© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|105 |
| Gene name | |
| Location | scaffold_100:4196..5542 |
| Strand | - |
| Gene length (bp) | 1346 |
| Transcript length (bp) | 1134 |
| Coding sequence length (bp) | 1131 |
| Protein length (aa) | 377 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00264 | Tyrosinase | Common central domain of tyrosinase | 2.2E-46 | 96 | 319 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P07524|TYRO_STRAT | Tyrosinase OS=Streptomyces antibioticus GN=melC2 PE=3 SV=2 | 58 | 324 | 5.0E-14 |
| sp|P06845|TYRO_STRGA | Tyrosinase OS=Streptomyces glaucescens GN=melC2 PE=1 SV=3 | 58 | 322 | 3.0E-12 |
| sp|P55023|TYRO_STRLN | Tyrosinase OS=Streptomyces lincolnensis GN=melC2 PE=3 SV=2 | 58 | 320 | 1.0E-11 |
| sp|P55022|TYRO_STRGB | Tyrosinase OS=Streptomyces galbus GN=melC2 PE=3 SV=2 | 58 | 322 | 1.0E-11 |
| sp|B1VTI5|GRIF_STRGG | Grixazone synthase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=griF PE=1 SV=1 | 279 | 327 | 3.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P07524|TYRO_STRAT | Tyrosinase OS=Streptomyces antibioticus GN=melC2 PE=3 SV=2 | 58 | 324 | 5.0E-14 |
| sp|P06845|TYRO_STRGA | Tyrosinase OS=Streptomyces glaucescens GN=melC2 PE=1 SV=3 | 58 | 322 | 3.0E-12 |
| sp|P55023|TYRO_STRLN | Tyrosinase OS=Streptomyces lincolnensis GN=melC2 PE=3 SV=2 | 58 | 320 | 1.0E-11 |
| sp|P55022|TYRO_STRGB | Tyrosinase OS=Streptomyces galbus GN=melC2 PE=3 SV=2 | 58 | 322 | 1.0E-11 |
| sp|B1VTI5|GRIF_STRGG | Grixazone synthase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=griF PE=1 SV=1 | 279 | 327 | 3.0E-08 |
| sp|P00440|TYRO_NEUCR | Tyrosinase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=T PE=1 SV=5 | 111 | 324 | 4.0E-08 |
| sp|P07147|TYRP1_MOUSE | 5,6-dihydroxyindole-2-carboxylic acid oxidase OS=Mus musculus GN=Tyrp1 PE=1 SV=1 | 50 | 320 | 7.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|105 MKLNYGLLLAGLAVTTNGLATGYHRRGDAAHLMSRLSHEYRRDVIDSLPGSVCRREDIVVRKEWDSLSREERIDY TRAVKCLQAKPSRRGNETLARSRFEDFLLTHIDKTFTIHFSGLLLPWHRYFLWLYEQALRKECGYQGYQPYWDWS KYVANPGASSLFDGSDVSMSGDGESIPHGTVDVVIPGGPPPVRYVPRPPGNGGGCVVGGPFQDMTVHIGVSSAGA SAVPEVYSKPRCLTRDLLPFILERRNSYQNVTDLILNSADIDVFYPAVDSNKGVHGGGHGFIGGENLNQFVSPND PVFYLHHAMLDRVWAIWQSRDPDTRQYALNGTLTWENYPPSPDATVQDLVEVGILGADTEIGEVMSTTEGPLCYV YE |
