Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF04851
Short nameResIII
Long nameType III restriction enzyme, res subunit
Proteins with at least one of this domain37
Total domain count39
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ophio5|1681 PF00270 DEAD DEAD/DEAH box helicase 3.4E-25 158 327
PF04851 ResIII Type III restriction enzyme, res subunit 7.8E-06 164 313
PF00271 Helicase_C Helicase conserved C-terminal domain 1.4E-11 393 491
Ophio5|1854 PF00270 DEAD DEAD/DEAH box helicase 5.2E-40 175 361
PF04851 ResIII Type III restriction enzyme, res subunit 2.8E-05 190 359
PF00271 Helicase_C Helicase conserved C-terminal domain 7.2E-28 421 528
Ophio5|2152 PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-09 180 340
PF00176 SNF2-rel_dom SNF2-related domain 9.1E-82 190 464
PF00271 Helicase_C Helicase conserved C-terminal domain 8.1E-17 488 599
PF09110 HAND HAND 1.4E-34 752 856
PF09111 SLIDE SLIDE 9.7E-44 914 1029
Ophio5|2244 PF00270 DEAD DEAD/DEAH box helicase 6.4E-48 106 270
PF04851 ResIII Type III restriction enzyme, res subunit 8.6E-06 126 267
PF00271 Helicase_C Helicase conserved C-terminal domain 7.2E-23 355 450
PF08147 DBP10CT DBP10CT (NUC160) domain 1.3E-20 718 785
Ophio5|2902 PF12796 Ank_2 Ankyrin repeats (3 copies) 8.0E-08 8 76
PF04851 ResIII Type III restriction enzyme, res subunit 2.8E-07 940 1111
PF00270 DEAD DEAD/DEAH box helicase 6.4E-22 943 1115
PF00271 Helicase_C Helicase conserved C-terminal domain 1.4E-14 1155 1261
PF16124 RecQ_Zn_bind RecQ zinc-binding 9.8E-15 1274 1339
PF09382 RQC RQC domain 7.1E-14 1345 1457
Ophio5|2960 PF04851 ResIII Type III restriction enzyme, res subunit 8.8E-14 58 225
PF00270 DEAD DEAD/DEAH box helicase 1.6E-17 60 227
PF00271 Helicase_C Helicase conserved C-terminal domain 3.9E-15 424 529
PF03368 Dicer_dimer Dicer dimerisation domain 6.8E-20 597 688
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 2.2E-11 982 1105
PF00636 Ribonuclease_3 Ribonuclease III domain 2.0E-20 984 1093
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 1.9E-09 1148 1316
PF00636 Ribonuclease_3 Ribonuclease III domain 4.8E-16 1170 1308
Ophio5|2975 PF00270 DEAD DEAD/DEAH box helicase 2.0E-30 229 445
PF04851 ResIII Type III restriction enzyme, res subunit 4.1E-05 229 412
PF00271 Helicase_C Helicase conserved C-terminal domain 9.1E-20 509 627
Ophio5|3013 PF04851 ResIII Type III restriction enzyme, res subunit 1.4E-13 41 122
PF00270 DEAD DEAD/DEAH box helicase 3.8E-06 44 115
PF00271 Helicase_C Helicase conserved C-terminal domain 4.9E-14 240 339
Ophio5|382 PF00270 DEAD DEAD/DEAH box helicase 2.6E-17 160 306
PF04851 ResIII Type III restriction enzyme, res subunit 2.5E-05 170 305
PF00271 Helicase_C Helicase conserved C-terminal domain 3.6E-05 478 557
PF13234 rRNA_proc-arch rRNA-processing arch domain 3.4E-91 611 888
PF08148 DSHCT DSHCT (NUC185) domain 2.1E-48 916 1084
Ophio5|3876 PF13892 DBINO DNA-binding domain 2.1E-48 596 727
PF04851 ResIII Type III restriction enzyme, res subunit 7.1E-07 836 1004
PF00176 SNF2-rel_dom SNF2-related domain 3.3E-65 854 1139
PF00271 Helicase_C Helicase conserved C-terminal domain 5.6E-20 1404 1516
Ophio5|4165 PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-08 837 997
PF00176 SNF2-rel_dom SNF2-related domain 1.0E-69 855 1136
PF00271 Helicase_C Helicase conserved C-terminal domain 5.5E-18 1400 1512
Ophio5|4201 PF00270 DEAD DEAD/DEAH box helicase 1.3E-16 328 430
PF04851 ResIII Type III restriction enzyme, res subunit 7.6E-08 330 441
PF00270 DEAD DEAD/DEAH box helicase 1.6E-13 476 563
