Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07247
Gene name
Locationscaffold_09:1021185..1021914
Strand-
Gene length (bp)729
Transcript length (bp)606
Coding sequence length (bp)606
Protein length (aa) 202

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01105 EMP24_GP25L emp24/gp25L/p24 family/GOLD 1.5E-45 20 196

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 169 191 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07247
MRPPSSLLAATLLASAAAAHNIVLPAHGLECFHENLHSEDTMTVTYQIGDREFGSAGNLDIDFWITNPVGGYEIS
EKTVSNGDHSFTAKHDGKYTYCFSNQHWGATSKEVSFNVHGIVYVSESDMPSDPIEVEVRHLSELLAQVKDEQQY
IIVREHTHRNTAESTNARVKWWNLFVIGVVVGESLFQIWWLRRFFEVKRVV*
Coding >Ophcf2|07247
ATGCGTCCGCCCTCATCCCTCCTGGCAGCAACGCTGCTCGCCTCCGCAGCAGCAGCGCACAACATCGTCCTCCCC
GCCCACGGCCTCGAATGCTTCCATGAGAATCTGCACAGCGAGGATACCATGACGGTGACGTACCAGATCGGGGAC
CGCGAGTTTGGCAGCGCAGGCAACCTCGATATCGACTTTTGGATAACCAACCCCGTCGGCGGCTACGAAATCAGC
GAAAAGACAGTCTCCAACGGCGACCACTCCTTCACCGCAAAGCACGACGGCAAATACACCTACTGCTTCAGCAAC
CAACACTGGGGCGCCACCAGCAAAGAAGTCTCCTTCAACGTCCACGGCATCGTCTACGTCAGCGAGTCCGACATG
CCCTCGGACCCCATCGAAGTAGAAGTCCGTCATCTCTCCGAACTCCTCGCCCAAGTCAAGGACGAGCAGCAGTAC
ATCATTGTTCGCGAACACACCCACCGCAACACCGCCGAGAGCACAAACGCCCGCGTCAAGTGGTGGAACCTCTTC
GTCATCGGCGTCGTCGTCGGCGAGTCGCTCTTCCAGATCTGGTGGCTACGTCGCTTCTTCGAGGTCAAGCGCGTC
GTTTGA
Transcript >Ophcf2|07247
ATGCGTCCGCCCTCATCCCTCCTGGCAGCAACGCTGCTCGCCTCCGCAGCAGCAGCGCACAACATCGTCCTCCCC
GCCCACGGCCTCGAATGCTTCCATGAGAATCTGCACAGCGAGGATACCATGACGGTGACGTACCAGATCGGGGAC
CGCGAGTTTGGCAGCGCAGGCAACCTCGATATCGACTTTTGGATAACCAACCCCGTCGGCGGCTACGAAATCAGC
GAAAAGACAGTCTCCAACGGCGACCACTCCTTCACCGCAAAGCACGACGGCAAATACACCTACTGCTTCAGCAAC
CAACACTGGGGCGCCACCAGCAAAGAAGTCTCCTTCAACGTCCACGGCATCGTCTACGTCAGCGAGTCCGACATG
CCCTCGGACCCCATCGAAGTAGAAGTCCGTCATCTCTCCGAACTCCTCGCCCAAGTCAAGGACGAGCAGCAGTAC
ATCATTGTTCGCGAACACACCCACCGCAACACCGCCGAGAGCACAAACGCCCGCGTCAAGTGGTGGAACCTCTTC
GTCATCGGCGTCGTCGTCGGCGAGTCGCTCTTCCAGATCTGGTGGCTACGTCGCTTCTTCGAGGTCAAGCGCGTC
GTTTGA
Gene >Ophcf2|07247
ATGCGTCCGCCCTCATCCCTCCTGGCAGCAACGCTGCTCGCCTCCGCAGCAGCAGCGCACAACATCGTCCTCCCC
GCCCACGGCCTCGAATGCTTCCATGAGAATCTGCACAGCGAGGATACCATGACGGTGACGTACCAGATCGGGGAC
CGCGAGTTTGGCAGCGCAGGCAACCTCGATATCGACTTTTGGGTACTTCCTTTTACTGCTTGGGGTAAATGAGGA
CAGCTGGCTTACGCAGATACATAGATAACCAACCCCGTCGGCGGCTACGAAATCAGCGAAAAGACAGTCTCCAAC
GGCGACCACTCCTTCACCGCAAAGCACGACGGCAAATACACCTACTGCTTCAGCAACCAACACTGGGGCGCCACC
AGCAAAGAAGTCTCCTTCAACGTCCACGGCATCGTCTACGTCAGCGAGTCCGACATGCCCTCGGACCCCATCGAA
GTAGAAGGTATCCATCCCATCTTCTTCTTCTCCTCTGCTCCCGGCCCCGGCTTCTGCTAAGCTACATCAACAGTC
CGTCATCTCTCCGAACTCCTCGCCCAAGTCAAGGACGAGCAGCAGTACATCATTGTTCGCGAACACACCCACCGC
AACACCGCCGAGAGCACAAACGCCCGCGTCAAGTGGTGGAACCTCTTCGTCATCGGCGTCGTCGTCGGCGAGTCG
CTCTTCCAGATCTGGTGGCTACGTCGCTTCTTCGAGGTCAAGCGCGTCGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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