Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07307
Gene name
Locationscaffold_09:1186965..1190445
Strand-
Gene length (bp)3480
Transcript length (bp)2004
Coding sequence length (bp)2004
Protein length (aa) 668

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01544 CorA CorA-like Mg2+ transporter protein 5.0E-09 557 620

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0030001 metal ion transport Yes
GO:0051234 establishment of localization No
GO:0051179 localization No
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0006810 transport No
GO:0022857 transmembrane transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0006812 cation transport No
GO:0008324 cation transmembrane transporter activity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0015075 ion transmembrane transporter activity No
GO:0006811 ion transport No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 61 0.45

Transmembrane Domains

Domain # Start End Length
1 564 586 22
2 599 621 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 2.53 0.69 4.36
Alive In ants, during behavior modification 6.44 2.45 10.43
Dead In ants, recently dead 5.72 2.06 9.37

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.001043 yes
Alive Dead 0.668075 no
Dead Fungus 0.006027 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07307
MTSLDDDDPASKTLNLIRGGPWPCFAARRAEDLGCIKTSLGSAFVLVVIRIPTRPTRVMAGLFVGEGEAPAEDDM
ASDSEVKPCKSSSDEADSYGSRRERQSSEDVDVLEGFDFVFPGAKPSYQLSDLLDMAGQESDGSPKDDEPSLRPT
DATWVLSSRYCGDAELGGSHGAELTLLHDGQGRTRPLFSWLHVQQQVMNFDDFWTEISHRVRFSEEEKKATAKLC
ADVKKHAIKSRHNERGEAVGLMEPRYFQVPLRQAEGQQAVRWISLPFFSLQPCSGLLSASSPASFPAQTLLQTHY
SRTPAQRDLKQAVSLLVTCGSITQSDLCSSGSLKLISQPPQREPGSSGSGRILVAYGNAVLWVLRVRDCPTWFSF
ISRFNAFWPRNVDFRWRDRVVLGSLNTDITTKPSDRSYQHRIDLIRQELTIISQTLTSQSLLISDIRSSLPYEAS
SSEDVTRHRPDMIITRTLHRSGTRTRPGVSTRAVRAMPATDLMPVAELRPDELAAASRLAPTDQLGFRDLLLAEC
GRGVEARELELVRLGDYAEELENDVVFRMGSTKDRQEKAIYAFTLVTIIFLPISAISSIFGMNTSDIRNMASDQW
