Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07378
Gene name
Locationscaffold_09:1349463..1350629
Strand-
Gene length (bp)1166
Transcript length (bp)1050
Coding sequence length (bp)1050
Protein length (aa) 350

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08423 Rad51 Rad51 1.2E-127 86 340
PF13481 AAA_25 AAA domain 2.3E-09 107 270
PF00154 RecA recA bacterial DNA recombination protein 2.7E-08 96 308

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0003697 single-stranded DNA binding Yes
GO:0006281 DNA repair Yes
GO:0006139 nucleobase-containing compound metabolic process No
GO:0050896 response to stimulus No
GO:1901360 organic cyclic compound metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901265 nucleoside phosphate binding No
GO:0006259 DNA metabolic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0005488 binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0051716 cellular response to stimulus No
GO:0044238 primary metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0008152 metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0043168 anion binding No
GO:0003676 nucleic acid binding No
GO:0009987 cellular process No
GO:0044237 cellular metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0097367 carbohydrate derivative binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0030554 adenyl nucleotide binding No
GO:0008150 biological_process No
GO:0043167 ion binding No
GO:0036094 small molecule binding No
GO:0006950 response to stress No
GO:0000166 nucleotide binding No
GO:0006725 cellular aromatic compound metabolic process No
GO:0006974 cellular response to DNA damage stimulus No
GO:0003677 DNA binding No
GO:0090304 nucleic acid metabolic process No
GO:0017076 purine nucleotide binding No
GO:0032553 ribonucleotide binding No
GO:0003674 molecular_function No
GO:0006807 nitrogen compound metabolic process No
GO:0033554 cellular response to stress No
GO:0071704 organic substance metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.4148 0.7515 0.0085 0.0678 0.1582 0.0188 0.0488 0.1358 0.0337 0.0201

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1998
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7436
Ophiocordyceps australis map64 (Brazil) OphauB2|7804
Ophiocordyceps camponoti-floridani Ophcf2|07378 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|3212
Ophiocordyceps kimflemingae Ophio5|5143
Ophiocordyceps subramaniannii Hirsu2|2235