| Coding | >Ophio5|105 ATGAAGCTCAACTACGGTCTGCTACTGGCGGGCCTGGCCGTGACAACAAACGGTCTGGCGACTGGCTACCACCGT CGAGGAGATGCGGCTCATCTCATGAGCCGACTCAGTCACGAATACAGACGGGACGTGATAGACTCCCTGCCGGGG AGCGTCTGTCGCCGTGAGGATATCGTGGTGCGAAAAGAATGGGACTCGCTTTCGAGAGAGGAGCGTATCGACTAC ACGCGGGCGGTCAAGTGTCTGCAAGCGAAGCCTTCCAGGAGGGGCAATGAGACGCTGGCACGCAGCCGATTCGAG GACTTTCTACTGACCCATATCGACAAGACCTTCACCATTCACTTTTCGGGGCTCCTGCTGCCGTGGCATCGGTAT TTCCTCTGGCTGTACGAACAAGCGCTGCGGAAAGAATGCGGCTATCAGGGCTATCAACCCTACTGGGACTGGTCC AAGTACGTGGCCAACCCGGGGGCGAGCTCCCTGTTTGACGGAAGCGACGTGTCCATGTCGGGCGACGGAGAGTCG ATTCCGCACGGGACCGTCGACGTCGTCATCCCCGGCGGACCTCCTCCCGTGCGCTACGTGCCGCGACCGCCGGGC AACGGAGGCGGCTGCGTCGTGGGCGGACCCTTCCAGGACATGACGGTTCACATCGGCGTATCGAGCGCGGGGGCA TCGGCCGTGCCGGAGGTATACTCGAAGCCTCGCTGTCTGACGCGGGATCTGCTACCTTTTATCCTCGAGCGACGC AACTCGTACCAGAACGTGACGGACCTAATCCTCAACAGTGCCGACATCGACGTCTTCTACCCGGCTGTCGACTCC AACAAGGGCGTTCACGGCGGAGGACACGGCTTCATCGGGGGAGAGAACCTCAACCAGTTCGTGTCGCCGAATGAT CCCGTCTTTTACCTCCACCACGCTATGCTCGATCGCGTCTGGGCCATCTGGCAGAGCAGGGACCCGGATACGCGA CAGTACGCCCTCAACGGGACCCTGACATGGGAGAACTATCCGCCTAGCCCTGACGCCACTGTCCAGGATCTCGTC GAAGTCGGGATTTTGGGGGCCGATACCGAGATCGGAGAGGTCATGTCGACGACTGAGGGGCCGCTATGTTACGTC TACGAG |
| Transcript | >Ophio5|105 ATGAAGCTCAACTACGGTCTGCTACTGGCGGGCCTGGCCGTGACAACAAACGGTCTGGCGACTGGCTACCACCGT CGAGGAGATGCGGCTCATCTCATGAGCCGACTCAGTCACGAATACAGACGGGACGTGATAGACTCCCTGCCGGGG AGCGTCTGTCGCCGTGAGGATATCGTGGTGCGAAAAGAATGGGACTCGCTTTCGAGAGAGGAGCGTATCGACTAC ACGCGGGCGGTCAAGTGTCTGCAAGCGAAGCCTTCCAGGAGGGGCAATGAGACGCTGGCACGCAGCCGATTCGAG GACTTTCTACTGACCCATATCGACAAGACCTTCACCATTCACTTTTCGGGGCTCCTGCTGCCGTGGCATCGGTAT TTCCTCTGGCTGTACGAACAAGCGCTGCGGAAAGAATGCGGCTATCAGGGCTATCAACCCTACTGGGACTGGTCC AAGTACGTGGCCAACCCGGGGGCGAGCTCCCTGTTTGACGGAAGCGACGTGTCCATGTCGGGCGACGGAGAGTCG