Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07357
Gene name
Locationscaffold_09:1300194..1301334
Strand-
Gene length (bp)1140
Transcript length (bp)1140
Coding sequence length (bp)1140
Protein length (aa) 380

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13424 TPR_12 Tetratricopeptide repeat 6.9E-08 26 83
PF13432 TPR_16 Tetratricopeptide repeat 1.2E-05 22 79
PF13181 TPR_8 Tetratricopeptide repeat 1.1E-03 53 83
PF13176 TPR_7 Tetratricopeptide repeat 1.1E-02 54 85

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07357
MAPRRPSKKKEPGPSSMLADAETQLGAGNIDEAIALATKALEVTGSGGDFELRALNLLGVLHVENGDEDEARGYL
ERAVSLDEEGLVDEKIGGGPEKFLFLAQLSEEGGIDSVRWFERGASALRKRIQALSAMASRTTKQQAELDEKQQQ
LGGVLCAVAEVYMTDLSWEDDAESRCEALVTEAMMIAPDSAETWQTVANVRVSQERTDEARAALKRSLDLWRDLP
PENPAIPEFPTRIALARLLLETKMEEEALTVLERLVTEDDESVEAWYLGGWCLYVTGEKQQQQQQRQEQNGGGSD
EWKETWSTARKWLAQCLKLHARLEYEDDRLGDHAVELFESINQELGAMPEGEEDDWEDEDGEDDVVDDDDDDDDE
EMRD*
Coding >Ophcf2|07357
ATGGCTCCCCGTCGACCCAGCAAGAAAAAGGAGCCGGGACCGAGCTCGATGCTCGCGGATGCTGAGACGCAGCTG
GGGGCGGGAAACATCGACGAAGCCATTGCACTGGCGACGAAAGCTCTCGAAGTCACGGGTTCAGGCGGCGACTTC
GAACTGCGGGCGCTGAATCTGCTGGGCGTGCTTCATGTCGAGAACGGCGACGAGGACGAGGCACGTGGATATTTG
GAGCGGGCGGTCAGCCTAGATGAGGAGGGCCTGGTGGACGAGAAAATAGGGGGAGGGCCGGAGAAGTTTCTCTTC
CTGGCGCAACTAAGTGAAGAGGGAGGAATCGATAGCGTGCGATGGTTTGAGCGTGGGGCGTCGGCGTTGAGGAAA
CGGATACAGGCCCTTTCCGCCATGGCCTCCAGAACAACCAAGCAACAGGCAGAACTCGATGAGAAGCAGCAACAG
CTCGGCGGCGTTTTATGCGCCGTGGCCGAGGTTTACATGACGGACTTGTCGTGGGAGGACGACGCAGAGAGCCGG
TGCGAGGCGCTCGTCACCGAGGCCATGATGATCGCTCCAGACTCGGCAGAGACATGGCAGACGGTGGCCAACGTT
CGCGTCTCGCAGGAGCGTACCGACGAAGCTAGAGCGGCTTTGAAGCGAAGTCTGGATCTGTGGCGGGACCTGCCG
CCCGAGAACCCTGCCATTCCCGAGTTTCCAACCAGGATCGCCCTCGCGCGCCTGCTCCTTGAGACTAAGATGGAG
GAGGAGGCGCTGACGGTACTGGAGAGACTGGTGACGGAGGATGATGAAAGTGTCGAGGCCTGGTACCTCGGCGGC
TGGTGTCTGTACGTGACGGGTGAGAAGCAGCAGCAGCAGCAGCAGCGCCAAGAGCAAAACGGCGGCGGCTCGGAC
GAGTGGAAGGAGACGTGGTCGACGGCTCGGAAGTGGCTGGCGCAGTGTCTGAAGCTACACGCGAGGCTGGAGTAC
GAGGACGACAGGCTCGGCGACCACGCGGTCGAACTATTTGAGTCTATTAACCAGGAGCTCGGGGCGATGCCGGAG
GGTGAGGAGGATGACTGGGAAGATGAGGACGGCGAGGACGATGTTGTCGATGATGATGATGATGATGATGATGAG
GAGATGCGGGACTGA
Transcript >Ophcf2|07357
ATGGCTCCCCGTCGACCCAGCAAGAAAAAGGAGCCGGGACCGAGCTCGATGCTCGCGGATGCTGAGACGCAGCTG
GGGGCGGGAAACATCGACGAAGCCATTGCACTGGCGACGAAAGCTCTCGAAGTCACGGGTTCAGGCGGCGACTTC
