Protein ID | Ophio5|104 |
Gene name | |
Location | scaffold_100:858..2842 |
Strand | + |
Gene length (bp) | 1984 |
Transcript length (bp) | 1911 |
Coding sequence length (bp) | 1908 |
Protein length (aa) | 636 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 455 | 477 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 10.19 | 4.38 | 16.00 |
CcL | In ants, during behavior modification | 11.44 | 4.69 | 18.19 |
CcD | In ants, recently dead | 13.00 | 5.91 | 20.09 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.733054 | no |
SC16a | CcD | 0.419095 | no |
CcL | CcD | 0.699263 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|104 MILFAFRLLLLTVLVGRNTATPLGLHNASSLEPEHGIQTPTTSDIEHFLTQMTRFKGSDDNDGDDGDDGDDGDDG DDGDDGDDGDDGDHKGYLILKPDVGGQPASPSATPGASHPTTDSHLKRPAHENMPQHQYDASLITPEYTYEDLLA VEEPEYEQISEDHVDDTAIRRLHKRVMRAWARATEAEESIKAADNLEAVETTLRRAEDAAEEAFKITRELGLLKA DGLDTTEQQASFQSALLATMSARVTAASGRSQAAGLMAGILLPEQSKKQELMEKMATMNVSEAVHYRQRMREAAR QLNTQLINFHHYEELLVSRNGMLVMSWLRGESSDKPTTQQATYLRLWSETAAEAISREKRVLDIITKCARDAEAK LMESAATAMDLADKFSAAIDEAKARAARQAKEQAEKEAALLAQEITTRATASRQAKEEEAKRKVELAVEQLLEMN ERETPWWTSFIMGVSIVSAIIPAVVVVNALASQSGMTGAQTAGALGFTSLPLHVAIPVLKGALGIAETTLLGAIE PISVTASVAETSTAQTTSGKMASIVGELPIVSDALLPPLRVATSIFTRSLPSLDAADLLRRDDELREMVIDAVAD AIQDAVSAAERDMLGSEEHGLMDEDEGVGDGEGGAY |
Coding | >Ophio5|104 ATGATTCTCTTCGCCTTCCGCCTCCTCCTCCTGACTGTACTGGTCGGAAGAAATACGGCGACGCCCCTTGGCCTA CACAACGCATCATCCCTTGAGCCAGAACATGGCATCCAGACGCCAACGACCTCGGATATCGAACACTTTCTTACT CAAATGACGAGATTCAAGGGCTCAGATGATAATGATGGTGATGATGGTGATGATGGTGATGATGGTGATGATGGT GATGATGGTGATGATGGTGATGATGGTGATGATGGTGATCATAAAGGCTACTTGATTCTCAAGCCCGACGTCGGC GGCCAACCTGCCTCTCCCTCGGCAACGCCGGGTGCCTCTCATCCGACAACAGATTCACACCTGAAGCGCCCCGCT CACGAGAACATGCCTCAGCATCAATACGACGCCTCACTCATCACGCCCGAGTACACCTACGAGGATTTGCTAGCG GTTGAAGAGCCCGAGTACGAACAGATCTCAGAAGACCATGTTGATGACACTGCTATACGACGCTTGCATAAGCGA GTAATGCGTGCCTGGGCTAGGGCTACTGAGGCCGAGGAGAGCATCAAGGCAGCAGACAACTTGGAGGCGGTGGAA ACGACGTTGAGAAGAGCAGAGGATGCCGCAGAGGAAGCATTCAAGATTACGAGGGAACTAGGACTCTTGAAGGCT GACGGTCTTGACACGACCGAACAGCAGGCGAGCTTCCAGTCGGCCTTGCTTGCGACGATGAGCGCCAGAGTGACG GCAGCCAGCGGCCGCAGTCAGGCGGCGGGCTTGATGGCCGGCATTTTGCTCCCCGAACAGAGCAAGAAGCAGGAG CTGATGGAGAAGATGGCGACGATGAATGTAAGCGAGGCGGTCCACTATCGCCAGAGAATGCGAGAGGCAGCCAGG CAACTGAACACACAACTCATCAACTTCCACCACTACGAAGAGCTCCTCGTCAGTCGCAACGGGATGCTGGTCATG TCTTGGCTGAGAGGCGAGTCGAGTGACAAGCCGACGACGCAACAAGCGACATACCTCCGGTTATGGTCCGAAACC