Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07260
Gene name
Locationscaffold_09:1048830..1049982
Strand-
Gene length (bp)1152
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12505 DUF3712 Protein of unknown function (DUF3712) 1.7E-13 122 242

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 32 54 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07260
MSHDSKNMVSQTENDAPPVGKKRGCLNHTKRFWWAYGLALCALIVLVVCLLIFVAVPKIAQKKMDAAVLDIQGVA
VRDTKPDGYRMDVNSTMETDGSMHADIDEFRADLVLTDVKDGLDPVFASLTFKKTPVEKLIKVNVSEEANITNRA
GFTMFNTLMYQRESVRVIVRGETRIKPAGLNRKYSVKLFRNYVFKGLNRFQGATVDGLVDITALKGTPNFKGKAV
IPNRSIFTLEIGNASFTNFADGQNLGTMTINNLVLRPGDNEVDVEAMLDQIKMLKIMTKRPYCETGIVPFDVLGT
KVVNNGEELDYFTKALGSANQTIDIDIGKILRKSLPDLPVACA*
Coding >Ophcf2|07260
ATGTCTCACGACTCCAAGAACATGGTCTCTCAGACGGAGAATGATGCTCCTCCTGTCGGCAAGAAGCGTGGCTGT
CTCAACCATACCAAGCGGTTCTGGTGGGCTTACGGCCTGGCTCTCTGTGCCTTGATCGTTCTCGTCGTTTGTCTA
CTCATCTTCGTCGCCGTTCCCAAAATCGCTCAGAAAAAGATGGACGCTGCTGTTCTCGACATTCAGGGCGTTGCC
GTCCGAGATACCAAGCCTGACGGGTATCGGATGGATGTCAACTCCACCATGGAGACTGATGGCTCTATGCATGCC
GACATTGACGAGTTCAGGGCCGACTTGGTCCTCACCGACGTTAAGGACGGTCTTGACCCTGTCTTTGCCTCGCTC
ACCTTCAAGAAAACCCCGGTTGAGAAGCTCATCAAGGTCAACGTCTCCGAGGAGGCAAACATCACAAACCGTGCG
GGCTTCACCATGTTCAACACGCTCATGTATCAGAGGGAGTCGGTCCGTGTCATCGTCAGGGGCGAGACTCGCATC
AAGCCGGCCGGTCTGAACAGGAAGTACTCGGTCAAGCTGTTCAGGAATTACGTCTTCAAGGGCTTGAATCGCTTT
CAGGGCGCGACGGTCGATGGCCTCGTTGACATCACTGCCCTCAAGGGAACTCCCAACTTCAAGGGCAAGGCCGTC
ATCCCTAACCGGTCCATCTTCACTCTCGAGATTGGAAACGCCTCCTTTACCAACTTTGCCGATGGCCAGAACCTC
GGAACCATGACCATCAATAACCTGGTTCTCAGACCGGGCGACAACGAGGTCGACGTCGAGGCTATGCTCGATCAG
ATCAAGATGCTGAAAATCATGACCAAGAGGCCCTATTGCGAGACGGGCATCGTGCCCTTTGATGTCCTGGGCACC
AAGGTTGTCAACAACGGCGAGGAACTCGACTACTTCACAAAGGCCCTCGGCAGCGCCAACCAGACCATTGACATT
GACATTGGCAAGATCCTCCGCAAGAGCTTGCCCGACCTGCCGGTGGCTTGCGCTTGA
Transcript >Ophcf2|07260
ATGTCTCACGACTCCAAGAACATGGTCTCTCAGACGGAGAATGATGCTCCTCCTGTCGGCAAGAAGCGTGGCTGT
CTCAACCATACCAAGCGGTTCTGGTGGGCTTACGGCCTGGCTCTCTGTGCCTTGATCGTTCTCGTCGTTTGTCTA
CTCATCTTCGTCGCCGTTCCCAAAATCGCTCAGAAAAAGATGGACGCTGCTGTTCTCGACATTCAGGGCGTTGCC