PF00271 Helicase_C Helicase conserved C-terminal domain 2.5E-18 691 791
Ophio5|4293 PF08797 HIRAN HIRAN domain 1.1E-22 156 273
PF04851 ResIII Type III restriction enzyme, res subunit 2.5E-05 405 667
PF00176 SNF2-rel_dom SNF2-related domain 2.0E-68 409 802
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 6.0E-05 868 912
PF00271 Helicase_C Helicase conserved C-terminal domain 3.6E-13 967 1073
Ophio5|4792 PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-08 189 407
PF00176 SNF2-rel_dom SNF2-related domain 1.3E-62 192 528
PF00271 Helicase_C Helicase conserved C-terminal domain 8.9E-11 655 766
Ophio5|4944 PF00270 DEAD DEAD/DEAH box helicase 1.3E-47 145 315
PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-05 165 308
PF00271 Helicase_C Helicase conserved C-terminal domain 1.4E-30 357 463
Ophio5|5631 PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-05 165 337
PF00176 SNF2-rel_dom SNF2-related domain 1.5E-50 183 449
PF00271 Helicase_C Helicase conserved C-terminal domain 4.5E-19 542 654
PF14773 VIGSSK Helicase-associated putative binding domain, C-terminal 1.1E-26 777 836
Ophio5|574 PF00270 DEAD DEAD/DEAH box helicase 8.7E-40 110 284
PF04851 ResIII Type III restriction enzyme, res subunit 5.2E-05 131 279
PF00271 Helicase_C Helicase conserved C-terminal domain 9.4E-29 331 436
Ophio5|585 PF08880 QLQ QLQ 1.8E-10 139 172
PF07529 HSA HSA domain 9.0E-18 376 446
PF04851 ResIII Type III restriction enzyme, res subunit 9.1E-09 541 700
PF00176 SNF2-rel_dom SNF2-related domain 3.9E-78 544 837
PF00271 Helicase_C Helicase conserved C-terminal domain 7.5E-19 861 974
PF14619 SnAC Snf2-ATP coupling, chromatin remodelling complex 4.2E-16 1071 1137
PF00439 Bromodomain Bromodomain 3.0E-18 1278 1350
Ophio5|6191 PF09416 UPF1_Zn_bind RNA helicase (UPF2 interacting domain) 5.7E-73 90 240
PF18141 UPF1_1B_dom RNA helicase UPF1, 1B domain 3.7E-33 294 388
PF04851 ResIII Type III restriction enzyme, res subunit 5.2E-06 445 515
PF13086 AAA_11 AAA domain 7.3E-23 445 546
PF13604 AAA_30 AAA domain 6.0E-12 445 643
PF13245 AAA_19 AAA domain 2.5E-10 449 641
PF13086 AAA_11 AAA domain 1.5E-31 544 647
PF13087 AAA_12 AAA domain 7.8E-59 654 850
Ophio5|6345 PF00270 DEAD DEAD/DEAH box helicase 1.1E-44 49 213
PF04851 ResIII Type III restriction enzyme, res subunit 5.8E-05 62 208
PF00271 Helicase_C Helicase conserved C-terminal domain 7.9E-31 250 358
Ophio5|6496 PF04851 ResIII Type III restriction enzyme, res subunit 3.8E-05 63 236
PF00270 DEAD DEAD/DEAH box helicase 5.1E-22 66 241
PF00271 Helicase_C Helicase conserved C-terminal domain 6.7E-16 278 385
Ophio5|658 PF04851 ResIII Type III restriction enzyme, res subunit 1.9E-06 831 1017
PF00176 SNF2-rel_dom SNF2-related domain 1.6E-44 849 1155
PF00271 Helicase_C Helicase conserved C-terminal domain 6.0E-22 1207 1314
Ophio5|6754 PF00270 DEAD DEAD/DEAH box helicase 2.0E-38 80 248
PF04851 ResIII Type III restriction enzyme, res subunit 1.5E-07 96 244
PF00271 Helicase_C Helicase conserved C-terminal domain 5.3E-24 286 394
Ophio5|6794 PF00270 DEAD DEAD/DEAH box helicase 5.5E-46 81 250
PF04851 ResIII Type III restriction enzyme, res subunit 2.2E-07 95 243
PF00271 Helicase_C Helicase conserved C-terminal domain 6.7E-24 287 397
PF13959 DUF4217 Domain of unknown function (DUF4217) 1.9E-23 439 499
Ophio5|7295 PF04851 ResIII Type III restriction enzyme, res subunit 3.2E-14 126 295
PF00270 DEAD DEAD/DEAH box helicase 1.3E-13 128 296
PF00271 Helicase_C Helicase conserved C-terminal domain 9.4E-16 456 567
PF03368 Dicer_dimer Dicer dimerisation domain 4.4E-19 646 729