LYWAVAMPVTIVVILAGLWWINEFGGGGTPSGGGGGGPSLAESRERLYRSPESRVRRRRRRTRTRTF*
Coding >Ophcf2|07307
ATGACGAGCCTCGACGACGACGATCCGGCTTCCAAGACTCTGAACCTCATCCGCGGAGGCCCGTGGCCGTGTTTC
GCAGCCAGACGGGCCGAAGACCTCGGCTGTATCAAGACCAGCCTCGGATCCGCGTTCGTGCTGGTCGTGATCCGG
ATTCCGACTCGTCCAACGAGGGTCATGGCTGGGCTGTTCGTGGGCGAGGGCGAGGCTCCGGCTGAGGACGACATG
GCTTCTGACAGCGAGGTGAAGCCGTGCAAGAGCTCTTCGGATGAAGCTGACTCGTACGGATCCCGTCGAGAGAGG
CAGTCGAGTGAGGACGTCGACGTGCTGGAAGGCTTCGACTTTGTCTTCCCCGGGGCCAAACCGTCGTATCAGCTC
TCGGATCTGCTCGACATGGCAGGACAGGAGTCAGACGGGTCTCCCAAGGATGACGAGCCGAGCCTCAGACCGACA
GACGCTACTTGGGTGTTGTCGTCGCGGTACTGCGGCGATGCCGAGCTGGGGGGCTCGCATGGAGCTGAGCTGACG
CTTCTTCACGATGGACAGGGCCGGACGAGGCCGTTGTTTAGCTGGCTACATGTTCAACAGCAGGTCATGAACTTT
GACGATTTTTGGACGGAAATCTCACACCGCGTCCGCTTCTCCGAAGAAGAAAAGAAAGCAACAGCCAAACTGTGC
GCCGACGTCAAAAAACACGCCATCAAATCCCGTCACAACGAACGCGGCGAGGCAGTCGGCCTGATGGAGCCACGA
TACTTCCAAGTCCCGCTGAGGCAAGCAGAAGGCCAACAAGCCGTCCGCTGGATCAGCCTACCCTTCTTCTCGCTG
CAGCCGTGCTCGGGATTGCTCTCGGCGTCGAGTCCGGCGTCGTTCCCGGCGCAGACTCTGCTTCAGACGCATTAT
TCGCGGACGCCGGCGCAGAGGGATTTGAAGCAGGCTGTCTCTCTGCTCGTGACGTGTGGTTCCATCACGCAGTCG
GATTTGTGCTCGTCTGGCTCGCTGAAGCTCATCTCGCAGCCGCCGCAGAGGGAACCGGGGAGTTCCGGCTCCGGA
CGGATCCTCGTGGCTTATGGGAATGCCGTCCTCTGGGTCTTGCGCGTACGAGACTGTCCGACCTGGTTTTCATTC
ATCTCCCGCTTCAACGCCTTCTGGCCCAGGAACGTCGACTTTCGATGGAGGGATCGCGTCGTTCTCGGCTCGCTG
AACACCGACATCACAACCAAACCATCAGACCGATCTTACCAACACCGCATAGACCTCATCCGCCAAGAACTAACA
ATCATCTCCCAAACCCTCACAAGCCAAAGCCTCCTCATCTCCGACATCCGCTCCAGCCTGCCCTACGAAGCCTCC
TCATCCGAAGACGTCACCCGTCACCGTCCGGACATGATCATCACCCGCACCCTCCACCGCTCCGGGACACGGACT
CGGCCCGGCGTCTCCACCCGCGCCGTCCGCGCCATGCCGGCCACGGATCTCATGCCCGTGGCTGAGCTGCGGCCG
GATGAGCTGGCGGCTGCGTCGAGGCTTGCGCCTACCGATCAGCTCGGCTTTCGGGACCTGCTGCTTGCTGAGTGT
GGGCGTGGTGTTGAGGCGAGGGAGCTGGAGTTGGTGCGGTTGGGGGATTATGCTGAGGAGTTGGAGAACGATGTT
GTCTTCAGGATGGGCTCGACAAAGGATCGCCAGGAGAAGGCAATCTATGCCTTTACCCTCGTCACCATCATCTTT
CTGCCCATTAGCGCCATCTCCAGCATCTTTGGCATGAACACGAGTGATATCCGCAACATGGCTTCTGACCAGTGG
