Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|1051
Gene name
Location	scaffold_132:12550..13650
Strand	-
Gene length (bp)	1100
Transcript length (bp)	1035
Coding sequence length (bp)	1032
Protein length (aa)	344

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	315	337	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|1051 MVRLVQGLLADGVKTPHDASLLQLSQLLSRLEQNVLRPSAEREQQLLTSEYERKRVGANVEYARKLLANLEQELT AIKAPTRRHEVQEALHAAGEIVDSLEDRLADLRHLAMDQDESSGEEQHPADIVPTPSTSATDTRGSSNLDEDATP PEPEPSVDQPALSVEPPASAAPLVDDDNVSPSSLQALNVMDSTQTTASLRARPSASSGATDASSHSTARAALFAG RSKAAAPQTSTATAEAMLDRQRAEQDALSESILRMAGALKASSQRFSLTLEADKEVVGRAGEGIDRTERGMDAAR GRMGSLKKLTEGKGWWGRMILYAWVYGLMVLLVLLVFAMPKLRF
Coding	>Ophio5\|1051 ATGGTGCGCCTGGTTCAAGGCTTGCTGGCCGACGGCGTGAAAACTCCCCATGACGCCTCCTTACTTCAACTATCC CAGCTCCTCTCTCGGCTCGAACAAAACGTCCTACGTCCGTCGGCCGAGCGGGAGCAGCAGCTACTCACTAGCGAA TACGAGAGGAAGAGGGTCGGAGCGAATGTGGAATATGCCCGCAAGCTGCTCGCCAATCTTGAGCAGGAGCTTACG GCGATCAAGGCGCCGACCCGGAGACACGAGGTTCAGGAGGCGCTGCATGCTGCCGGAGAGATTGTGGACAGCTTG GAGGATCGGCTGGCGGATTTGAGACACCTGGCCATGGACCAGGACGAGAGCTCCGGGGAAGAGCAGCATCCGGCC GACATCGTGCCGACTCCTTCTACATCGGCCACAGACACGCGGGGGAGCAGCAACTTGGATGAGGACGCCACTCCG CCGGAGCCTGAGCCGTCCGTCGACCAACCCGCGTTGTCTGTCGAGCCGCCCGCGTCGGCGGCACCTCTCGTCGAC GATGACAACGTCTCGCCCTCTTCGCTGCAAGCCTTGAACGTCATGGACTCAACGCAGACAACCGCCTCTCTACGC GCCCGCCCATCCGCCTCCTCAGGCGCCACGGACGCGTCCTCACACAGCACAGCCCGTGCAGCCCTCTTCGCCGGT CGGTCCAAAGCAGCGGCGCCGCAGACATCGACGGCAACGGCGGAGGCGATGCTCGACCGGCAGCGCGCCGAGCAG GACGCCCTCTCCGAATCGATCCTCCGCATGGCCGGCGCGCTCAAGGCCAGCTCGCAGCGCTTCTCCTTGACGCTC GAGGCCGACAAGGAAGTCGTCGGCCGCGCAGGCGAGGGCATCGACAGGACAGAGAGGGGCATGGATGCCGCCCGC GGCAGGATGGGCTCGCTGAAGAAGTTGACCGAGGGAAAGGGATGGTGGGGAAGGATGATACTGTATGCTTGGGTG TATGGCTTGATGGTGCTGCTGGTGCTACTGGTTTTTGCCATGCCCAAGTTGAGGTTT