ATTCCGCACGGGACCGTCGACGTCGTCATCCCCGGCGGACCTCCTCCCGTGCGCTACGTGCCGCGACCGCCGGGC AACGGAGGCGGCTGCGTCGTGGGCGGACCCTTCCAGGACATGACGGTTCACATCGGCGTATCGAGCGCGGGGGCA TCGGCCGTGCCGGAGGTATACTCGAAGCCTCGCTGTCTGACGCGGGATCTGCTACCTTTTATCCTCGAGCGACGC AACTCGTACCAGAACGTGACGGACCTAATCCTCAACAGTGCCGACATCGACGTCTTCTACCCGGCTGTCGACTCC AACAAGGGCGTTCACGGCGGAGGACACGGCTTCATCGGGGGAGAGAACCTCAACCAGTTCGTGTCGCCGAATGAT CCCGTCTTTTACCTCCACCACGCTATGCTCGATCGCGTCTGGGCCATCTGGCAGAGCAGGGACCCGGATACGCGA CAGTACGCCCTCAACGGGACCCTGACATGGGAGAACTATCCGCCTAGCCCTGACGCCACTGTCCAGGATCTCGTC GAAGTCGGGATTTTGGGGGCCGATACCGAGATCGGAGAGGTCATGTCGACGACTGAGGGGCCGCTATGTTACGTC TACGAGTAG |
| Gene | >Ophio5|105 ATGAAGCTCAACTACGGTCTGCTACTGGCGGGCCTGGCCGTGACAACAAACGGTCTGGCGACTGGCTACCACCGT CGAGGAGATGCGGCTCATCTCATGAGCCGACTCAGTCACGAATACAGACGGGACGTGATAGACTCCCTGCCGGGG AGCGTCTGTCGCCGTGAGGATATCGTGGTGCGAAAAGAATGGTGAGCAAGGCTTTATAACGATAACCAAAAAAAA AATAGTTTGGGATCCCGTCCGCTAACGGAGAATGGGCGGAAAATAAGGGACTCGCTTTCGAGAGAGGAGCGTATC GACTACACGCGGGCGGTCAAGTGTCTGCAAGCGAAGCCTTCCAGGAGGGGCAATGAGACGCTGGCACGCAGCCGA TTCGAGGACTTTCTACTGACCCATATCGACAAGACCTTCACCATTCACTTTTCGGGGCTCCTGCTGCCGTGGCAT CGGTATTTCCTCTGGCTGTACGAACAAGCGCTGCGGAAAGAATGCGGCTATCAGGGCTATCAACCCTACTGGGAC TGGTCCAAGTACGTGGCCAACCCGGGGGCGAGCTCCCTGTTTGACGGAAGCGACGTGTCCATGTCGGGCGACGGA GAGTCGATTCCGCACGGGACCGTCGACGTCGTCATCCCCGGCGGACCTCCTCCCGTGCGCTACGTGCCGCGACCG CCGGGCAACGGAGGCGGCTGCGTCGTGGGCGGACCCTTCCAGGACATGACGGTTCACATCGGCGTATCGAGCGCG GGGGCATCGGCCGTGCCGGAGGTATACTCGAAGCCTCGCTGTCTGACGCGGGATCTGCTACCTTTTATCCTCGAG CGACGCAACTCGTACCAGAACGTGACGGACCTAATCCTCAACAGTGCCGACATCGACGTCTTCTACCCGGCTGTC GACTCCAACAAGGGCGTTCACGGCGGAGGACACGGCTTCATCGGGGGAGAGAACCTCAACCAGTTCGTGTCGCCG AATGATCCCGTCTTTTACCTCCACCACGCTATGCTCGATCGCGTCTGGGCCATCTGGCAGAGCAGGGACCCGGAT ACGCGACAGTACGCCCTCAACGGGACCCTGACATGGGAGAACTGTACATGCCTCCTTTTTTTTTTCTCTCTCTCC CATTTTTTCTTTTTCTTCTTTTTTTTTTCCTTTTTATTTTTCTCTTGCACCCTCCTGTCACCGAAAATGAATGCG TCTGCTGACCCAAAGAGAGTATAGATCCGCCTAGCCCTGACGCCACTGTCCAGGATCTCGTCGAAGTCGGGATTT TGGGGGCCGATACCGAGATCGGAGAGGTCATGTCGACGACTGAGGGGCCGCTATGTTACGTCTACGAGTAG |