Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07323
Gene name
Locationscaffold_09:1223985..1224851
Strand-
Gene length (bp)866
Transcript length (bp)594
Coding sequence length (bp)594
Protein length (aa) 198

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01253 SUI1 Translation initiation factor SUI1 5.3E-24 101 175

GO

GO Term Description Terminal node
GO:0003743 translation initiation factor activity Yes
GO:0006413 translational initiation Yes
GO:0090079 translation regulator activity, nucleic acid binding No
GO:0008152 metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0045182 translation regulator activity No
GO:0008135 translation factor activity, RNA binding No
GO:0008150 biological_process No
GO:0003676 nucleic acid binding No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0044237 cellular metabolic process No
GO:0097159 organic cyclic compound binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal 0.7936 0.5109 0.1012 0.1034 0.4066 0.049 0.3872 0.0817 0.1634 0.0008

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1925
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6116
Ophiocordyceps australis map64 (Brazil) OphauB2|2648
Ophiocordyceps camponoti-floridani Ophcf2|07323 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|4435
Ophiocordyceps kimflemingae Ophio5|8366
Ophiocordyceps subramaniannii Hirsu2|2055

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07323
MADAEQPEAAPAEPQARHIVYCGVCTLPPEYCEYGGKTKKCQEWLQANHADMYSRIWSAEALEAATASLSVEAQA
RAAKDAQKKAAKAEAAEQKQADKLAKSVVTIKRIERNKKKFVTAIVGLEAFGLDLKKVAKDFGKKFATGSSVTKV
PSGGEEIVVQGDVSDEVEEFILEKYKEIPEDNIELVDDKKKKKAAAK*
Coding >Ophcf2|07323
ATGGCCGACGCAGAGCAGCCAGAGGCGGCCCCAGCGGAGCCTCAGGCCAGACACATTGTCTACTGCGGCGTTTGC
ACGCTCCCCCCGGAGTACTGCGAGTATGGCGGCAAGACGAAGAAGTGTCAGGAATGGCTCCAGGCCAATCACGCC
GACATGTACAGCCGCATCTGGTCAGCAGAGGCGCTAGAGGCCGCCACCGCATCGCTCTCCGTCGAGGCCCAGGCG
AGGGCAGCCAAAGACGCGCAGAAAAAGGCAGCCAAGGCTGAAGCTGCCGAGCAGAAGCAGGCTGACAAGCTCGCC
AAAAGCGTCGTCACCATCAAGCGCATCGAGCGCAACAAGAAGAAGTTTGTCACTGCCATCGTCGGGCTCGAGGCT
TTTGGTCTCGACTTGAAAAAGGTAGCAAAGGACTTTGGCAAGAAGTTTGCGACCGGCTCGTCCGTGACAAAGGTC
CCCAGCGGGGGCGAGGAGATTGTTGTGCAAGGAGATGTCAGCGACGAAGTGGAGGAGTTCATCCTGGAAAAGTAT
AAGGAGATACCCGAGGATAACATTGAGCTTGTCGACGACAAGAAGAAGAAGAAGGCGGCTGCGAAATAG
Transcript >Ophcf2|07323
ATGGCCGACGCAGAGCAGCCAGAGGCGGCCCCAGCGGAGCCTCAGGCCAGACACATTGTCTACTGCGGCGTTTGC
ACGCTCCCCCCGGAGTACTGCGAGTATGGCGGCAAGACGAAGAAGTGTCAGGAATGGCTCCAGGCCAATCACGCC
GACATGTACAGCCGCATCTGGTCAGCAGAGGCGCTAGAGGCCGCCACCGCATCGCTCTCCGTCGAGGCCCAGGCG
AGGGCAGCCAAAGACGCGCAGAAAAAGGCAGCCAAGGCTGAAGCTGCCGAGCAGAAGCAGGCTGACAAGCTCGCC
AAAAGCGTCGTCACCATCAAGCGCATCGAGCGCAACAAGAAGAAGTTTGTCACTGCCATCGTCGGGCTCGAGGCT
TTTGGTCTCGACTTGAAAAAGGTAGCAAAGGACTTTGGCAAGAAGTTTGCGACCGGCTCGTCCGTGACAAAGGTC
CCCAGCGGGGGCGAGGAGATTGTTGTGCAAGGAGATGTCAGCGACGAAGTGGAGGAGTTCATCCTGGAAAAGTAT
AAGGAGATACCCGAGGATAACATTGAGCTTGTCGACGACAAGAAGAAGAAGAAGGCGGCTGCGAAATAG
Gene >Ophcf2|07323
ATGGCCGACGCAGAGCAGCCAGAGGCGGCCCCAGCGGAGCCTCAGGCCAGACACATTGTCTACTGCGGCGGTATG
ACGGTTCCTTCCCCCGAGAATTCCCCTGAGCCTTCCTCTGAGGCCCGACACCCGCTGACCTCGAGTCCTCCCAAC
GCAGTTTGCACGCTCCCCCCGGAGGTGCGCCGTTTGCCTGACCCCGTGTGACCGGATCCGCTGACGCCCTCGCCA
GTACTGCGAGTATGGCGGCAAGACGAAGAAGTGTCAGGAATGGCTCCAGGCCAATCACGCCGACATGTACAGCCG
CATCTGGTCAGCAGGTCCGTTCTGCTTTCCCCCCGGGCGAAACGTCGACGCCGCCGCGACTAACGGGCCCTCACA
GAGGCGCTAGAGGCCGCCACCGCATCGCTCTCCGTCGAGGCCCAGGCGAGGGCAGCCAAAGACGCGCAGAAAAAG
GCAGCCAAGGCTGAAGCTGCCGAGCAGAAGCAGGCTGACAAGCTCGCCAAAAGCGTCGTCACCATCAAGCGCATC
GAGCGCAACAAGAAGAAGTTTGTCACTGCCATCGTCGGGCTCGAGGCTTTTGGTCTCGACTTGAAAAAGGTGAGC
CCGCCCTCTCCGACTTTCTGACACGAGAGTCAACCAGAGTCAACCAGCGCTCACACCGGAGACAACAGGTAGCAA
AGGACTTTGGCAAGAAGTTTGCGACCGGCTCGTCCGTGACAAAGGTCCCCAGCGGGGGCGAGGAGATTGTTGTGC
AAGGAGATGTCAGCGACGAAGTGGAGGAGTTCATCCTGGAAAAGTATAAGGAGATACCCGAGGATAACATTGAGC
TTGTCGACGACAAGAAGAAGAAGAAGGCGGCTGCGAAATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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