Transcript	>Ophio5\|1051 ATGGTGCGCCTGGTTCAAGGCTTGCTGGCCGACGGCGTGAAAACTCCCCATGACGCCTCCTTACTTCAACTATCC CAGCTCCTCTCTCGGCTCGAACAAAACGTCCTACGTCCGTCGGCCGAGCGGGAGCAGCAGCTACTCACTAGCGAA TACGAGAGGAAGAGGGTCGGAGCGAATGTGGAATATGCCCGCAAGCTGCTCGCCAATCTTGAGCAGGAGCTTACG GCGATCAAGGCGCCGACCCGGAGACACGAGGTTCAGGAGGCGCTGCATGCTGCCGGAGAGATTGTGGACAGCTTG GAGGATCGGCTGGCGGATTTGAGACACCTGGCCATGGACCAGGACGAGAGCTCCGGGGAAGAGCAGCATCCGGCC GACATCGTGCCGACTCCTTCTACATCGGCCACAGACACGCGGGGGAGCAGCAACTTGGATGAGGACGCCACTCCG CCGGAGCCTGAGCCGTCCGTCGACCAACCCGCGTTGTCTGTCGAGCCGCCCGCGTCGGCGGCACCTCTCGTCGAC GATGACAACGTCTCGCCCTCTTCGCTGCAAGCCTTGAACGTCATGGACTCAACGCAGACAACCGCCTCTCTACGC GCCCGCCCATCCGCCTCCTCAGGCGCCACGGACGCGTCCTCACACAGCACAGCCCGTGCAGCCCTCTTCGCCGGT CGGTCCAAAGCAGCGGCGCCGCAGACATCGACGGCAACGGCGGAGGCGATGCTCGACCGGCAGCGCGCCGAGCAG GACGCCCTCTCCGAATCGATCCTCCGCATGGCCGGCGCGCTCAAGGCCAGCTCGCAGCGCTTCTCCTTGACGCTC GAGGCCGACAAGGAAGTCGTCGGCCGCGCAGGCGAGGGCATCGACAGGACAGAGAGGGGCATGGATGCCGCCCGC GGCAGGATGGGCTCGCTGAAGAAGTTGACCGAGGGAAAGGGATGGTGGGGAAGGATGATACTGTATGCTTGGGTG TATGGCTTGATGGTGCTGCTGGTGCTACTGGTTTTTGCCATGCCCAAGTTGAGGTTTTGA
Gene	>Ophio5\|1051 ATGGTGCGCCTGGTTCAAGGCTTGCTGGCCGACGGCGTGAAAACTCCCCATGACGCCTCCTTACTTCAACTATCC CAGCTCCTCTCTCGGCTCGAACAAAACGTCCTACGTCCGTCGGCCGAGCGGGAGCAGCAGCTACTCACTAGCGAA TACGAGAGGAAGAGGGTCGGAGCGGTAGGTCTACGTGTCGGCTCGGCAATGATTCGGTGCGCGGCGCGCTCACGC GATCCGGCCCGCAGAATGTGGAATATGCCCGCAAGCTGCTCGCCAATCTTGAGCAGGAGCTTACGGCGATCAAGG CGCCGACCCGGAGACACGAGGTTCAGGAGGCGCTGCATGCTGCCGGAGAGATTGTGGACAGCTTGGAGGATCGGC TGGCGGATTTGAGACACCTGGCCATGGACCAGGACGAGAGCTCCGGGGAAGAGCAGCATCCGGCCGACATCGTGC CGACTCCTTCTACATCGGCCACAGACACGCGGGGGAGCAGCAACTTGGATGAGGACGCCACTCCGCCGGAGCCTG AGCCGTCCGTCGACCAACCCGCGTTGTCTGTCGAGCCGCCCGCGTCGGCGGCACCTCTCGTCGACGATGACAACG TCTCGCCCTCTTCGCTGCAAGCCTTGAACGTCATGGACTCAACGCAGACAACCGCCTCTCTACGCGCCCGCCCAT CCGCCTCCTCAGGCGCCACGGACGCGTCCTCACACAGCACAGCCCGTGCAGCCCTCTTCGCCGGTCGGTCCAAAG CAGCGGCGCCGCAGACATCGACGGCAACGGCGGAGGCGATGCTCGACCGGCAGCGCGCCGAGCAGGACGCCCTCT CCGAATCGATCCTCCGCATGGCCGGCGCGCTCAAGGCCAGCTCGCAGCGCTTCTCCTTGACGCTCGAGGCCGACA AGGAAGTCGTCGGCCGCGCAGGCGAGGGCATCGACAGGACAGAGAGGGGCATGGATGCCGCCCGCGGCAGGATGG GCTCGCTGAAGAAGTTGACCGAGGGAAAGGGATGGTGGGGAAGGATGATACTGTATGCTTGGGTGTATGGCTTGA TGGTGCTGCTGGTGCTACTGGTTTTTGCCATGCCCAAGTTGAGGTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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