GTCCGAGATACCAAGCCTGACGGGTATCGGATGGATGTCAACTCCACCATGGAGACTGATGGCTCTATGCATGCC
GACATTGACGAGTTCAGGGCCGACTTGGTCCTCACCGACGTTAAGGACGGTCTTGACCCTGTCTTTGCCTCGCTC
ACCTTCAAGAAAACCCCGGTTGAGAAGCTCATCAAGGTCAACGTCTCCGAGGAGGCAAACATCACAAACCGTGCG
GGCTTCACCATGTTCAACACGCTCATGTATCAGAGGGAGTCGGTCCGTGTCATCGTCAGGGGCGAGACTCGCATC
AAGCCGGCCGGTCTGAACAGGAAGTACTCGGTCAAGCTGTTCAGGAATTACGTCTTCAAGGGCTTGAATCGCTTT
CAGGGCGCGACGGTCGATGGCCTCGTTGACATCACTGCCCTCAAGGGAACTCCCAACTTCAAGGGCAAGGCCGTC
ATCCCTAACCGGTCCATCTTCACTCTCGAGATTGGAAACGCCTCCTTTACCAACTTTGCCGATGGCCAGAACCTC
GGAACCATGACCATCAATAACCTGGTTCTCAGACCGGGCGACAACGAGGTCGACGTCGAGGCTATGCTCGATCAG
ATCAAGATGCTGAAAATCATGACCAAGAGGCCCTATTGCGAGACGGGCATCGTGCCCTTTGATGTCCTGGGCACC
AAGGTTGTCAACAACGGCGAGGAACTCGACTACTTCACAAAGGCCCTCGGCAGCGCCAACCAGACCATTGACATT
GACATTGGCAAGATCCTCCGCAAGAGCTTGCCCGACCTGCCGGTGGCTTGCGCTTGA
Gene >Ophcf2|07260
ATGTCTCACGACTCCAAGAACATGGTCTCTCAGACGGAGAATGATGCTCCTCCTGTCGGCAAGAAGCGTGGCTGT
CTCAACCATACCAAGCGGTTCTGGTGGGCTTACGGCCTGGCTCTCTGTGCCTTGATCGTTCTCGTCGTTTGTCTA
CTGTGAGGGGGGACCCCTTCTCAATGACGGGGGAAGACGGTCCTCGCTGACTCGTTGACTATACAGCATCTTCGT
CGCCGTTCCCAAAATCGCTCAGAAAAAGATGGACGCTGCTGTTCTCGACATTCAGGGCGTTGCCGTCCGAGATAC
CAAGCCTGACGGGTATCGGATGGATGTCAACTCCACCATGGAGACTGATGGCTCTATGCATGCCGACATTGACGA
GTTCAGGGCCGACTTGGTCCTCACCGACGTTAAGGACGGTCTTGACCCTGTCTTTGCCTCGCTCACCTTCAAGAA
AACCCCGGTTGAGAAGCTCATCAAGGTCAACGTCTCCGAGGAGGCAAACATCACAAACCGTGCGGGCTTCACCAT
GTTCAACACGCTCATGTATCAGAGGGAGTCGGTCCGTGTCATCGTCAGGGGCGAGACTCGCATCAAGCCGGCCGG
TCTGAACAGGAAGTACTCGGTCAAGCTGTTCAGGAATTACGTCTTCAAGGGCTTGAATCGCTTTCAGGGCGCGAC
GGTCGATGGCCTCGTTGACATCACTGCCCTCAAGGGAACTCCCAACTTCAAGGGCAAGGCCGTCATCCCTAACCG
GTCCATCTTCACTCTCGAGATTGTGGGTTTCCTCCATTCTGTTGTACGTTTCGGCATCGCTGACGACGTCACTTG
CAGGGAAACGCCTCCTTTACCAACTTTGCCGATGGCCAGAACCTCGGAACCATGACCATCAATAACCTGGTTCTC
AGACCGGGCGACAACGAGGTCGACGTCGAGGCTATGCTCGATCAGATCAAGATGCTGAAAATCATGACCAAGAGG
CCCTATTGCGAGACGGGCATCGTGCCCTTTGATGTCCTGGGCACCAAGGTTGTCAACAACGGCGAGGAACTCGAC
TACTTCACAAAGGCCCTCGGCAGCGCCAACCAGACCATTGACATTGACATTGGCAAGATCCTCCGCAAGAGCTTG
CCCGACCTGCCGGTGGCTTGCGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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