PF00636 Ribonuclease_3 Ribonuclease III domain 2.0E-19 1070 1177
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 5.9E-14 1249 1397
PF00636 Ribonuclease_3 Ribonuclease III domain 2.0E-17 1270 1384
Ophio5|7390 PF04851 ResIII Type III restriction enzyme, res subunit 4.7E-23 156 312
PF00270 DEAD DEAD/DEAH box helicase 5.9E-17 157 317
PF00271 Helicase_C Helicase conserved C-terminal domain 9.4E-22 514 622
Ophio5|7589 PF00176 SNF2-rel_dom SNF2-related domain 2.2E-72 330 708
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-06 395 576
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-15 741 842
Ophio5|7807 PF00270 DEAD DEAD/DEAH box helicase 1.4E-41 135 312
PF04851 ResIII Type III restriction enzyme, res subunit 6.9E-05 148 289
PF00271 Helicase_C Helicase conserved C-terminal domain 4.2E-18 361 466
Ophio5|8096 PF00270 DEAD DEAD/DEAH box helicase 6.7E-46 115 286
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-06 130 278
PF00271 Helicase_C Helicase conserved C-terminal domain 2.3E-24 332 433
PF13959 DUF4217 Domain of unknown function (DUF4217) 6.9E-20 475 535
Ophio5|8248 PF04851 ResIII Type III restriction enzyme, res subunit 3.6E-08 363 504
PF00270 DEAD DEAD/DEAH box helicase 1.4E-23 367 538
PF00271 Helicase_C Helicase conserved C-terminal domain 7.1E-09 598 706
PF09369 MZB MrfA Zn-binding domain 3.4E-22 970 1059
Ophio5|8290 PF13625 Helicase_C_3 Helicase conserved C-terminal domain 6.3E-34 102 226
PF04851 ResIII Type III restriction enzyme, res subunit 6.0E-15 341 498
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 8.5E-125 524 759
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-11 568 674
Ophio5|8406 PF00270 DEAD DEAD/DEAH box helicase 2.8E-26 275 461
PF04851 ResIII Type III restriction enzyme, res subunit 5.4E-09 275 458
PF02889 Sec63 Sec63 Brl domain 5.1E-79 786 1089
PF00270 DEAD DEAD/DEAH box helicase 2.0E-20 1135 1297
PF04851 ResIII Type III restriction enzyme, res subunit 9.5E-10 1140 1267
PF00271 Helicase_C Helicase conserved C-terminal domain 4.0E-06 1412 1498
PF02889 Sec63 Sec63 Brl domain 1.2E-56 1625 1935
Ophio5|8479 PF00176 SNF2-rel_dom SNF2-related domain 3.7E-50 418 751
PF04851 ResIII Type III restriction enzyme, res subunit 2.6E-08 421 585
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 5.7E-06 765 804
PF00271 Helicase_C Helicase conserved C-terminal domain 4.6E-15 843 957
Ophio5|858 PF18149 Helicase_PWI N-terminal helicase PWI domain 1.6E-33 289 403
PF00270 DEAD DEAD/DEAH box helicase 3.1E-27 526 701
PF04851 ResIII Type III restriction enzyme, res subunit 2.5E-14 529 700
PF00271 Helicase_C Helicase conserved C-terminal domain 4.4E-07 764 904
PF02889 Sec63 Sec63 Brl domain 6.6E-95 1026 1332
PF00270 DEAD DEAD/DEAH box helicase 1.3E-18 1377 1543
PF04851 ResIII Type III restriction enzyme, res subunit 2.7E-05 1379 1511
PF02889 Sec63 Sec63 Brl domain 7.3E-68 1862 2185
Ophio5|8607 PF00270 DEAD DEAD/DEAH box helicase 2.5E-15 744 905
PF04851 ResIII Type III restriction enzyme, res subunit 8.6E-11 749 904
PF00271 Helicase_C Helicase conserved C-terminal domain 9.3E-08 1251 1323
Ophio5|947 PF00176 SNF2-rel_dom SNF2-related domain 2.6E-29 354 547
PF04851 ResIII Type III restriction enzyme, res subunit 1.0E-07 381 543
Ophio5|954 PF04851 ResIII Type III restriction enzyme, res subunit 4.9E-09 137 302
PF00176 SNF2-rel_dom SNF2-related domain 4.2E-70 152 415
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-19 625 737

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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