Protein ID | Ophcf2|07249 |
Gene name | |
Location | scaffold_09:1025098..1027462 |
Strand | - |
Gene length (bp) | 2364 |
Transcript length (bp) | 2364 |
Coding sequence length (bp) | 2364 |
Protein length (aa) | 788 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07724 | AAA_2 | AAA domain (Cdc48 subfamily) | 1.6E-43 | 511 | 683 |
PF17871 | AAA_lid_9 | AAA lid domain | 9.3E-36 | 255 | 357 |
PF10431 | ClpB_D2-small | C-terminal, D2-small domain, of ClpB protein | 5.5E-22 | 694 | 769 |
PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 3.3E-11 | 117 | 248 |
PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 1.3E-05 | 518 | 612 |
PF07728 | AAA_5 | AAA domain (dynein-related subfamily) | 2.0E-08 | 516 | 634 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005524 | ATP binding | Yes |
GO:0016887 | ATP hydrolysis activity | Yes |
GO:0097159 | organic cyclic compound binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0043168 | anion binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0005488 | binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0017111 | nucleoside-triphosphatase activity | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
GO:0003824 | catalytic activity | No |
GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
GO:0016787 | hydrolase activity | No |
GO:0003674 | molecular_function | No |
GO:0032553 | ribonucleotide binding | No |
GO:0017076 | purine nucleotide binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0000166 | nucleotide binding | No |
GO:0016462 | pyrophosphatase activity | No |
GO:0036094 | small molecule binding | No |
GO:0043167 | ion binding | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|07249 MQARKQLVTSAQRLAGATTRSTRPLARLGASQITYRSPLRLLPQLAVRNYASGQPQPPGGTYRMNLGGEQEKPAL EQYGIDLTARARDGKLDPVIGRDSEIQRTIQILSRRTKNNPVLIGNAGTGKTAILEGLAARIIQGDVPESIKNKR VISLDLGSLIAGAKFRGDFEERLKKVLDEVQKAQGQVILFIDELHTLLGLGKAEGSIDASNLLKPALARGELQCC