Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07276
Gene name
Locationscaffold_09:1094832..1095153
Strand-
Gene length (bp)321
Transcript length (bp)321
Coding sequence length (bp)321
Protein length (aa) 107

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08636 Pkr1 ER protein Pkr1 6.1E-29 4 72

GO

GO Term Description Terminal node
GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly Yes
GO:0043933 protein-containing complex organization No
GO:0071840 cellular component organization or biogenesis No
GO:0070071 proton-transporting two-sector ATPase complex assembly No
GO:0065003 protein-containing complex assembly No
GO:0008150 biological_process No
GO:0070070 proton-transporting V-type ATPase complex assembly No
GO:0009987 cellular process No
GO:0022607 cellular component assembly No
GO:0016043 cellular component organization No

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 48 67 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07276
MASSLATDLWDAIFTPGTTPALLRATNMSFACLQLVLGALLAATTSPHFVVLSGLCAVLWYSVNWFVAEMEAETR
KMSSSPSRGDESSDTEVEESVAGSRWAGVEA*
Coding >Ophcf2|07276
ATGGCGTCTTCGTTGGCAACGGATCTCTGGGACGCCATCTTCACGCCCGGAACGACACCTGCGCTCCTGCGCGCG
ACAAACATGTCCTTCGCCTGCCTGCAGCTCGTCCTAGGCGCGCTGCTAGCCGCGACGACGAGTCCGCACTTTGTC
GTGCTCTCGGGATTGTGCGCCGTGCTGTGGTATTCTGTCAACTGGTTCGTTGCCGAGATGGAGGCCGAGACGCGG
AAGATGTCGTCGTCTCCTTCCAGGGGGGACGAGAGTAGCGATACTGAGGTTGAGGAGTCGGTGGCGGGAAGTCGG
TGGGCGGGGGTTGAGGCTTAG
Transcript >Ophcf2|07276
ATGGCGTCTTCGTTGGCAACGGATCTCTGGGACGCCATCTTCACGCCCGGAACGACACCTGCGCTCCTGCGCGCG
ACAAACATGTCCTTCGCCTGCCTGCAGCTCGTCCTAGGCGCGCTGCTAGCCGCGACGACGAGTCCGCACTTTGTC
GTGCTCTCGGGATTGTGCGCCGTGCTGTGGTATTCTGTCAACTGGTTCGTTGCCGAGATGGAGGCCGAGACGCGG
AAGATGTCGTCGTCTCCTTCCAGGGGGGACGAGAGTAGCGATACTGAGGTTGAGGAGTCGGTGGCGGGAAGTCGG
TGGGCGGGGGTTGAGGCTTAG
Gene >Ophcf2|07276
ATGGCGTCTTCGTTGGCAACGGATCTCTGGGACGCCATCTTCACGCCCGGAACGACACCTGCGCTCCTGCGCGCG
ACAAACATGTCCTTCGCCTGCCTGCAGCTCGTCCTAGGCGCGCTGCTAGCCGCGACGACGAGTCCGCACTTTGTC
GTGCTCTCGGGATTGTGCGCCGTGCTGTGGTATTCTGTCAACTGGTTCGTTGCCGAGATGGAGGCCGAGACGCGG
AAGATGTCGTCGTCTCCTTCCAGGGGGGACGAGAGTAGCGATACTGAGGTTGAGGAGTCGGTGGCGGGAAGTCGG
TGGGCGGGGGTTGAGGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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