GCGGCCGAGGCCATCTCGAGAGAAAAGAGGGTGCTGGACATAATCACCAAATGTGCCAGAGACGCGGAAGCGAAA CTAATGGAATCGGCGGCCACGGCCATGGACTTGGCGGACAAGTTCTCGGCCGCCATCGACGAGGCCAAAGCCAGG GCAGCCCGACAAGCCAAGGAACAGGCAGAGAAGGAAGCGGCATTGCTGGCACAGGAGATCACGACGAGAGCAACG GCCTCGCGGCAAGCCAAGGAGGAAGAGGCGAAAAGAAAAGTCGAGTTGGCGGTGGAACAGCTGCTAGAGATGAAC GAGAGGGAGACGCCATGGTGGACCAGCTTCATCATGGGAGTCAGCATCGTGAGCGCCATCATACCTGCCGTCGTC GTCGTTAATGCGCTCGCGTCACAAAGTGGCATGACCGGGGCTCAAACGGCGGGGGCCTTGGGCTTCACATCCTTG CCCCTACATGTTGCCATCCCGGTGCTTAAAGGGGCTTTAGGCATCGCCGAGACGACCCTTCTAGGGGCCATAGAG CCTATTTCCGTGACGGCGTCGGTGGCGGAAACGTCGACGGCGCAGACGACGTCGGGGAAGATGGCCAGCATCGTC GGCGAGCTACCCATCGTGTCCGACGCTCTCTTGCCGCCCCTTCGCGTCGCCACGTCCATCTTCACCCGCTCTTTG CCGTCTCTCGATGCCGCCGATCTGTTGAGGAGGGATGATGAGCTTCGGGAAATGGTGATTGATGCCGTTGCCGAC GCTATCCAAGACGCTGTATCGGCTGCCGAGAGGGATATGCTCGGCTCGGAAGAGCACGGATTGATGGACGAGGAC GAGGGAGTTGGTGATGGAGAGGGAGGAGCCTAT |
Transcript | >Ophio5|104 ATGATTCTCTTCGCCTTCCGCCTCCTCCTCCTGACTGTACTGGTCGGAAGAAATACGGCGACGCCCCTTGGCCTA CACAACGCATCATCCCTTGAGCCAGAACATGGCATCCAGACGCCAACGACCTCGGATATCGAACACTTTCTTACT CAAATGACGAGATTCAAGGGCTCAGATGATAATGATGGTGATGATGGTGATGATGGTGATGATGGTGATGATGGT GATGATGGTGATGATGGTGATGATGGTGATGATGGTGATCATAAAGGCTACTTGATTCTCAAGCCCGACGTCGGC GGCCAACCTGCCTCTCCCTCGGCAACGCCGGGTGCCTCTCATCCGACAACAGATTCACACCTGAAGCGCCCCGCT CACGAGAACATGCCTCAGCATCAATACGACGCCTCACTCATCACGCCCGAGTACACCTACGAGGATTTGCTAGCG GTTGAAGAGCCCGAGTACGAACAGATCTCAGAAGACCATGTTGATGACACTGCTATACGACGCTTGCATAAGCGA GTAATGCGTGCCTGGGCTAGGGCTACTGAGGCCGAGGAGAGCATCAAGGCAGCAGACAACTTGGAGGCGGTGGAA ACGACGTTGAGAAGAGCAGAGGATGCCGCAGAGGAAGCATTCAAGATTACGAGGGAACTAGGACTCTTGAAGGCT GACGGTCTTGACACGACCGAACAGCAGGCGAGCTTCCAGTCGGCCTTGCTTGCGACGATGAGCGCCAGAGTGACG GCAGCCAGCGGCCGCAGTCAGGCGGCGGGCTTGATGGCCGGCATTTTGCTCCCCGAACAGAGCAAGAAGCAGGAG CTGATGGAGAAGATGGCGACGATGAATGTAAGCGAGGCGGTCCACTATCGCCAGAGAATGCGAGAGGCAGCCAGG CAACTGAACACACAACTCATCAACTTCCACCACTACGAAGAGCTCCTCGTCAGTCGCAACGGGATGCTGGTCATG TCTTGGCTGAGAGGCGAGTCGAGTGACAAGCCGACGACGCAACAAGCGACATACCTCCGGTTATGGTCCGAAACC GCGGCCGAGGCCATCTCGAGAGAAAAGAGGGTGCTGGACATAATCACCAAATGTGCCAGAGACGCGGAAGCGAAA CTAATGGAATCGGCGGCCACGGCCATGGACTTGGCGGACAAGTTCTCGGCCGCCATCGACGAGGCCAAAGCCAGG GCAGCCCGACAAGCCAAGGAACAGGCAGAGAAGGAAGCGGCATTGCTGGCACAGGAGATCACGACGAGAGCAACG GCCTCGCGGCAAGCCAAGGAGGAAGAGGCGAAAAGAAAAGTCGAGTTGGCGGTGGAACAGCTGCTAGAGATGAAC GAGAGGGAGACGCCATGGTGGACCAGCTTCATCATGGGAGTCAGCATCGTGAGCGCCATCATACCTGCCGTCGTC GTCGTTAATGCGCTCGCGTCACAAAGTGGCATGACCGGGGCTCAAACGGCGGGGGCCTTGGGCTTCACATCCTTG