GATTLNEYRQIEKDVALARRFQPIVVAEPTVEDTISILRGIKDKYEVHHGVRITDGALVAAATLSNRYITDRFLP DKAIDLMDEAASHLKLQHESKPEEIMHLDHKIMTVQIELESLRKEKDVASKERREKLEKDVKKYYEDISELNARW DKEKAEYGAVKKVQEDLDKAKFELDQAQRDGNFARASELRFGVIPDLEEKLPREGTTSQDGEEPSLVHDSVNADD IAAVVSRISGIPVSKLTSGHMEKLVHMEDSLREHVKGQDDAIKAVSDAVRLQRAGLSGENRPLASFFFLGPTGVG KTELCKKLAGFLFSTESAVVRFDMSEFQEKHTISRLIGAPSGYVGYEDAGQLTEAVRRKPYAVLLFDEFEKAHRD ISALLLQVLDEGYLTDAQGHKVDFRNTIIVLTSNLGANILVGNDALHPYKENAQGEMDPSVRTAVMDVVSNAYPP EFLNRIDSFIIFKRLALPAIRSIADLRISDLERRLSDRRIGLSVPDAARDWLADRGYDPKFGARPLNRLVTNEIG NRLADAIIRGGLRSGQVAEVAVAEDGKGLVVSAAGEQ* |
Coding | >Ophcf2|07249 ATGCAAGCCCGGAAGCAACTAGTCACCTCGGCTCAGCGCCTCGCCGGAGCCACGACGAGGTCTACCAGGCCTCTC GCCCGGCTCGGTGCAAGTCAAATCACCTATAGATCACCTTTACGACTACTCCCGCAACTCGCAGTACGAAACTAT GCCAGTGGCCAGCCCCAGCCGCCGGGGGGCACGTACCGGATGAATTTGGGAGGAGAGCAGGAGAAGCCGGCGCTG GAGCAGTATGGCATTGACCTGACTGCCAGGGCGAGAGACGGGAAGCTTGACCCGGTCATCGGAAGAGACTCTGAG ATTCAAAGAACCATACAAATCTTATCGCGTCGAACCAAGAACAACCCCGTCCTCATCGGAAACGCCGGCACGGGA AAGACGGCCATCCTCGAGGGCCTCGCCGCGCGAATCATCCAGGGCGATGTGCCGGAGAGCATCAAGAACAAGAGA GTCATCAGCCTGGACCTTGGATCGCTCATAGCGGGCGCCAAGTTCCGCGGCGACTTCGAAGAGCGGCTGAAAAAG GTGCTGGACGAGGTGCAAAAGGCCCAAGGACAGGTCATCTTGTTTATCGACGAGCTTCACACCCTTCTCGGTCTC GGTAAGGCTGAGGGATCCATCGATGCGTCCAACCTGTTGAAGCCTGCCCTGGCCCGCGGCGAATTACAGTGCTGC GGTGCTACGACACTCAACGAGTACCGCCAGATTGAAAAGGACGTCGCTCTCGCCAGACGATTCCAGCCCATTGTT GTGGCCGAGCCGACGGTCGAGGACACCATCAGCATCCTCCGAGGCATCAAGGACAAGTACGAGGTTCACCACGGC GTCCGGATCACCGACGGCGCTCTGGTGGCGGCCGCGACTCTCTCAAATCGTTACATCACGGACCGCTTCCTCCCG GACAAGGCCATCGACCTGATGGACGAAGCCGCCAGCCACCTCAAACTGCAACACGAATCGAAGCCGGAGGAAATC ATGCACCTCGACCACAAGATCATGACGGTGCAGATCGAGCTGGAAAGTCTCCGCAAAGAAAAGGACGTGGCGAGC AAAGAGAGACGGGAGAAGCTGGAAAAAGATGTCAAGAAGTACTACGAAGACATCTCAGAGCTCAACGCCCGCTGG GACAAGGAAAAGGCCGAGTACGGCGCGGTCAAAAAGGTACAGGAAGATCTGGACAAGGCCAAGTTCGAACTCGAC CAGGCCCAACGCGACGGCAACTTTGCCCGCGCCTCGGAGCTTCGCTTCGGCGTCATCCCCGACCTGGAAGAGAAA CTACCCAGAGAGGGAACGACGAGCCAGGACGGAGAGGAGCCGTCGCTTGTTCACGACTCGGTCAACGCAGACGAC ATTGCCGCCGTCGTCTCCCGCATCTCAGGCATCCCCGTTTCGAAATTGACGTCTGGACACATGGAGAAGCTGGTC CACATGGAAGACTCTTTACGCGAGCACGTCAAAGGCCAAGACGATGCCATAAAAGCCGTCTCAGACGCAGTTCGA CTCCAAAGGGCAGGCCTCAGCGGCGAAAACCGCCCACTAGCATCCTTCTTCTTCCTCGGCCCGACCGGCGTCGGC AAAACAGAACTCTGCAAGAAGCTAGCGGGCTTCCTCTTCTCAACCGAATCCGCCGTCGTCCGCTTCGACATGTCG GAGTTTCAAGAGAAGCACACCATCTCGCGACTCATAGGCGCTCCGTCAGGCTACGTAGGCTACGAAGACGCAGGA CAACTCACGGAAGCCGTCCGTCGGAAACCCTACGCCGTCCTCCTCTTCGACGAGTTCGAAAAGGCCCATCGCGAC ATCTCGGCCCTGCTTCTCCAGGTCTTGGACGAGGGATACCTCACCGACGCGCAGGGCCACAAGGTCGACTTCCGC AACACCATCATCGTGCTGACCTCCAACCTCGGAGCCAACATCCTCGTCGGAAACGACGCCCTACACCCCTACAAG GAAAACGCCCAAGGCGAGATGGATCCCTCGGTCCGCACCGCCGTAATGGACGTGGTCAGCAACGCCTACCCCCCC GAGTTCCTAAACCGAATAGACTCCTTCATCATCTTCAAGCGCCTCGCCCTCCCCGCCATCCGCTCCATCGCCGAC CTCCGCATCTCGGACCTGGAGCGCCGCCTCTCGGACCGCCGCATAGGCCTCTCCGTCCCCGACGCCGCACGGGAT TGGCTAGCGGACCGGGGCTACGACCCCAAGTTCGGCGCCAGGCCGCTCAACAGGCTCGTCACCAACGAGATCGGC AATAGGCTCGCCGACGCCATCATCCGGGGCGGGCTGCGGTCGGGACAGGTCGCCGAGGTGGCTGTTGCGGAGGAC GGCAAGGGATTGGTTGTTTCGGCCGCGGGTGAGCAGTGA |
Transcript | >Ophcf2|07249 ATGCAAGCCCGGAAGCAACTAGTCACCTCGGCTCAGCGCCTCGCCGGAGCCACGACGAGGTCTACCAGGCCTCTC GCCCGGCTCGGTGCAAGTCAAATCACCTATAGATCACCTTTACGACTACTCCCGCAACTCGCAGTACGAAACTAT GCCAGTGGCCAGCCCCAGCCGCCGGGGGGCACGTACCGGATGAATTTGGGAGGAGAGCAGGAGAAGCCGGCGCTG GAGCAGTATGGCATTGACCTGACTGCCAGGGCGAGAGACGGGAAGCTTGACCCGGTCATCGGAAGAGACTCTGAG ATTCAAAGAACCATACAAATCTTATCGCGTCGAACCAAGAACAACCCCGTCCTCATCGGAAACGCCGGCACGGGA AAGACGGCCATCCTCGAGGGCCTCGCCGCGCGAATCATCCAGGGCGATGTGCCGGAGAGCATCAAGAACAAGAGA GTCATCAGCCTGGACCTTGGATCGCTCATAGCGGGCGCCAAGTTCCGCGGCGACTTCGAAGAGCGGCTGAAAAAG GTGCTGGACGAGGTGCAAAAGGCCCAAGGACAGGTCATCTTGTTTATCGACGAGCTTCACACCCTTCTCGGTCTC GGTAAGGCTGAGGGATCCATCGATGCGTCCAACCTGTTGAAGCCTGCCCTGGCCCGCGGCGAATTACAGTGCTGC GGTGCTACGACACTCAACGAGTACCGCCAGATTGAAAAGGACGTCGCTCTCGCCAGACGATTCCAGCCCATTGTT GTGGCCGAGCCGACGGTCGAGGACACCATCAGCATCCTCCGAGGCATCAAGGACAAGTACGAGGTTCACCACGGC GTCCGGATCACCGACGGCGCTCTGGTGGCGGCCGCGACTCTCTCAAATCGTTACATCACGGACCGCTTCCTCCCG GACAAGGCCATCGACCTGATGGACGAAGCCGCCAGCCACCTCAAACTGCAACACGAATCGAAGCCGGAGGAAATC ATGCACCTCGACCACAAGATCATGACGGTGCAGATCGAGCTGGAAAGTCTCCGCAAAGAAAAGGACGTGGCGAGC AAAGAGAGACGGGAGAAGCTGGAAAAAGATGTCAAGAAGTACTACGAAGACATCTCAGAGCTCAACGCCCGCTGG GACAAGGAAAAGGCCGAGTACGGCGCGGTCAAAAAGGTACAGGAAGATCTGGACAAGGCCAAGTTCGAACTCGAC CAGGCCCAACGCGACGGCAACTTTGCCCGCGCCTCGGAGCTTCGCTTCGGCGTCATCCCCGACCTGGAAGAGAAA CTACCCAGAGAGGGAACGACGAGCCAGGACGGAGAGGAGCCGTCGCTTGTTCACGACTCGGTCAACGCAGACGAC ATTGCCGCCGTCGTCTCCCGCATCTCAGGCATCCCCGTTTCGAAATTGACGTCTGGACACATGGAGAAGCTGGTC CACATGGAAGACTCTTTACGCGAGCACGTCAAAGGCCAAGACGATGCCATAAAAGCCGTCTCAGACGCAGTTCGA CTCCAAAGGGCAGGCCTCAGCGGCGAAAACCGCCCACTAGCATCCTTCTTCTTCCTCGGCCCGACCGGCGTCGGC AAAACAGAACTCTGCAAGAAGCTAGCGGGCTTCCTCTTCTCAACCGAATCCGCCGTCGTCCGCTTCGACATGTCG GAGTTTCAAGAGAAGCACACCATCTCGCGACTCATAGGCGCTCCGTCAGGCTACGTAGGCTACGAAGACGCAGGA CAACTCACGGAAGCCGTCCGTCGGAAACCCTACGCCGTCCTCCTCTTCGACGAGTTCGAAAAGGCCCATCGCGAC ATCTCGGCCCTGCTTCTCCAGGTCTTGGACGAGGGATACCTCACCGACGCGCAGGGCCACAAGGTCGACTTCCGC AACACCATCATCGTGCTGACCTCCAACCTCGGAGCCAACATCCTCGTCGGAAACGACGCCCTACACCCCTACAAG GAAAACGCCCAAGGCGAGATGGATCCCTCGGTCCGCACCGCCGTAATGGACGTGGTCAGCAACGCCTACCCCCCC GAGTTCCTAAACCGAATAGACTCCTTCATCATCTTCAAGCGCCTCGCCCTCCCCGCCATCCGCTCCATCGCCGAC CTCCGCATCTCGGACCTGGAGCGCCGCCTCTCGGACCGCCGCATAGGCCTCTCCGTCCCCGACGCCGCACGGGAT TGGCTAGCGGACCGGGGCTACGACCCCAAGTTCGGCGCCAGGCCGCTCAACAGGCTCGTCACCAACGAGATCGGC AATAGGCTCGCCGACGCCATCATCCGGGGCGGGCTGCGGTCGGGACAGGTCGCCGAGGTGGCTGTTGCGGAGGAC GGCAAGGGATTGGTTGTTTCGGCCGCGGGTGAGCAGTGA |
Gene | >Ophcf2|07249 ATGCAAGCCCGGAAGCAACTAGTCACCTCGGCTCAGCGCCTCGCCGGAGCCACGACGAGGTCTACCAGGCCTCTC GCCCGGCTCGGTGCAAGTCAAATCACCTATAGATCACCTTTACGACTACTCCCGCAACTCGCAGTACGAAACTAT GCCAGTGGCCAGCCCCAGCCGCCGGGGGGCACGTACCGGATGAATTTGGGAGGAGAGCAGGAGAAGCCGGCGCTG GAGCAGTATGGCATTGACCTGACTGCCAGGGCGAGAGACGGGAAGCTTGACCCGGTCATCGGAAGAGACTCTGAG ATTCAAAGAACCATACAAATCTTATCGCGTCGAACCAAGAACAACCCCGTCCTCATCGGAAACGCCGGCACGGGA AAGACGGCCATCCTCGAGGGCCTCGCCGCGCGAATCATCCAGGGCGATGTGCCGGAGAGCATCAAGAACAAGAGA