Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|07444
Gene name
Location	scaffold_12:9788..11142
Strand	+
Gene length (bp)	1354
Transcript length (bp)	1035
Coding sequence length (bp)	1035
Protein length (aa)	345

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 32	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	45	67	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	0.11	0.0	0.38
Alive	In ants, during behavior modification	0.02	0.0	0.15
Dead	In ants, recently dead	0.08	0.0	0.28

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	1.0	no
Alive	Dead	1.0	no
Dead	Fungus	1.0	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|07444 MQHEEEVDHKSGGLPPQYEDMDFGESRTTKTAAWWKPRYWRKRTWAIVAGVFIVIIAVVVAVAVALSGLTNYPDY KAVSYALRDTYEGENFFDQFNYFTGWDPTKGFVHYVPRPQAQQLNLTYASTNTAIVRVDTSVGPGSRPDASTGRF SVRLESKKTPRRDRHHGVDQQRAGGNQMSLHTADGCSMAVTRKMKGHALHNDCNQASNGNAGCGVTGGRNSFGPA LNAAGGSVMAVEWREAGIRVWQFGRGDVPSDVVAKRPNPAGWGTATADFPNTRCGIGSMFRNNSIVIDIDLCGDM VYGTWDRSSCPSTCTDLVSNQPALFKTAYWEFGSFQVYQPASPS*
Coding	>Ophcf2\|07444 ATGCAGCACGAAGAAGAAGTCGATCACAAGTCGGGGGGTCTTCCCCCCCAATACGAGGACATGGACTTTGGCGAG TCACGGACGACGAAGACGGCGGCTTGGTGGAAGCCGCGGTACTGGCGGAAGCGAACCTGGGCTATTGTCGCGGGC GTCTTCATCGTCATCATTGCCGTCGTTGTGGCTGTTGCCGTTGCCTTGTCTGGCTTGACGAATTATCCGGATTAT AAGGCTGTGTCGTACGCTTTGCGAGATACCTATGAGGGGGAAAACTTCTTTGATCAGTTCAATTACTTTACCGGC TGGGATCCCACCAAGGGCTTCGTTCATTATGTTCCACGACCGCAGGCTCAACAGCTGAACCTAACGTACGCGTCA ACCAACACAGCCATCGTGAGAGTCGACACCTCAGTCGGTCCCGGATCCAGACCCGATGCCTCAACAGGCCGCTTC TCCGTAAGACTCGAGTCAAAGAAGACACCACGGAGAGATCGACATCATGGAGTCGATCAACAACGCGCAGGCGGG AACCAGATGTCGCTGCATACGGCGGATGGGTGTTCCATGGCCGTGACGCGCAAGATGAAGGGCCACGCGCTGCAC AATGACTGCAATCAGGCTAGTAACGGCAACGCCGGCTGTGGCGTCACCGGCGGGCGCAACTCGTTTGGTCCTGCT CTGAACGCTGCTGGCGGGAGCGTCATGGCGGTTGAGTGGCGAGAAGCCGGCATTCGGGTTTGGCAGTTTGGTCGT GGAGATGTGCCGTCTGATGTTGTGGCCAAGAGGCCTAACCCTGCTGGTTGGGGCACTGCCACGGCTGATTTTCCG AATACTCGCTGTGGCATTGGCTCGATGTTCCGGAACAACTCCATCGTCATCGATATCGATCTGTGCGGTGATATG GTATATGGCACCTGGGATCGTTCGTCGTGCCCGAGCACCTGCACTGATCTCGTGTCCAACCAGCCCGCCCTCTTC AAGACGGCGTACTGGGAGTTTGGCTCCTTTCAAGTCTACCAACCGGCGTCTCCGTCGTGA