GAACTGCGGGCGCTGAATCTGCTGGGCGTGCTTCATGTCGAGAACGGCGACGAGGACGAGGCACGTGGATATTTG
GAGCGGGCGGTCAGCCTAGATGAGGAGGGCCTGGTGGACGAGAAAATAGGGGGAGGGCCGGAGAAGTTTCTCTTC
CTGGCGCAACTAAGTGAAGAGGGAGGAATCGATAGCGTGCGATGGTTTGAGCGTGGGGCGTCGGCGTTGAGGAAA
CGGATACAGGCCCTTTCCGCCATGGCCTCCAGAACAACCAAGCAACAGGCAGAACTCGATGAGAAGCAGCAACAG
CTCGGCGGCGTTTTATGCGCCGTGGCCGAGGTTTACATGACGGACTTGTCGTGGGAGGACGACGCAGAGAGCCGG
TGCGAGGCGCTCGTCACCGAGGCCATGATGATCGCTCCAGACTCGGCAGAGACATGGCAGACGGTGGCCAACGTT
CGCGTCTCGCAGGAGCGTACCGACGAAGCTAGAGCGGCTTTGAAGCGAAGTCTGGATCTGTGGCGGGACCTGCCG
CCCGAGAACCCTGCCATTCCCGAGTTTCCAACCAGGATCGCCCTCGCGCGCCTGCTCCTTGAGACTAAGATGGAG
GAGGAGGCGCTGACGGTACTGGAGAGACTGGTGACGGAGGATGATGAAAGTGTCGAGGCCTGGTACCTCGGCGGC
TGGTGTCTGTACGTGACGGGTGAGAAGCAGCAGCAGCAGCAGCAGCGCCAAGAGCAAAACGGCGGCGGCTCGGAC
GAGTGGAAGGAGACGTGGTCGACGGCTCGGAAGTGGCTGGCGCAGTGTCTGAAGCTACACGCGAGGCTGGAGTAC
GAGGACGACAGGCTCGGCGACCACGCGGTCGAACTATTTGAGTCTATTAACCAGGAGCTCGGGGCGATGCCGGAG
GGTGAGGAGGATGACTGGGAAGATGAGGACGGCGAGGACGATGTTGTCGATGATGATGATGATGATGATGATGAG
GAGATGCGGGACTGA
Gene >Ophcf2|07357
ATGGCTCCCCGTCGACCCAGCAAGAAAAAGGAGCCGGGACCGAGCTCGATGCTCGCGGATGCTGAGACGCAGCTG
GGGGCGGGAAACATCGACGAAGCCATTGCACTGGCGACGAAAGCTCTCGAAGTCACGGGTTCAGGCGGCGACTTC
GAACTGCGGGCGCTGAATCTGCTGGGCGTGCTTCATGTCGAGAACGGCGACGAGGACGAGGCACGTGGATATTTG
GAGCGGGCGGTCAGCCTAGATGAGGAGGGCCTGGTGGACGAGAAAATAGGGGGAGGGCCGGAGAAGTTTCTCTTC
CTGGCGCAACTAAGTGAAGAGGGAGGAATCGATAGCGTGCGATGGTTTGAGCGTGGGGCGTCGGCGTTGAGGAAA
CGGATACAGGCCCTTTCCGCCATGGCCTCCAGAACAACCAAGCAACAGGCAGAACTCGATGAGAAGCAGCAACAG
CTCGGCGGCGTTTTATGCGCCGTGGCCGAGGTTTACATGACGGACTTGTCGTGGGAGGACGACGCAGAGAGCCGG
TGCGAGGCGCTCGTCACCGAGGCCATGATGATCGCTCCAGACTCGGCAGAGACATGGCAGACGGTGGCCAACGTT
CGCGTCTCGCAGGAGCGTACCGACGAAGCTAGAGCGGCTTTGAAGCGAAGTCTGGATCTGTGGCGGGACCTGCCG
CCCGAGAACCCTGCCATTCCCGAGTTTCCAACCAGGATCGCCCTCGCGCGCCTGCTCCTTGAGACTAAGATGGAG
GAGGAGGCGCTGACGGTACTGGAGAGACTGGTGACGGAGGATGATGAAAGTGTCGAGGCCTGGTACCTCGGCGGC
TGGTGTCTGTACGTGACGGGTGAGAAGCAGCAGCAGCAGCAGCAGCGCCAAGAGCAAAACGGCGGCGGCTCGGAC
GAGTGGAAGGAGACGTGGTCGACGGCTCGGAAGTGGCTGGCGCAGTGTCTGAAGCTACACGCGAGGCTGGAGTAC
GAGGACGACAGGCTCGGCGACCACGCGGTCGAACTATTTGAGTCTATTAACCAGGAGCTCGGGGCGATGCCGGAG
GGTGAGGAGGATGACTGGGAAGATGAGGACGGCGAGGACGATGTTGTCGATGATGATGATGATGATGATGATGAG
GAGATGCGGGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail