Protein ID | Ophcf2|07246 |
Gene name | |
Location | scaffold_09:1017989..1020506 |
Strand | + |
Gene length (bp) | 2517 |
Transcript length (bp) | 2517 |
Coding sequence length (bp) | 2517 |
Protein length (aa) | 839 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11885 | DUF3405 | Protein of unknown function (DUF3405) | 3.0E-228 | 251 | 812 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 98 | 120 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|07246 MGPVSNPLRSREQRLPLYQKIDPSTKERYSDDGFESPISDTESDHTLAAVSPCRSRDVSHSASKSHFLLSRRRPV LSPLSPRKAALYPYRLPTRISRYVFLGVLGILVLMILSLIRASQVENWKVVNGKVSLAPPPPPVWEKFPFLERYY GGLRQLRPYNESEPQYPRPADPRSPPVLSRGRVAARDAVPPSKSWQHFPGRSAESDIRECFLDNDGKVRPPPLRY YEGRPLGFPENVAGSYDLLKLPQDICFERFGRLGPYGLGYSIGDGGLGTSEHGDREGSETVWEETRQVDYRRVDW ASVQRQCFDANADRFSELPESTPAPHGFYVGADRPTELQNRDVAVKRNSSGHGKFTRDDETDGLPIKKQARTAVV VRCWDEYLFREDDIANMRAMITELSLASGGRYDVHLLVQVKNDAHNPIWADHEAYEKRIRDSVPKEFQGLVTLWT ETQMLSLYQGIYDLWSRGPGLPVHGVYRGLAMAMQYFAYQHPEYDFFWQWEMDIRYTGHYHDLLSKIEDWAKEQP RKGLWERNSRFYIPSVHGSWDDFTQMTRVQTAMSADKDQVLGVVNAAKKTTERAKPVWGPLRPSDANDWFETEGD AMPETEYDDDRYQWGVGEEADYISLNPLFDPEGTTWLLKDDITGFNGSQPLPPRRASIITTARMSRRLLMAMHRT TAYKKQFAFPEMWPATVALHHGFKSVFAPHPMYVDRKWPVKYMAQVYNGGRDGTSGGARTSIFGEREHNMQGISW YYNSGFAPNLYRRWLGLTVNNDGGPDFETTADKTKKGSGVGAMPGGEGRMCLPPMLLHPVKDVEQPVQAPGDDVA RTGDELPIRDPAA* |
Coding | >Ophcf2|07246 ATGGGGCCTGTCTCAAACCCTCTGCGCTCCCGCGAGCAGCGGCTGCCGCTGTACCAAAAGATCGATCCCTCTACC AAGGAGAGATATTCCGACGACGGCTTCGAATCCCCCATATCCGACACCGAGTCCGATCATACGCTCGCTGCCGTC TCGCCCTGTCGATCTCGAGATGTCTCTCACTCGGCCTCCAAGAGCCACTTCTTGCTGTCCAGACGGCGGCCCGTC CTCTCTCCTCTCTCTCCCCGCAAGGCCGCCCTCTACCCCTATCGCCTGCCAACGAGGATTTCGCGCTATGTCTTC CTTGGCGTCCTCGGCATCCTCGTCCTCATGATCCTCAGCTTGATACGCGCCAGTCAGGTCGAGAACTGGAAGGTG GTCAACGGCAAGGTCAGCTTGGCGCCTCCTCCGCCCCCCGTCTGGGAAAAGTTTCCCTTTCTCGAGAGGTATTAT GGCGGTCTGCGGCAATTGAGACCTTACAACGAGAGCGAGCCTCAATACCCGCGACCCGCCGACCCTCGCTCTCCG CCGGTTCTGTCTCGGGGCCGAGTCGCGGCGCGAGACGCCGTGCCCCCGAGCAAGTCTTGGCAGCATTTCCCGGGG AGGAGCGCCGAGTCGGATATCCGGGAATGTTTCCTCGACAACGACGGCAAAGTGCGCCCTCCGCCTCTTCGCTAC TACGAGGGAAGACCCCTCGGCTTTCCCGAGAATGTGGCCGGCTCCTACGACCTGCTGAAGCTGCCTCAAGACATC TGCTTCGAGCGCTTCGGTCGACTGGGCCCTTACGGCCTGGGTTACTCCATCGGAGACGGTGGCCTCGGCACCAGC GAGCATGGCGACAGGGAGGGGTCGGAGACTGTCTGGGAAGAGACTCGGCAAGTCGACTATCGACGCGTCGACTGG GCCAGCGTCCAGCGCCAGTGCTTCGACGCCAATGCCGATCGCTTCAGTGAGCTGCCGGAGTCGACGCCGGCGCCG CATGGCTTCTATGTCGGTGCTGATCGACCGACGGAACTTCAAAATCGAGACGTTGCTGTCAAACGCAACAGCAGC GGCCATGGCAAGTTCACGAGGGACGACGAGACCGACGGCCTTCCGATTAAGAAGCAGGCCAGAACGGCCGTTGTC GTTCGATGCTGGGACGAGTACTTATTCCGCGAGGACGACATCGCCAACATGCGAGCCATGATCACGGAGCTGTCT CTGGCATCCGGCGGGCGTTACGACGTCCACCTACTGGTGCAGGTCAAGAACGACGCCCACAATCCCATTTGGGCG GATCATGAAGCCTACGAGAAGCGGATCCGTGATAGCGTGCCAAAGGAGTTTCAAGGATTGGTCACGCTATGGACT GAGACGCAGATGCTGTCGCTGTATCAGGGCATCTACGACCTGTGGAGTCGCGGTCCCGGACTGCCCGTCCACGGC GTCTACCGAGGGCTGGCGATGGCTATGCAATATTTCGCCTATCAGCACCCAGAGTACGACTTCTTCTGGCAGTGG GAGATGGACATTCGCTACACCGGTCACTATCACGACCTGCTGAGCAAGATCGAGGATTGGGCCAAGGAGCAGCCA AGGAAGGGTCTCTGGGAGCGCAACTCGCGCTTCTACATCCCCTCCGTTCACGGTTCCTGGGACGACTTTACGCAG ATGACGCGCGTGCAGACGGCGATGAGCGCGGACAAGGACCAGGTTCTTGGTGTCGTCAATGCGGCCAAGAAGACG ACGGAGCGTGCCAAGCCGGTATGGGGGCCCCTTCGCCCCTCAGACGCGAACGACTGGTTCGAGACGGAGGGCGAT GCCATGCCCGAGACGGAATACGATGACGATCGCTACCAGTGGGGCGTTGGGGAAGAGGCCGACTACATCTCGCTG AACCCGCTCTTCGACCCGGAGGGCACGACGTGGCTGCTCAAGGACGACATCACTGGCTTCAACGGGTCACAGCCG CTGCCTCCGCGACGGGCGTCTATCATCACGACGGCCCGCATGTCTCGCCGGCTGCTCATGGCTATGCACCGCACG ACGGCCTACAAGAAGCAGTTTGCCTTTCCCGAGATGTGGCCGGCGACGGTGGCCCTCCATCACGGCTTCAAGTCG GTCTTTGCGCCTCATCCGATGTACGTCGACCGCAAGTGGCCGGTCAAGTACATGGCACAAGTCTACAACGGAGGC CGTGATGGCACCAGCGGCGGCGCGCGGACGAGCATCTTTGGCGAGCGCGAGCACAACATGCAGGGCATCAGCTGG TACTACAACTCGGGCTTCGCGCCCAACCTGTACCGTCGCTGGCTCGGCCTCACCGTCAATAACGACGGCGGCCCC GACTTTGAGACGACGGCCGACAAGACGAAGAAGGGCTCTGGCGTCGGTGCCATGCCAGGAGGAGAGGGCCGCATG TGTCTTCCGCCCATGCTGCTCCATCCCGTCAAGGACGTCGAGCAGCCGGTTCAGGCGCCGGGAGATGACGTGGCC CGGACAGGGGACGAGCTGCCCATCCGGGATCCGGCCGCGTGA |
Transcript | >Ophcf2|07246 ATGGGGCCTGTCTCAAACCCTCTGCGCTCCCGCGAGCAGCGGCTGCCGCTGTACCAAAAGATCGATCCCTCTACC AAGGAGAGATATTCCGACGACGGCTTCGAATCCCCCATATCCGACACCGAGTCCGATCATACGCTCGCTGCCGTC TCGCCCTGTCGATCTCGAGATGTCTCTCACTCGGCCTCCAAGAGCCACTTCTTGCTGTCCAGACGGCGGCCCGTC CTCTCTCCTCTCTCTCCCCGCAAGGCCGCCCTCTACCCCTATCGCCTGCCAACGAGGATTTCGCGCTATGTCTTC CTTGGCGTCCTCGGCATCCTCGTCCTCATGATCCTCAGCTTGATACGCGCCAGTCAGGTCGAGAACTGGAAGGTG GTCAACGGCAAGGTCAGCTTGGCGCCTCCTCCGCCCCCCGTCTGGGAAAAGTTTCCCTTTCTCGAGAGGTATTAT GGCGGTCTGCGGCAATTGAGACCTTACAACGAGAGCGAGCCTCAATACCCGCGACCCGCCGACCCTCGCTCTCCG CCGGTTCTGTCTCGGGGCCGAGTCGCGGCGCGAGACGCCGTGCCCCCGAGCAAGTCTTGGCAGCATTTCCCGGGG AGGAGCGCCGAGTCGGATATCCGGGAATGTTTCCTCGACAACGACGGCAAAGTGCGCCCTCCGCCTCTTCGCTAC TACGAGGGAAGACCCCTCGGCTTTCCCGAGAATGTGGCCGGCTCCTACGACCTGCTGAAGCTGCCTCAAGACATC TGCTTCGAGCGCTTCGGTCGACTGGGCCCTTACGGCCTGGGTTACTCCATCGGAGACGGTGGCCTCGGCACCAGC GAGCATGGCGACAGGGAGGGGTCGGAGACTGTCTGGGAAGAGACTCGGCAAGTCGACTATCGACGCGTCGACTGG GCCAGCGTCCAGCGCCAGTGCTTCGACGCCAATGCCGATCGCTTCAGTGAGCTGCCGGAGTCGACGCCGGCGCCG CATGGCTTCTATGTCGGTGCTGATCGACCGACGGAACTTCAAAATCGAGACGTTGCTGTCAAACGCAACAGCAGC GGCCATGGCAAGTTCACGAGGGACGACGAGACCGACGGCCTTCCGATTAAGAAGCAGGCCAGAACGGCCGTTGTC GTTCGATGCTGGGACGAGTACTTATTCCGCGAGGACGACATCGCCAACATGCGAGCCATGATCACGGAGCTGTCT CTGGCATCCGGCGGGCGTTACGACGTCCACCTACTGGTGCAGGTCAAGAACGACGCCCACAATCCCATTTGGGCG GATCATGAAGCCTACGAGAAGCGGATCCGTGATAGCGTGCCAAAGGAGTTTCAAGGATTGGTCACGCTATGGACT GAGACGCAGATGCTGTCGCTGTATCAGGGCATCTACGACCTGTGGAGTCGCGGTCCCGGACTGCCCGTCCACGGC GTCTACCGAGGGCTGGCGATGGCTATGCAATATTTCGCCTATCAGCACCCAGAGTACGACTTCTTCTGGCAGTGG