTCCGTCGACGGCATCCCTCAGC
CGCTCCCCTTTCTCGGCCATCACTACTTCGACGCAGACGGCGTTCCCGTCTTCCGTCTCGACGGAGGACGCACCG
ACATGCCGGCCGCAAAGGTGGCCGCTGTCCAGCCGCCCGCCGCCGCCTATCCCGGCCCGGACGGCACCGGCGCTG
TGGCCTGGCTCCTCCTCCGCAGAAAGCACGGCGCCGTCGGCGTCAAGTATGTCTATCGCGTCCTCACTGCCGGCG
GCGCCAGTCATGGATGTGCTCGCGCCCCGGCAGACGATAGCTCCAGCTACGCTGCCACCTACTGGTTCTACGGCT
AG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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