CCCCTACATGTTGCCATCCCGGTGCTTAAAGGGGCTTTAGGCATCGCCGAGACGACCCTTCTAGGGGCCATAGAG CCTATTTCCGTGACGGCGTCGGTGGCGGAAACGTCGACGGCGCAGACGACGTCGGGGAAGATGGCCAGCATCGTC GGCGAGCTACCCATCGTGTCCGACGCTCTCTTGCCGCCCCTTCGCGTCGCCACGTCCATCTTCACCCGCTCTTTG CCGTCTCTCGATGCCGCCGATCTGTTGAGGAGGGATGATGAGCTTCGGGAAATGGTGATTGATGCCGTTGCCGAC GCTATCCAAGACGCTGTATCGGCTGCCGAGAGGGATATGCTCGGCTCGGAAGAGCACGGATTGATGGACGAGGAC GAGGGAGTTGGTGATGGAGAGGGAGGAGCCTATTGA |
Gene | >Ophio5|104 ATGATTCTCTTCGCCTTCCGCCTCCTCCTCCTGACTGTACTGGTCGGAAGAAATACGGCGACGCCCCTTGGCCTA CACAACGCATCATCCCTTGAGCCAGAACATGGCATCCAGACGCCAACGACCTCGGATATCGAACACTTTCTTACT CAAATGGTAATGGCGGGACCTCGTCAACGACCCAAAAATATAGAAAAAAAAAATTGCATGACAAAAACAAACTAA CTAGACGAGATTCAAGGGCTCAGATGATAATGATGGTGATGATGGTGATGATGGTGATGATGGTGATGATGGTGA TGATGGTGATGATGGTGATGATGGTGATGATGGTGATCATAAAGGCTACTTGATTCTCAAGCCCGACGTCGGCGG CCAACCTGCCTCTCCCTCGGCAACGCCGGGTGCCTCTCATCCGACAACAGATTCACACCTGAAGCGCCCCGCTCA CGAGAACATGCCTCAGCATCAATACGACGCCTCACTCATCACGCCCGAGTACACCTACGAGGATTTGCTAGCGGT TGAAGAGCCCGAGTACGAACAGATCTCAGAAGACCATGTTGATGACACTGCTATACGACGCTTGCATAAGCGAGT AATGCGTGCCTGGGCTAGGGCTACTGAGGCCGAGGAGAGCATCAAGGCAGCAGACAACTTGGAGGCGGTGGAAAC GACGTTGAGAAGAGCAGAGGATGCCGCAGAGGAAGCATTCAAGATTACGAGGGAACTAGGACTCTTGAAGGCTGA CGGTCTTGACACGACCGAACAGCAGGCGAGCTTCCAGTCGGCCTTGCTTGCGACGATGAGCGCCAGAGTGACGGC AGCCAGCGGCCGCAGTCAGGCGGCGGGCTTGATGGCCGGCATTTTGCTCCCCGAACAGAGCAAGAAGCAGGAGCT GATGGAGAAGATGGCGACGATGAATGTAAGCGAGGCGGTCCACTATCGCCAGAGAATGCGAGAGGCAGCCAGGCA ACTGAACACACAACTCATCAACTTCCACCACTACGAAGAGCTCCTCGTCAGTCGCAACGGGATGCTGGTCATGTC TTGGCTGAGAGGCGAGTCGAGTGACAAGCCGACGACGCAACAAGCGACATACCTCCGGTTATGGTCCGAAACCGC GGCCGAGGCCATCTCGAGAGAAAAGAGGGTGCTGGACATAATCACCAAATGTGCCAGAGACGCGGAAGCGAAACT AATGGAATCGGCGGCCACGGCCATGGACTTGGCGGACAAGTTCTCGGCCGCCATCGACGAGGCCAAAGCCAGGGC AGCCCGACAAGCCAAGGAACAGGCAGAGAAGGAAGCGGCATTGCTGGCACAGGAGATCACGACGAGAGCAACGGC CTCGCGGCAAGCCAAGGAGGAAGAGGCGAAAAGAAAAGTCGAGTTGGCGGTGGAACAGCTGCTAGAGATGAACGA GAGGGAGACGCCATGGTGGACCAGCTTCATCATGGGAGTCAGCATCGTGAGCGCCATCATACCTGCCGTCGTCGT CGTTAATGCGCTCGCGTCACAAAGTGGCATGACCGGGGCTCAAACGGCGGGGGCCTTGGGCTTCACATCCTTGCC CCTACATGTTGCCATCCCGGTGCTTAAAGGGGCTTTAGGCATCGCCGAGACGACCCTTCTAGGGGCCATAGAGCC TATTTCCGTGACGGCGTCGGTGGCGGAAACGTCGACGGCGCAGACGACGTCGGGGAAGATGGCCAGCATCGTCGG CGAGCTACCCATCGTGTCCGACGCTCTCTTGCCGCCCCTTCGCGTCGCCACGTCCATCTTCACCCGCTCTTTGCC GTCTCTCGATGCCGCCGATCTGTTGAGGAGGGATGATGAGCTTCGGGAAATGGTGATTGATGCCGTTGCCGACGC TATCCAAGACGCTGTATCGGCTGCCGAGAGGGATATGCTCGGCTCGGAAGAGCACGGATTGATGGACGAGGACGA GGGAGTTGGTGATGGAGAGGGAGGAGCCTATTGA |