GAGATGGACATTCGCTACACCGGTCACTATCACGACCTGCTGAGCAAGATCGAGGATTGGGCCAAGGAGCAGCCA AGGAAGGGTCTCTGGGAGCGCAACTCGCGCTTCTACATCCCCTCCGTTCACGGTTCCTGGGACGACTTTACGCAG ATGACGCGCGTGCAGACGGCGATGAGCGCGGACAAGGACCAGGTTCTTGGTGTCGTCAATGCGGCCAAGAAGACG ACGGAGCGTGCCAAGCCGGTATGGGGGCCCCTTCGCCCCTCAGACGCGAACGACTGGTTCGAGACGGAGGGCGAT GCCATGCCCGAGACGGAATACGATGACGATCGCTACCAGTGGGGCGTTGGGGAAGAGGCCGACTACATCTCGCTG AACCCGCTCTTCGACCCGGAGGGCACGACGTGGCTGCTCAAGGACGACATCACTGGCTTCAACGGGTCACAGCCG CTGCCTCCGCGACGGGCGTCTATCATCACGACGGCCCGCATGTCTCGCCGGCTGCTCATGGCTATGCACCGCACG ACGGCCTACAAGAAGCAGTTTGCCTTTCCCGAGATGTGGCCGGCGACGGTGGCCCTCCATCACGGCTTCAAGTCG GTCTTTGCGCCTCATCCGATGTACGTCGACCGCAAGTGGCCGGTCAAGTACATGGCACAAGTCTACAACGGAGGC CGTGATGGCACCAGCGGCGGCGCGCGGACGAGCATCTTTGGCGAGCGCGAGCACAACATGCAGGGCATCAGCTGG TACTACAACTCGGGCTTCGCGCCCAACCTGTACCGTCGCTGGCTCGGCCTCACCGTCAATAACGACGGCGGCCCC GACTTTGAGACGACGGCCGACAAGACGAAGAAGGGCTCTGGCGTCGGTGCCATGCCAGGAGGAGAGGGCCGCATG TGTCTTCCGCCCATGCTGCTCCATCCCGTCAAGGACGTCGAGCAGCCGGTTCAGGCGCCGGGAGATGACGTGGCC CGGACAGGGGACGAGCTGCCCATCCGGGATCCGGCCGCGTGA |
Gene | >Ophcf2|07246 ATGGGGCCTGTCTCAAACCCTCTGCGCTCCCGCGAGCAGCGGCTGCCGCTGTACCAAAAGATCGATCCCTCTACC AAGGAGAGATATTCCGACGACGGCTTCGAATCCCCCATATCCGACACCGAGTCCGATCATACGCTCGCTGCCGTC TCGCCCTGTCGATCTCGAGATGTCTCTCACTCGGCCTCCAAGAGCCACTTCTTGCTGTCCAGACGGCGGCCCGTC CTCTCTCCTCTCTCTCCCCGCAAGGCCGCCCTCTACCCCTATCGCCTGCCAACGAGGATTTCGCGCTATGTCTTC CTTGGCGTCCTCGGCATCCTCGTCCTCATGATCCTCAGCTTGATACGCGCCAGTCAGGTCGAGAACTGGAAGGTG GTCAACGGCAAGGTCAGCTTGGCGCCTCCTCCGCCCCCCGTCTGGGAAAAGTTTCCCTTTCTCGAGAGGTATTAT GGCGGTCTGCGGCAATTGAGACCTTACAACGAGAGCGAGCCTCAATACCCGCGACCCGCCGACCCTCGCTCTCCG CCGGTTCTGTCTCGGGGCCGAGTCGCGGCGCGAGACGCCGTGCCCCCGAGCAAGTCTTGGCAGCATTTCCCGGGG AGGAGCGCCGAGTCGGATATCCGGGAATGTTTCCTCGACAACGACGGCAAAGTGCGCCCTCCGCCTCTTCGCTAC TACGAGGGAAGACCCCTCGGCTTTCCCGAGAATGTGGCCGGCTCCTACGACCTGCTGAAGCTGCCTCAAGACATC TGCTTCGAGCGCTTCGGTCGACTGGGCCCTTACGGCCTGGGTTACTCCATCGGAGACGGTGGCCTCGGCACCAGC GAGCATGGCGACAGGGAGGGGTCGGAGACTGTCTGGGAAGAGACTCGGCAAGTCGACTATCGACGCGTCGACTGG GCCAGCGTCCAGCGCCAGTGCTTCGACGCCAATGCCGATCGCTTCAGTGAGCTGCCGGAGTCGACGCCGGCGCCG CATGGCTTCTATGTCGGTGCTGATCGACCGACGGAACTTCAAAATCGAGACGTTGCTGTCAAACGCAACAGCAGC GGCCATGGCAAGTTCACGAGGGACGACGAGACCGACGGCCTTCCGATTAAGAAGCAGGCCAGAACGGCCGTTGTC GTTCGATGCTGGGACGAGTACTTATTCCGCGAGGACGACATCGCCAACATGCGAGCCATGATCACGGAGCTGTCT CTGGCATCCGGCGGGCGTTACGACGTCCACCTACTGGTGCAGGTCAAGAACGACGCCCACAATCCCATTTGGGCG GATCATGAAGCCTACGAGAAGCGGATCCGTGATAGCGTGCCAAAGGAGTTTCAAGGATTGGTCACGCTATGGACT GAGACGCAGATGCTGTCGCTGTATCAGGGCATCTACGACCTGTGGAGTCGCGGTCCCGGACTGCCCGTCCACGGC GTCTACCGAGGGCTGGCGATGGCTATGCAATATTTCGCCTATCAGCACCCAGAGTACGACTTCTTCTGGCAGTGG GAGATGGACATTCGCTACACCGGTCACTATCACGACCTGCTGAGCAAGATCGAGGATTGGGCCAAGGAGCAGCCA AGGAAGGGTCTCTGGGAGCGCAACTCGCGCTTCTACATCCCCTCCGTTCACGGTTCCTGGGACGACTTTACGCAG ATGACGCGCGTGCAGACGGCGATGAGCGCGGACAAGGACCAGGTTCTTGGTGTCGTCAATGCGGCCAAGAAGACG ACGGAGCGTGCCAAGCCGGTATGGGGGCCCCTTCGCCCCTCAGACGCGAACGACTGGTTCGAGACGGAGGGCGAT GCCATGCCCGAGACGGAATACGATGACGATCGCTACCAGTGGGGCGTTGGGGAAGAGGCCGACTACATCTCGCTG AACCCGCTCTTCGACCCGGAGGGCACGACGTGGCTGCTCAAGGACGACATCACTGGCTTCAACGGGTCACAGCCG CTGCCTCCGCGACGGGCGTCTATCATCACGACGGCCCGCATGTCTCGCCGGCTGCTCATGGCTATGCACCGCACG ACGGCCTACAAGAAGCAGTTTGCCTTTCCCGAGATGTGGCCGGCGACGGTGGCCCTCCATCACGGCTTCAAGTCG GTCTTTGCGCCTCATCCGATGTACGTCGACCGCAAGTGGCCGGTCAAGTACATGGCACAAGTCTACAACGGAGGC CGTGATGGCACCAGCGGCGGCGCGCGGACGAGCATCTTTGGCGAGCGCGAGCACAACATGCAGGGCATCAGCTGG TACTACAACTCGGGCTTCGCGCCCAACCTGTACCGTCGCTGGCTCGGCCTCACCGTCAATAACGACGGCGGCCCC GACTTTGAGACGACGGCCGACAAGACGAAGAAGGGCTCTGGCGTCGGTGCCATGCCAGGAGGAGAGGGCCGCATG TGTCTTCCGCCCATGCTGCTCCATCCCGTCAAGGACGTCGAGCAGCCGGTTCAGGCGCCGGGAGATGACGTGGCC CGGACAGGGGACGAGCTGCCCATCCGGGATCCGGCCGCGTGA |