Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|07310
Gene name
Location	scaffold_09:1196087..1196990
Strand	+
Gene length (bp)	903
Transcript length (bp)	714
Coding sequence length (bp)	714
Protein length (aa)	238

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00226	DnaJ	DnaJ domain	1.4E-19	8	74

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 51	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|07310 MATETPPDYYAILSIPETATDQQIRDAYKRAALKTHPDRVATDSPERPARTRKFQLVNDAYYTLSDSKRRRDYDN QRRLFGNATAGDPFAEAEQDEPEAGAGSSGPYSWAWNFFTRQARGRGDADNNADQQRAQQNEQFGDVFEEMMRDE GLAEDGTSRPTNKFWSLLGGVSGGALGFIVANVPGMVAGAVAGNRLGAVRDAKGKSVYSVFQELPQDARARLLTQ LATRVFSHAVGI*
Coding	>Ophcf2\|07310 ATGGCGACAGAGACGCCCCCAGATTACTATGCCATCCTATCCATCCCGGAGACGGCGACAGACCAGCAGATCCGC GATGCCTACAAGCGTGCCGCTCTCAAGACCCATCCAGACCGGGTAGCGACCGACTCGCCCGAGCGTCCAGCCCGC ACCCGAAAATTCCAGCTCGTCAACGACGCCTACTACACGCTATCCGACAGCAAGCGCCGACGAGACTACGACAAC CAGCGCAGGCTCTTTGGGAACGCGACAGCGGGAGACCCCTTCGCAGAGGCCGAGCAAGATGAGCCCGAGGCTGGC GCTGGCTCCTCCGGTCCGTACTCGTGGGCTTGGAACTTCTTTACCCGTCAGGCTCGCGGCCGTGGCGACGCCGAT AACAATGCCGATCAGCAGCGGGCTCAGCAGAATGAGCAGTTCGGCGACGTCTTCGAGGAGATGATGCGCGACGAG GGTCTGGCCGAGGACGGCACCAGTCGGCCCACCAACAAGTTCTGGAGCCTGCTGGGTGGCGTCAGCGGCGGCGCT CTTGGCTTCATCGTTGCCAACGTTCCCGGTATGGTCGCAGGCGCCGTGGCTGGAAACCGGTTGGGGGCCGTCCGG GACGCCAAGGGCAAGAGCGTCTACTCCGTCTTCCAGGAGCTTCCACAAGATGCAAGGGCCAGACTGCTCACTCAA CTGGCCACCAGAGTCTTTAGCCACGCTGTTGGCATCTGA
Transcript	>Ophcf2\|07310 ATGGCGACAGAGACGCCCCCAGATTACTATGCCATCCTATCCATCCCGGAGACGGCGACAGACCAGCAGATCCGC GATGCCTACAAGCGTGCCGCTCTCAAGACCCATCCAGACCGGGTAGCGACCGACTCGCCCGAGCGTCCAGCCCGC ACCCGAAAATTCCAGCTCGTCAACGACGCCTACTACACGCTATCCGACAGCAAGCGCCGACGAGACTACGACAAC CAGCGCAGGCTCTTTGGGAACGCGACAGCGGGAGACCCCTTCGCAGAGGCCGAGCAAGATGAGCCCGAGGCTGGC GCTGGCTCCTCCGGTCCGTACTCGTGGGCTTGGAACTTCTTTACCCGTCAGGCTCGCGGCCGTGGCGACGCCGAT AACAATGCCGATCAGCAGCGGGCTCAGCAGAATGAGCAGTTCGGCGACGTCTTCGAGGAGATGATGCGCGACGAG GGTCTGGCCGAGGACGGCACCAGTCGGCCCACCAACAAGTTCTGGAGCCTGCTGGGTGGCGTCAGCGGCGGCGCT CTTGGCTTCATCGTTGCCAACGTTCCCGGTATGGTCGCAGGCGCCGTGGCTGGAAACCGGTTGGGGGCCGTCCGG GACGCCAAGGGCAAGAGCGTCTACTCCGTCTTCCAGGAGCTTCCACAAGATGCAAGGGCCAGACTGCTCACTCAA CTGGCCACCAGAGTCTTTAGCCACGCTGTTGGCATCTGA
Gene	>Ophcf2\|07310 ATGGCGACAGAGACGCCCCCAGATTACTGTTAGCCATACCTTGCTCTTCTCTCGACGCCTGCTGATGATCGCAGA TGCCATCCTATCCATCCCGGAGACGGCGACAGACCAGCAGATCCGCGATGCCTACAAGCGGTGCGCGAAACTCCC CGTTCATTCGTACCTCAAAGCTGACATGTTTCCCTCCCAGTGCCGCTCTCAAGACCCATCCAGACCGGGTAGCGA CCGACTCGCCCGAGCGTCCAGCCCGCACCCGAAAATTCCAGCTCGTCAACGACGCCTACTACACGCTATCCGACA GCAAGCGCCGACGAGACTACGACAACCAGCGCAGGCTCTTTGGGAACGCGACAGCGGGAGACCCCTTCGCAGAGG CCGAGCAAGATGAGCCCGAGGCTGGCGCTGGCTCCTCCGGTCCGTACTCGTGGGCTTGGAACTTCTTTACCCGTC AGGCTCGCGGCCGTGGCGACGCCGATAACAATGCCGATCAGCAGCGGGCTCAGCAGAATGAGCAGTTCGGCGACG TCTTCGAGGAGATGATGCGCGACGAGGGTCTGGCCGAGGACGGCACCAGTCGGCCCACCAACAAGTTCTGGAGCC TGCTGGGTGGCGTCAGCGGCGGCGCTCTTGGCTTCATCGTTGCCAACGTTCCCGGTATGGTCGCAGGCGCCGTGG CTGGAAACCGGTTGGGGGCCGTCCGGGACGCCAAGGGCAAGAGCGTCTACTCCGTCTTCCAGGTAGGTATTCTAT GACTAGACAGTTCCCGGAGACGGTCTTGCAAGCCGGCATCCCGTGTATCGCATTCATGGCTGACGATGGACACAG GAGCTTCCACAAGATGCAAGGGCCAGACTGCTCACTCAACTGGCCACCAGAGTCTTTAGCCACGCTGTTGGCATC TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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