© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|07262 |
| Gene name | |
| Location | scaffold_09:1053318..1054354 |
| Strand | + |
| Gene length (bp) | 1036 |
| Transcript length (bp) | 936 |
| Coding sequence length (bp) | 936 |
| Protein length (aa) | 312 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07743 | HSCB_C | HSCB C-terminal oligomerisation domain | 7.6E-13 | 231 | 294 |
| PF00226 | DnaJ | DnaJ domain | 8.9E-08 | 158 | 205 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0051259 | protein complex oligomerization | Yes |
| GO:0043933 | protein-containing complex organization | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0065003 | protein-containing complex assembly | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0022607 | cellular component assembly | No |
| GO:0016043 | cellular component organization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|07262 MVLRFARFEWQPTILSFSSPPPTLPPLHDESTPIHDIVNLHHQTSTTLDRLSNDVIVFPRRLPRESQRIDPPTPP PTPPSSPPDRLRPIIVINAIIIVDAFISPIISLIIDPIITPLISLTPIPIPIPTPKYNLRTLPQIPPLRPPPSGP FQVNLPSLRREFLQLQSIHHPDKHPADEKVSAEATSALINHAYHILSDPLLRAQYLLKLRKIDVNGDRQKTIDDE PLWEVVMEAFEAVDAATTQADLDALRKLNETRISTCEHELDIAFAKDDMKAATHITIRLLFWDKIRAWIEEWKPP AETSTFSPIQP* |
| Coding | >Ophcf2|07262 ATGGTGTTAAGATTTGCTCGTTTTGAGTGGCAGCCCACTATACTGAGCTTTTCCTCACCTCCCCCGACCCTCCCT CCACTCCACGACGAGTCCACACCAATCCATGACATCGTCAACCTTCATCATCAAACATCCACGACTCTCGATCGC CTCTCCAATGATGTCATCGTCTTTCCTCGCCGCCTCCCGCGCGAGTCGCAGCGCATCGATCCTCCTACGCCCCCT CCTACACCCCCGTCGTCTCCCCCTGATCGCCTCCGCCCCATCATCGTCATCAACGCCATCATCATCGTCGACGCC TTCATCAGCCCCATCATCAGCCTCATCATCGACCCCATCATCACCCCCCTCATCAGCCTCACCCCCATCCCCATC CCCATCCCAACCCCAAAGTACAATCTACGAACGCTTCCCCAAATCCCTCCCCTCCGGCCCCCCCCCTCCGGCCCC TTCCAAGTCAACCTCCCCTCCCTCCGCCGCGAATTCCTCCAACTCCAATCAATCCACCACCCAGATAAGCACCCA GCCGACGAAAAGGTCTCCGCAGAAGCCACCTCTGCCCTCATCAACCACGCCTACCACATCCTCTCAGACCCCCTC CTGCGCGCTCAATACCTCCTCAAACTGCGCAAAATCGACGTCAACGGCGATCGCCAGAAGACCATCGACGACGAA CCCCTCTGGGAAGTGGTCATGGAGGCCTTTGAGGCTGTCGATGCCGCTACCACACAGGCTGATCTCGACGCTCTT CGCAAACTGAATGAAACTCGCATCTCTACCTGTGAGCATGAACTCGACATTGCCTTTGCCAAAGACGACATGAAG GCCGCCACTCACATCACCATTCGACTGCTCTTTTGGGACAAGATCCGCGCCTGGATCGAGGAATGGAAGCCTCCG GCCGAAACCTCAACCTTCTCTCCTATCCAGCCTTGA |