CTGTACTGGGCTGTCGCTATGCCCGTCACCATCGTCGTTATTCTTGCTGGGCTCTGGTGGATTAACGAGTTTGGC
GGTGGGGGGACGCCGAGTGGTGGTGGTGGTGGCGGTCCGTCTCTTGCTGAGAGCAGGGAGCGTCTTTATCGAAGC
CCGGAGTCGAGGGTGCGGCGGCGGAGGAGGAGAACGAGGACGAGAACGTTTTGA
Transcript >Ophcf2|07307
ATGACGAGCCTCGACGACGACGATCCGGCTTCCAAGACTCTGAACCTCATCCGCGGAGGCCCGTGGCCGTGTTTC
GCAGCCAGACGGGCCGAAGACCTCGGCTGTATCAAGACCAGCCTCGGATCCGCGTTCGTGCTGGTCGTGATCCGG
ATTCCGACTCGTCCAACGAGGGTCATGGCTGGGCTGTTCGTGGGCGAGGGCGAGGCTCCGGCTGAGGACGACATG
GCTTCTGACAGCGAGGTGAAGCCGTGCAAGAGCTCTTCGGATGAAGCTGACTCGTACGGATCCCGTCGAGAGAGG
CAGTCGAGTGAGGACGTCGACGTGCTGGAAGGCTTCGACTTTGTCTTCCCCGGGGCCAAACCGTCGTATCAGCTC
TCGGATCTGCTCGACATGGCAGGACAGGAGTCAGACGGGTCTCCCAAGGATGACGAGCCGAGCCTCAGACCGACA
GACGCTACTTGGGTGTTGTCGTCGCGGTACTGCGGCGATGCCGAGCTGGGGGGCTCGCATGGAGCTGAGCTGACG
CTTCTTCACGATGGACAGGGCCGGACGAGGCCGTTGTTTAGCTGGCTACATGTTCAACAGCAGGTCATGAACTTT
GACGATTTTTGGACGGAAATCTCACACCGCGTCCGCTTCTCCGAAGAAGAAAAGAAAGCAACAGCCAAACTGTGC
GCCGACGTCAAAAAACACGCCATCAAATCCCGTCACAACGAACGCGGCGAGGCAGTCGGCCTGATGGAGCCACGA
TACTTCCAAGTCCCGCTGAGGCAAGCAGAAGGCCAACAAGCCGTCCGCTGGATCAGCCTACCCTTCTTCTCGCTG
CAGCCGTGCTCGGGATTGCTCTCGGCGTCGAGTCCGGCGTCGTTCCCGGCGCAGACTCTGCTTCAGACGCATTAT
TCGCGGACGCCGGCGCAGAGGGATTTGAAGCAGGCTGTCTCTCTGCTCGTGACGTGTGGTTCCATCACGCAGTCG
GATTTGTGCTCGTCTGGCTCGCTGAAGCTCATCTCGCAGCCGCCGCAGAGGGAACCGGGGAGTTCCGGCTCCGGA
CGGATCCTCGTGGCTTATGGGAATGCCGTCCTCTGGGTCTTGCGCGTACGAGACTGTCCGACCTGGTTTTCATTC
ATCTCCCGCTTCAACGCCTTCTGGCCCAGGAACGTCGACTTTCGATGGAGGGATCGCGTCGTTCTCGGCTCGCTG
AACACCGACATCACAACCAAACCATCAGACCGATCTTACCAACACCGCATAGACCTCATCCGCCAAGAACTAACA
ATCATCTCCCAAACCCTCACAAGCCAAAGCCTCCTCATCTCCGACATCCGCTCCAGCCTGCCCTACGAAGCCTCC
TCATCCGAAGACGTCACCCGTCACCGTCCGGACATGATCATCACCCGCACCCTCCACCGCTCCGGGACACGGACT
CGGCCCGGCGTCTCCACCCGCGCCGTCCGCGCCATGCCGGCCACGGATCTCATGCCCGTGGCTGAGCTGCGGCCG
GATGAGCTGGCGGCTGCGTCGAGGCTTGCGCCTACCGATCAGCTCGGCTTTCGGGACCTGCTGCTTGCTGAGTGT
GGGCGTGGTGTTGAGGCGAGGGAGCTGGAGTTGGTGCGGTTGGGGGATTATGCTGAGGAGTTGGAGAACGATGTT
GTCTTCAGGATGGGCTCGACAAAGGATCGCCAGGAGAAGGCAATCTATGCCTTTACCCTCGTCACCATCATCTTT