Transcript	>Ophcf2\|07444 ATGCAGCACGAAGAAGAAGTCGATCACAAGTCGGGGGGTCTTCCCCCCCAATACGAGGACATGGACTTTGGCGAG TCACGGACGACGAAGACGGCGGCTTGGTGGAAGCCGCGGTACTGGCGGAAGCGAACCTGGGCTATTGTCGCGGGC GTCTTCATCGTCATCATTGCCGTCGTTGTGGCTGTTGCCGTTGCCTTGTCTGGCTTGACGAATTATCCGGATTAT AAGGCTGTGTCGTACGCTTTGCGAGATACCTATGAGGGGGAAAACTTCTTTGATCAGTTCAATTACTTTACCGGC TGGGATCCCACCAAGGGCTTCGTTCATTATGTTCCACGACCGCAGGCTCAACAGCTGAACCTAACGTACGCGTCA ACCAACACAGCCATCGTGAGAGTCGACACCTCAGTCGGTCCCGGATCCAGACCCGATGCCTCAACAGGCCGCTTC TCCGTAAGACTCGAGTCAAAGAAGACACCACGGAGAGATCGACATCATGGAGTCGATCAACAACGCGCAGGCGGG AACCAGATGTCGCTGCATACGGCGGATGGGTGTTCCATGGCCGTGACGCGCAAGATGAAGGGCCACGCGCTGCAC AATGACTGCAATCAGGCTAGTAACGGCAACGCCGGCTGTGGCGTCACCGGCGGGCGCAACTCGTTTGGTCCTGCT CTGAACGCTGCTGGCGGGAGCGTCATGGCGGTTGAGTGGCGAGAAGCCGGCATTCGGGTTTGGCAGTTTGGTCGT GGAGATGTGCCGTCTGATGTTGTGGCCAAGAGGCCTAACCCTGCTGGTTGGGGCACTGCCACGGCTGATTTTCCG AATACTCGCTGTGGCATTGGCTCGATGTTCCGGAACAACTCCATCGTCATCGATATCGATCTGTGCGGTGATATG GTATATGGCACCTGGGATCGTTCGTCGTGCCCGAGCACCTGCACTGATCTCGTGTCCAACCAGCCCGCCCTCTTC AAGACGGCGTACTGGGAGTTTGGCTCCTTTCAAGTCTACCAACCGGCGTCTCCGTCGTGA
Gene	>Ophcf2\|07444 ATGCAGCACGAAGAAGAAGTCGATCACAAGTCGGGGGGTCTTCCCCCCCAATACGAGGACATGGACTTTGGCGAG TCACGGACGACGAAGACGGCGGCTTGGTGGAAGCCGCGGTACTGGCGGAAGCGAACCTGGGCTATTGTCGCGGGC GTCTTCATCGTCATCATTGCCGTCGTTGTGGCTGTTGCCGTTGCCTTGTCTGGCTTGACGAATTATCCGGATTAT AAGGCTGTGTCGTACGCTTTGCGAGATACCTGTGAGTTGGTGGTGGTTTGCTTGCTTGGATGGCGACTCTGACAT TCATCTGATTTAGATGAGGGGGAAAACTTCTTTGATCAGTTCAATTACTTTACCGGCTGGGATCCCAGTTAGTTT CCCCATGGTTGTCTTGAGGTTTCCTGGGCTGACGAGGAGGTGCCATTCAGCCAAGGGCTTCGTTCATTATGTTCC ACGACCGCAGGCTCAACAGCTGGTAAGAGACCAGAGATGAAAAGACGCCATGAGAAAAGCTGACGGTCCGATGTA GAACCTAACGTACGCGTCAACCAACACAGCCATCGTGAGAGTCGACACCTCAGTCGGTCCCGGATCCAGACCCGA TGCCTCAACAGGCCGCTTCTCCGTAAGACTCGAGTCAAAGAAGACGTACGGAGGCGGCCTCTTCGTCTTCGACGT CAAGCACACGCCTCACGCTTGCGGCACCTGGCCAGCCCTCTGGCTAACGGACCCATCCACTGGCCAGACCACGGA GAGATCGACATCATGGAGTCGATCAACAACGCGCAGGCGGGAACCAGATGTCGCTGCATACGGCGGATGGGTGTT CCATGGCCGTGACGCGCAAGATGAAGGGCCACGCGCTGCACAATGACTGCAATCAGGCTAGTAACGGCAACGCCG GCTGTGGCGTCACCGGCGGGCGCAACTCGTTTGGTCCTGCTCTGAACGCTGCTGGCGGGAGCGTCATGGCGGTTG AGTGGCGAGAAGCCGGCATTCGGGTTTGGCAGTTTGGTCGTGGAGATGTGCCGTCTGATGTTGTGGCCAAGAGGC CTAACCCTGCTGGTTGGGGCACTGCCACGGCTGATTTTCCGAATACTCGCTGTGGCATTGGCTCGATGTTCCGGA ACAACTCCATCGTCATCGATATCGATCTGTGCGGTGATATGGTATATGGCACCTGGGATCGTTCGTCGTGTGAGT CGTCATCTTTTTCCGTCGTCATTCTTCTGAGCTGACCCTGGAGTCAGGCCCGAGCACCTGCACTGATCTCGTGTC CAACCAGCCCGCCCTCTTCAAGACGGCGTACTGGGAGTTTGGCTCCTTTCAAGTCTACCAACCGGCGTCTCCGTC GTGA

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