| Transcript | >Ophcf2|07262 ATGGTGTTAAGATTTGCTCGTTTTGAGTGGCAGCCCACTATACTGAGCTTTTCCTCACCTCCCCCGACCCTCCCT CCACTCCACGACGAGTCCACACCAATCCATGACATCGTCAACCTTCATCATCAAACATCCACGACTCTCGATCGC CTCTCCAATGATGTCATCGTCTTTCCTCGCCGCCTCCCGCGCGAGTCGCAGCGCATCGATCCTCCTACGCCCCCT CCTACACCCCCGTCGTCTCCCCCTGATCGCCTCCGCCCCATCATCGTCATCAACGCCATCATCATCGTCGACGCC TTCATCAGCCCCATCATCAGCCTCATCATCGACCCCATCATCACCCCCCTCATCAGCCTCACCCCCATCCCCATC CCCATCCCAACCCCAAAGTACAATCTACGAACGCTTCCCCAAATCCCTCCCCTCCGGCCCCCCCCCTCCGGCCCC TTCCAAGTCAACCTCCCCTCCCTCCGCCGCGAATTCCTCCAACTCCAATCAATCCACCACCCAGATAAGCACCCA GCCGACGAAAAGGTCTCCGCAGAAGCCACCTCTGCCCTCATCAACCACGCCTACCACATCCTCTCAGACCCCCTC CTGCGCGCTCAATACCTCCTCAAACTGCGCAAAATCGACGTCAACGGCGATCGCCAGAAGACCATCGACGACGAA CCCCTCTGGGAAGTGGTCATGGAGGCCTTTGAGGCTGTCGATGCCGCTACCACACAGGCTGATCTCGACGCTCTT CGCAAACTGAATGAAACTCGCATCTCTACCTGTGAGCATGAACTCGACATTGCCTTTGCCAAAGACGACATGAAG GCCGCCACTCACATCACCATTCGACTGCTCTTTTGGGACAAGATCCGCGCCTGGATCGAGGAATGGAAGCCTCCG GCCGAAACCTCAACCTTCTCTCCTATCCAGCCTTGA |
| Gene | >Ophcf2|07262 ATGGTGTTAAGATTTGCTCGTTTTGAGTGGCAGCCCACTATACGTAGGTAGCAGGTACATACTTGTATGTAAGGC TGCTGCTAGCCGACGTCGGCGCACCGCTTCACCTCTTCACCGCCTTCCCCATTCGGATACCAACCAAGTGAGCTT TTCCTCACCTCCCCCGACCCTCCCTCCACTCCACGACGAGTCCACACCAATCCATGACATCGTCAACCTTCATCA TCAAACATCCACGACTCTCGATCGCCTCTCCAATGATGTCATCGTCTTTCCTCGCCGCCTCCCGCGCGAGTCGCA GCGCATCGATCCTCCTACGCCCCCTCCTACACCCCCGTCGTCTCCCCCTGATCGCCTCCGCCCCATCATCGTCAT CAACGCCATCATCATCGTCGACGCCTTCATCAGCCCCATCATCAGCCTCATCATCGACCCCATCATCACCCCCCT CATCAGCCTCACCCCCATCCCCATCCCCATCCCAACCCCAAAGTACAATCTACGAACGCTTCCCCAAATCCCTCC CCTCCGGCCCCCCCCCTCCGGCCCCTTCCAAGTCAACCTCCCCTCCCTCCGCCGCGAATTCCTCCAACTCCAATC AATCCACCACCCAGATAAGCACCCAGCCGACGAAAAGGTCTCCGCAGAAGCCACCTCTGCCCTCATCAACCACGC CTACCACATCCTCTCAGACCCCCTCCTGCGCGCTCAATACCTCCTCAAACTGCGCAAAATCGACGTCAACGGCGA TCGCCAGAAGACCATCGACGACGAACCCCTCTGGGAAGTGGTCATGGAGGCCTTTGAGGCTGTCGATGCCGCTAC CACACAGGCTGATCTCGACGCTCTTCGCAAACTGAATGAAACTCGCATCTCTACCTGTGAGCATGAACTCGACAT TGCCTTTGCCAAAGACGACATGAAGGCCGCCACTCACATCACCATTCGACTGCTCTTTTGGGACAAGATCCGCGC CTGGATCGAGGAATGGAAGCCTCCGGCCGAAACCTCAACCTTCTCTCCTATCCAGCCTTGA |