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07378
MSGEGYDEAPMEDESGAVGPGAPTPLSALEGVAGLTKRDIELVVGGGFNTVESVAYTPRRMLEQIKGISEQKATK
ILGEASKLVPMGFTTATEMHQRRSELISITTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPF
DMGGGEGKCLYIDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYNSDHQLQLLNQAAAMMCETRFSLLVVDS
ATALYRTDFCGRGELSNRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSAMFNPDPKKPIGGNIMAHAS
TTRISLKKGRGETRVAKIYDSPCLPESDTLFAINEDGIGDPSPKDMEKD*
Coding >Ophcf2|07378
ATGAGTGGCGAAGGCTATGATGAGGCTCCGATGGAGGATGAAAGCGGCGCAGTCGGTCCTGGCGCGCCGACGCCA
CTCTCAGCTCTCGAGGGCGTCGCGGGCTTGACGAAGCGTGATATTGAGCTGGTCGTCGGGGGAGGCTTCAACACA
GTCGAGTCCGTTGCGTACACTCCGCGGAGGATGCTGGAACAGATCAAGGGCATCTCGGAGCAGAAGGCGACTAAA
ATTCTAGGCGAAGCCTCGAAGCTCGTCCCAATGGGTTTCACAACAGCGACAGAGATGCACCAAAGAAGGAGTGAG
CTCATATCCATCACTACGGGATCCAAGAATCTCGATACACTATTAGCCGGAGGCATCGAGACGGGATCCGTCACT
GAACTCTTTGGCGAGTTTCGAACAGGTAAAAGCCAGATATGTCATACTCTCGCCGTTACCTGTCAGCTACCCTTT
GACATGGGCGGCGGTGAGGGAAAATGTCTGTATATCGACACGGAGGGCACGTTTCGCCCCGTGAGACTCCTGGCG
GTCGCCAACCGGTTTGGTCTCTCCGGAGAAGAGGTGCTCGATAACGTGGCCTACGCTCGAGCGTACAACTCGGAT
CACCAGCTCCAGCTACTGAACCAAGCGGCGGCCATGATGTGCGAGACACGATTCTCCTTACTCGTCGTCGATAGC
GCCACGGCGCTCTACCGAACCGATTTCTGCGGTCGCGGCGAGCTATCCAACAGGCAGACGCATCTGGCCAAGTTC
ATGCGGACTCTACAGCGGCTCGCGGATGAGTTTGGAATCGCCGTCGTCATCACAAACCAGGTGGTTGCTCAGGTC
GACGGAGGGCCCAGTGCCATGTTCAACCCCGATCCGAAGAAGCCGATTGGCGGCAACATCATGGCTCACGCCAGC
ACGACGAGAATCAGCCTGAAGAAGGGGCGCGGCGAGACGCGCGTTGCCAAGATTTACGATAGCCCCTGCTTGCCC
GAGAGCGATACGCTTTTCGCCATCAACGAGGACGGCATCGGCGACCCGTCTCCCAAGGACATGGAAAAGGACTGA
Transcript >Ophcf2|07378
ATGAGTGGCGAAGGCTATGATGAGGCTCCGATGGAGGATGAAAGCGGCGCAGTCGGTCCTGGCGCGCCGACGCCA
CTCTCAGCTCTCGAGGGCGTCGCGGGCTTGACGAAGCGTGATATTGAGCTGGTCGTCGGGGGAGGCTTCAACACA
GTCGAGTCCGTTGCGTACACTCCGCGGAGGATGCTGGAACAGATCAAGGGCATCTCGGAGCAGAAGGCGACTAAA
ATTCTAGGCGAAGCCTCGAAGCTCGTCCCAATGGGTTTCACAACAGCGACAGAGATGCACCAAAGAAGGAGTGAG
CTCATATCCATCACTACGGGATCCAAGAATCTCGATACACTATTAGCCGGAGGCATCGAGACGGGATCCGTCACT
GAACTCTTTGGCGAGTTTCGAACAGGTAAAAGCCAGATATGTCATACTCTCGCCGTTACCTGTCAGCTACCCTTT
GACATGGGCGGCGGTGAGGGAAAATGTCTGTATATCGACACGGAGGGCACGTTTCGCCCCGTGAGACTCCTGGCG
GTCGCCAACCGGTTTGGTCTCTCCGGAGAAGAGGTGCTCGATAACGTGGCCTACGCTCGAGCGTACAACTCGGAT
CACCAGCTCCAGCTACTGAACCAAGCGGCGGCCATGATGTGCGAGACACGATTCTCCTTACTCGTCGTCGATAGC
GCCACGGCGCTCTACCGAACCGATTTCTGCGGTCGCGGCGAGCTATCCAACAGGCAGACGCATCTGGCCAAGTTC
ATGCGGACTCTACAGCGGCTCGCGGATGAGTTTGGAATCGCCGTCGTCATCACAAACCAGGTGGTTGCTCAGGTC
GACGGAGGGCCCAGTGCCATGTTCAACCCCGATCCGAAGAAGCCGATTGGCGGCAACATCATGGCTCACGCCAGC
ACGACGAGAATCAGCCTGAAGAAGGGGCGCGGCGAGACGCGCGTTGCCAAGATTTACGATAGCCCCTGCTTGCCC
GAGAGCGATACGCTTTTCGCCATCAACGAGGACGGCATCGGCGACCCGTCTCCCAAGGACATGGAAAAGGACTGA
Gene >Ophcf2|07378
ATGAGTGGCGAAGGCTATGATGAGGCTCCGATGGAGGATGAAAGCGGCGCAGTCGGTCCTGGCGCGCCGACGCCA
CTCTCAGCTCTCGAGGTGCGCACATTTCCGGGAAAGAGGCCTGCAAGACTCGCTGACGGTTTTTTTTATTTTGTA
GGGCGTCGCGGGCTTGACGAAGCGTGATATTGAGCTGGTCGTCGGGGGAGGCTTCAACACAGTCGAGTCCGTTGC
GTACACTCCGCGGAGGATGCTGGAACAGATCAAGGGCATCTCGGAGCAGAAGGCGACTAAAATTCTAGGCGAAGG
TGCGTACTCCATCGGACAGATAGACGGCGAGAAGCTGACTTGACTGCGGTGCAGCCTCGAAGCTCGTCCCAATGG
GTTTCACAACAGCGACAGAGATGCACCAAAGAAGGAGTGAGCTCATATCCATCACTACGGGATCCAAGAATCTCG
ATACACTATTAGCCGGAGGCATCGAGACGGGATCCGTCACTGAACTCTTTGGCGAGTTTCGAACAGGTAAAAGCC
AGATATGTCATACTCTCGCCGTTACCTGTCAGCTACCCTTTGACATGGGCGGCGGTGAGGGAAAATGTCTGTATA
TCGACACGGAGGGCACGTTTCGCCCCGTGAGACTCCTGGCGGTCGCCAACCGGTTTGGTCTCTCCGGAGAAGAGG
TGCTCGATAACGTGGCCTACGCTCGAGCGTACAACTCGGATCACCAGCTCCAGCTACTGAACCAAGCGGCGGCCA
TGATGTGCGAGACACGATTCTCCTTACTCGTCGTCGATAGCGCCACGGCGCTCTACCGAACCGATTTCTGCGGTC
GCGGCGAGCTATCCAACAGGCAGACGCATCTGGCCAAGTTCATGCGGACTCTACAGCGGCTCGCGGATGAGTTTG
GAATCGCCGTCGTCATCACAAACCAGGTGGTTGCTCAGGTCGACGGAGGGCCCAGTGCCATGTTCAACCCCGATC
CGAAGAAGCCGATTGGCGGCAACATCATGGCTCACGCCAGCACGACGAGAATCAGCCTGAAGAAGGGGCGCGGCG
AGACGCGCGTTGCCAAGATTTACGATAGCCCCTGCTTGCCCGAGAGCGATACGCTTTTCGCCATCAACGAGGACG
GCATCGGCGACCCGTCTCCCAAGGACATGGAAAAGGACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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