CTGCCCATTAGCGCCATCTCCAGCATCTTTGGCATGAACACGAGTGATATCCGCAACATGGCTTCTGACCAGTGG
CTGTACTGGGCTGTCGCTATGCCCGTCACCATCGTCGTTATTCTTGCTGGGCTCTGGTGGATTAACGAGTTTGGC
GGTGGGGGGACGCCGAGTGGTGGTGGTGGTGGCGGTCCGTCTCTTGCTGAGAGCAGGGAGCGTCTTTATCGAAGC
CCGGAGTCGAGGGTGCGGCGGCGGAGGAGGAGAACGAGGACGAGAACGTTTTGA
Gene >Ophcf2|07307
ATGACGAGCCTCGACGACGACGATCCGGCTTCCAAGACTCTGAACCTCATCCGCGGAGGCCCGTGGCCGTGTTTC
GCAGCCAGACGGGCCGAAGACCTCGGCTGTATCAAGACCAGCCTCGGATCCGCGTTCGTGCTGGTCGTGATCCGG
ATGTGAGCTTCGACGGGCCGGAAGATGACGAAGCCGGAGAGAGAGACGAAATGTCGCCGTCTTGGAGTCCGACTC
GTCCAACGAGGGTCATGGCTGGGCTGTTCGTGGGCGAGGGCGAGGCTCCGGCTGAGGACGACATGGCTTCTGACA
GCGAGGTGAAGCCGTGCAAGAGCTCTTCGGATGAAGCTGACTCGTACGGATCCCGTCGAGAGAGGCAGTCGAGTG
AGGACGTCGACGTGCTGGAAGGCTTCGACTTTGTCTTCCCCGGGGCCAAACCGTCGTATCAGCTCTCGGATCTGC
TCGACATGGCAGGACAGGAGTCAGACGGGTCTCCCAAGGATGACGAGCCGAGCCTCAGACCGACAGACGCTACTT
GGGTGTTGTCGTCGCGGTACTGCGGCGATGCCGAGCTGGGGGGCTCGCATGGAGCTGAGCTGACGCTTCTTCACG
ATGGACAGGGCCGGACGAGGCCGTTGTTTAGCTGGCTGTGAGGAGACTGGACGATGAGTAGTCTTGTCTGTTGAA
GTGAGTGAGACTGATTGATGAATATACAGACATGTTCAACAGCAGGTCATGAACTTTGACGATTTTTGGGTATCA
AGATGCCCCTTTTCTCCTAACAAGCCAAAGGACTGACTGAAGATATCAGACGGAAATCTCACACCGCGTCCGCTT
CTCCGAAGAAGAAAAGAAAGCAACAGCCAAACTGTGCGCCGACGTCAAAAAACACGCCATCAAATCCCGTCACAA
CGAACGCGGCGAGGCAGTCGGCCTGATGGAGCCACGATACTTCCAAGTCCCGCTGAGGCAAGCAGAAGGCCAACA
AGCCGTCCGCTGGATCAGCCTACCCTTCTTCTCGCTGCAGCCGTGCTCGGGATTGCTCTCGGCGTCGAGTCCGGC
GTCGTTCCCGGCGCAGACTCTGCTTCAGACGCATTATTCGCGGACGCCGGCGCAGAGGGATTTGAAGCAGGCTGT
CTGTCAGTTGGGGGTTGCGGATAAGGGGTGTTGTTTTCATGTTGCGCAGTTGTGGTGTTTGGTTGTTGATAACTG
TGAGTTTTTGTTTTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCTT
GTTCTTGTTCTTGTACTTCTTCTTCTTCTTCTTCTTCTTTTCGCTGCTGAGGTCGTCGTGGTAGCTCTGCTCGTG
ACGTGTGGTTCCATCACGCAGTCGGATTTGTGCTCGTCTGGCTCGCTGAAGCTCATCTCGCAGCCGCCGCAGAGG
GAACCGGGGAGTTCCGGCTCCGGACGGATCCTCGTGGCTTATGGGAATGCCGTCCTCTGGGTCTTGCGCGTACGA
GACTGTCCGACCTGGTTTGTAAGTCGAGGCCATCTAGAGCTTTTTTAACAAGGCTGCTACAAGGCTGCTGACGGA
CACGCTGTCAGTCATTCATCTCCCGCTTCAACGCCTTCTGGCCCAGGAACGTCGACTTTCGATGGAGGGATCGCG