GTCATCAGCCTGGACCTTGGATCGCTCATAGCGGGCGCCAAGTTCCGCGGCGACTTCGAAGAGCGGCTGAAAAAG GTGCTGGACGAGGTGCAAAAGGCCCAAGGACAGGTCATCTTGTTTATCGACGAGCTTCACACCCTTCTCGGTCTC GGTAAGGCTGAGGGATCCATCGATGCGTCCAACCTGTTGAAGCCTGCCCTGGCCCGCGGCGAATTACAGTGCTGC GGTGCTACGACACTCAACGAGTACCGCCAGATTGAAAAGGACGTCGCTCTCGCCAGACGATTCCAGCCCATTGTT GTGGCCGAGCCGACGGTCGAGGACACCATCAGCATCCTCCGAGGCATCAAGGACAAGTACGAGGTTCACCACGGC GTCCGGATCACCGACGGCGCTCTGGTGGCGGCCGCGACTCTCTCAAATCGTTACATCACGGACCGCTTCCTCCCG GACAAGGCCATCGACCTGATGGACGAAGCCGCCAGCCACCTCAAACTGCAACACGAATCGAAGCCGGAGGAAATC ATGCACCTCGACCACAAGATCATGACGGTGCAGATCGAGCTGGAAAGTCTCCGCAAAGAAAAGGACGTGGCGAGC AAAGAGAGACGGGAGAAGCTGGAAAAAGATGTCAAGAAGTACTACGAAGACATCTCAGAGCTCAACGCCCGCTGG GACAAGGAAAAGGCCGAGTACGGCGCGGTCAAAAAGGTACAGGAAGATCTGGACAAGGCCAAGTTCGAACTCGAC CAGGCCCAACGCGACGGCAACTTTGCCCGCGCCTCGGAGCTTCGCTTCGGCGTCATCCCCGACCTGGAAGAGAAA CTACCCAGAGAGGGAACGACGAGCCAGGACGGAGAGGAGCCGTCGCTTGTTCACGACTCGGTCAACGCAGACGAC ATTGCCGCCGTCGTCTCCCGCATCTCAGGCATCCCCGTTTCGAAATTGACGTCTGGACACATGGAGAAGCTGGTC CACATGGAAGACTCTTTACGCGAGCACGTCAAAGGCCAAGACGATGCCATAAAAGCCGTCTCAGACGCAGTTCGA CTCCAAAGGGCAGGCCTCAGCGGCGAAAACCGCCCACTAGCATCCTTCTTCTTCCTCGGCCCGACCGGCGTCGGC AAAACAGAACTCTGCAAGAAGCTAGCGGGCTTCCTCTTCTCAACCGAATCCGCCGTCGTCCGCTTCGACATGTCG GAGTTTCAAGAGAAGCACACCATCTCGCGACTCATAGGCGCTCCGTCAGGCTACGTAGGCTACGAAGACGCAGGA CAACTCACGGAAGCCGTCCGTCGGAAACCCTACGCCGTCCTCCTCTTCGACGAGTTCGAAAAGGCCCATCGCGAC ATCTCGGCCCTGCTTCTCCAGGTCTTGGACGAGGGATACCTCACCGACGCGCAGGGCCACAAGGTCGACTTCCGC AACACCATCATCGTGCTGACCTCCAACCTCGGAGCCAACATCCTCGTCGGAAACGACGCCCTACACCCCTACAAG GAAAACGCCCAAGGCGAGATGGATCCCTCGGTCCGCACCGCCGTAATGGACGTGGTCAGCAACGCCTACCCCCCC GAGTTCCTAAACCGAATAGACTCCTTCATCATCTTCAAGCGCCTCGCCCTCCCCGCCATCCGCTCCATCGCCGAC CTCCGCATCTCGGACCTGGAGCGCCGCCTCTCGGACCGCCGCATAGGCCTCTCCGTCCCCGACGCCGCACGGGAT TGGCTAGCGGACCGGGGCTACGACCCCAAGTTCGGCGCCAGGCCGCTCAACAGGCTCGTCACCAACGAGATCGGC AATAGGCTCGCCGACGCCATCATCCGGGGCGGGCTGCGGTCGGGACAGGTCGCCGAGGTGGCTGTTGCGGAGGAC GGCAAGGGATTGGTTGTTTCGGCCGCGGGTGAGCAGTGA |