TCGTAGATGCCAGCAGTTGGCCCAAGATGCTCCAGCTCGCATCCCTCCCGCGAGCAAGCATCCTGCTAAAGCTGC
ACATCATCAAGACTCCTCCTCCCCCTTCACACACGGAAGCTTCCTCCACCGAACAAGCCCGGGAGAAACCCGAGC
ATCTGCACGTGCTCACTCTTCGGCCGGGGGCTTCGACGGCGGCGGCATCTGAGAGTCCGGACGAGGCGCTGAGGA
CGCAGCTGGCGAAAGCGGAGGATTTTCTTCTTCGTAATTCTTCGTTTGCGCAGAGGCTGGCTTATAGGAGGTGTG
CTGGGGCGTCGAGGAGGGAGGTGTTTGATGGGCTTTTGGACGAGGGATCTGCGGTTGAGGTTGGGGCTGATGATT
CGATGAGGGCTTCTCACGAGGTTAGGCTTGATCTCTTTCACTCTTGTGAGACCATCTTTCAGCTATTTCTGCCTC
GAGACTTTGATGGTCCGACGACGGACAAGTTCTGGGGTTCTGTCAAGGCCATCGTGAGTATCAACCCCCTCCCCG
TTTCCCCTCAACTTGACTGATACAAAGCCATGCATGAATTACAAAGATGATGCCATCTCCGGAACAAAACCGCCT
CGTCCACTCTCTAAGAGACTCCCTCCGAACAACCCACCATCAAATCCGAGCCTTCCAACGCATAATGTCCCACGC
CCATCAACCGACTCTCCTCCCCCCCCGACAACTCGTCACCGGCTGGCTGCACCTCGTCTCCGCCCTTGTAGCCGC
CGGATCTTCGCGGGCGGGCTGGCGCGGACATGTGGATAGGGCGAGGGCGTTGGTTGAGGAGGGTATGAGGCTTGT
TGTGCGGGCTTCGTCTGGTAGGAGTCTTGTTGATGATTCGGCTGTGCTGCCCATGGAGATTGTTTCTCTTGTTGC
GGCGGGATTGTTGAGGGATTGGGTTGGGGGGAATGATGACGTGGTTGATACGTATTCGCAGGTTCTCGGCTCGCT
GGTTTGTTTCCTTGATGGCATCTGAGAAGCTGTTACTGACTTGTTTCTCAGAACACCGACATCACAACCAAACCA
TCAGACCGATCTTACCAACACCGCATAGACCTCATCCGCCAAGAACTAACAATCATCTCCCAAACCCTCACAAGC
CAAAGCCTCCTCATCTCCGACATCCGCTCCAGCCTGCCCTACGAAGCCTCCTCATCCGAAGACGTCACCCGTCAC
CGTCCGGACATGATCATCACCCGCACCCTCCACCGCTCCGGGACACGGACTCGGCCCGGCGTCTCCACCCGCGCC
GTCCGCGCCATGCCGGCCACGGATCTCATGCCCGTGGCTGAGCTGCGGCCGGATGAGCTGGCGGCTGCGTCGAGG
CTTGCGCCTACCGATCAGCTCGGCTTTCGGGACCTGCTGCTTGCTGAGTGTGGGCGTGGTGTTGAGGCGAGGGAG
CTGGAGTTGGTGCGGTTGGGGGATTATGCTGAGGAGTTGGAGAACGATGTTGTCTTCAGGATGGGCTCGACAAAG
GATCGCCAGGAGAAGGCAATCTATGCCTTTACCCTCGTCACCATCATCTTTCTGCCCATTAGCGCCATCTCCAGC
ATCTTTGGCATGAACACGAGTGATATCCGCAACATGGCTTCTGACCAGTGGCTGTACTGGGCTGTCGCTATGCCC
GTCACCATCGTCGTTATTCTTGCTGGGCTCTGGTGGATTAACGAGTTTGGCGGTGGGGGGACGCCGAGTGGTGGT
GGTGGTGGCGGTCCGTCTCTTGCTGAGAGCAGGGAGCGTCTTTATCGAAGCCCGGAGTCGAGGGTGCGGCGGCGG
AGGAGGAGAACGAGGACGAGAACGTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail