Protein ID | Ophcf2|07237 |
Gene name | |
Location | scaffold_09:995357..997140 |
Strand | - |
Gene length (bp) | 1783 |
Transcript length (bp) | 1623 |
Coding sequence length (bp) | 1623 |
Protein length (aa) | 541 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 108 | 127 | 19 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 17.44 | 8.67 | 26.22 |
Alive | In ants, during behavior modification | 128.29 | 68.38 | 188.20 |
Dead | In ants, recently dead | 127.43 | 69.85 | 185.01 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.000238 | yes |
Alive | Dead | 0.978267 | no |
Dead | Fungus | 0.000238 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|07237 MTPKMMVAPPRINLRRAASYNNSQQQQHQHQHQHQHQQQQQQQQQQRQQQQHDAGGPLSATSRFGFEHVVFLASS PPPSPSLPRPRGRRTWSRAGARARTKKRRVRRVLCSGGVVLLALWIVARLFCRSGGSLADGPRPLLSHHRKPDPN YVDVDEAERAGLLPSAGAGAGAGAGAGAGTEQRSGHFVGLDVAAAAEKPVCTSSLTVLLESSDAGLGRSLLMLWM LYALAAEQQRAFFVDDSRWAYGRYGDLLQPPPLPACRPPPRHEMVPCPAQARHLVVSASTASDVLLEGGHGGEGS TRRLLGLAGVGYRRLFALVEDDAGYVERRVRQLRERAGGAPVVGLHIRRGDRHPFEFQYRDTYIPIEVFADRARG LVEAHYNETRTTKGGEAVTVLASDDPTVLHGQSDLSDAVLAQQRIRLASGAEEQPSKTRTSPDPRFMHRFTDEGH GWEGGFFSLVFWNLGAQRKNNAIPQDDDEAGGPPSDQTLRLRGFVARAYMMDLAVLAGASDKVVCAVSAMGCRLL AVMMGWERAFEQGGG* |
Coding | >Ophcf2|07237 ATGACGCCCAAGATGATGGTTGCGCCCCCGCGCATCAACCTGCGGCGCGCCGCCTCGTACAACAACAGCCAGCAA CAGCAGCATCAGCATCAGCATCAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGGCAGCAGCAG CAGCACGACGCAGGCGGGCCGCTATCCGCCACCTCTCGCTTCGGGTTCGAACACGTCGTCTTCCTAGCCTCGTCG CCGCCACCGTCTCCGAGTCTGCCGCGTCCACGGGGGAGGCGGACGTGGTCGCGGGCGGGTGCGAGGGCGAGGACG AAGAAGAGGAGGGTTAGGAGGGTGCTTTGCTCGGGGGGAGTGGTGCTGCTCGCGCTTTGGATCGTTGCCAGGCTG TTTTGTCGGTCGGGGGGGAGTTTGGCCGATGGACCGCGGCCGTTGTTATCCCATCATCGGAAGCCGGATCCGAAT TACGTCGACGTCGATGAGGCGGAGCGGGCTGGTCTTTTACCCTCCGCCGGAGCCGGAGCCGGAGCCGGAGCCGGA GCAGGAGCCGGGACGGAGCAACGGAGCGGACACTTTGTCGGGCTGGACGTCGCTGCCGCAGCGGAGAAGCCGGTC TGTACATCTTCGCTCACCGTCCTTCTCGAGAGTTCGGACGCGGGACTCGGTCGGTCGCTGTTGATGCTCTGGATG CTCTACGCGCTGGCCGCGGAACAGCAGAGGGCCTTTTTCGTCGACGACTCGCGTTGGGCTTATGGACGGTACGGC GATCTGCTGCAGCCGCCGCCTCTGCCGGCTTGCAGGCCTCCTCCTCGACACGAGATGGTGCCGTGTCCGGCCCAG GCGCGTCACCTTGTCGTCTCGGCGTCTACGGCCTCGGACGTGCTCCTCGAGGGGGGGCATGGAGGAGAGGGCAGT ACCAGGCGGTTGCTGGGGTTGGCGGGGGTCGGATACCGGCGGTTGTTTGCCCTGGTTGAAGACGATGCTGGCTAT GTTGAGAGGAGGGTGAGGCAGTTGAGGGAGAGGGCTGGGGGGGCGCCCGTCGTGGGTCTTCATATTCGGAGGGGG GATCGACATCCGTTCGAGTTTCAGTATCGCGATACGTATATCCCCATCGAGGTCTTTGCCGATCGGGCGAGGGGG TTGGTTGAGGCTCACTATAACGAGACGAGGACTACCAAGGGGGGGGAGGCTGTTACCGTTCTGGCATCTGATGAT CCGACTGTTCTCCATGGACAGAGCGATCTCTCCGACGCGGTTCTCGCTCAGCAGCGCATCCGTCTGGCATCCGGC GCCGAGGAACAACCCAGCAAGACGAGGACGAGTCCGGATCCTCGCTTCATGCACCGCTTCACAGACGAGGGCCAC GGCTGGGAAGGCGGCTTCTTCTCCCTCGTATTCTGGAACCTGGGCGCCCAACGAAAGAACAACGCCATTCCGCAA GACGACGACGAAGCCGGCGGGCCGCCCTCGGACCAGACCTTGCGGCTGAGAGGCTTCGTCGCGCGCGCCTACATG ATGGACTTGGCTGTGCTGGCGGGCGCGAGCGACAAGGTTGTCTGCGCCGTCAGCGCCATGGGGTGCAGGCTCTTG GCCGTCATGATGGGCTGGGAGCGGGCGTTTGAGCAGGGGGGTGGGTGA |
Transcript | >Ophcf2|07237 ATGACGCCCAAGATGATGGTTGCGCCCCCGCGCATCAACCTGCGGCGCGCCGCCTCGTACAACAACAGCCAGCAA CAGCAGCATCAGCATCAGCATCAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGGCAGCAGCAG CAGCACGACGCAGGCGGGCCGCTATCCGCCACCTCTCGCTTCGGGTTCGAACACGTCGTCTTCCTAGCCTCGTCG CCGCCACCGTCTCCGAGTCTGCCGCGTCCACGGGGGAGGCGGACGTGGTCGCGGGCGGGTGCGAGGGCGAGGACG AAGAAGAGGAGGGTTAGGAGGGTGCTTTGCTCGGGGGGAGTGGTGCTGCTCGCGCTTTGGATCGTTGCCAGGCTG TTTTGTCGGTCGGGGGGGAGTTTGGCCGATGGACCGCGGCCGTTGTTATCCCATCATCGGAAGCCGGATCCGAAT TACGTCGACGTCGATGAGGCGGAGCGGGCTGGTCTTTTACCCTCCGCCGGAGCCGGAGCCGGAGCCGGAGCCGGA GCAGGAGCCGGGACGGAGCAACGGAGCGGACACTTTGTCGGGCTGGACGTCGCTGCCGCAGCGGAGAAGCCGGTC TGTACATCTTCGCTCACCGTCCTTCTCGAGAGTTCGGACGCGGGACTCGGTCGGTCGCTGTTGATGCTCTGGATG CTCTACGCGCTGGCCGCGGAACAGCAGAGGGCCTTTTTCGTCGACGACTCGCGTTGGGCTTATGGACGGTACGGC GATCTGCTGCAGCCGCCGCCTCTGCCGGCTTGCAGGCCTCCTCCTCGACACGAGATGGTGCCGTGTCCGGCCCAG GCGCGTCACCTTGTCGTCTCGGCGTCTACGGCCTCGGACGTGCTCCTCGAGGGGGGGCATGGAGGAGAGGGCAGT ACCAGGCGGTTGCTGGGGTTGGCGGGGGTCGGATACCGGCGGTTGTTTGCCCTGGTTGAAGACGATGCTGGCTAT GTTGAGAGGAGGGTGAGGCAGTTGAGGGAGAGGGCTGGGGGGGCGCCCGTCGTGGGTCTTCATATTCGGAGGGGG GATCGACATCCGTTCGAGTTTCAGTATCGCGATACGTATATCCCCATCGAGGTCTTTGCCGATCGGGCGAGGGGG TTGGTTGAGGCTCACTATAACGAGACGAGGACTACCAAGGGGGGGGAGGCTGTTACCGTTCTGGCATCTGATGAT CCGACTGTTCTCCATGGACAGAGCGATCTCTCCGACGCGGTTCTCGCTCAGCAGCGCATCCGTCTGGCATCCGGC GCCGAGGAACAACCCAGCAAGACGAGGACGAGTCCGGATCCTCGCTTCATGCACCGCTTCACAGACGAGGGCCAC GGCTGGGAAGGCGGCTTCTTCTCCCTCGTATTCTGGAACCTGGGCGCCCAACGAAAGAACAACGCCATTCCGCAA GACGACGACGAAGCCGGCGGGCCGCCCTCGGACCAGACCTTGCGGCTGAGAGGCTTCGTCGCGCGCGCCTACATG ATGGACTTGGCTGTGCTGGCGGGCGCGAGCGACAAGGTTGTCTGCGCCGTCAGCGCCATGGGGTGCAGGCTCTTG GCCGTCATGATGGGCTGGGAGCGGGCGTTTGAGCAGGGGGGTGGGTGA |
Gene | >Ophcf2|07237 ATGACGCCCAAGATGATGGTTGCGCCCCCGCGCATCAACCTGCGGCGCGCCGCCTCGTACAACAACAGCCAGCAA CAGCAGCATCAGCATCAGCATCAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGGCAGCAGCAG CAGCACGACGCAGGCGGGCCGCTATCCGCCACCTCTCGCTTCGGGTTCGAACACGTCGTCTTCCTAGCCTCGTCG CCGCCACCGTCTCCGAGTCTGCCGCGTCCACGGGGGAGGCGGACGTGGTCGCGGGCGGGTGCGAGGGCGAGGACG AAGAAGAGGAGGGTTAGGAGGGTGCTTTGCTCGGGGGGAGTGGTGCTGCTCGCGCTTTGGATCGTTGCCAGGCTG TTTTGTCGGTCGGGGGGGAGGTTGGCAGGGGGAGAATCGAGTGCCTGATTTTCCGGCGCCGGTTGTGGTCGGGGG GAAGGTGACGAGATGGACTGTTTCGATTCCGAGGGGGGTTTCGTTTCCGCTTTCTATGTCGAGGTATGCTGCTAT GGCTCATCAGTGTCGACTTGTGGCTGCTAGTTTGGCCGATGGACCGCGGCCGTTGTTATCCCATCATCGGAAGCC GGATCCGAATTACGTCGACGTCGATGAGGCGGAGCGGGCTGGTCTTTTACCCTCCGCCGGAGCCGGAGCCGGAGC CGGAGCCGGAGCAGGAGCCGGGACGGAGCAACGGAGCGGACACTTTGTCGGGCTGGACGTCGCTGCCGCAGCGGA GAAGCCGGTCTGTACATCTTCGCTCACCGTCCTTCTCGAGAGTTCGGACGCGGGACTCGGTCGGTCGCTGTTGAT GCTCTGGATGCTCTACGCGCTGGCCGCGGAACAGCAGAGGGCCTTTTTCGTCGACGACTCGCGTTGGGCTTATGG ACGGTACGGCGATCTGCTGCAGCCGCCGCCTCTGCCGGCTTGCAGGCCTCCTCCTCGACACGAGATGGTGCCGTG TCCGGCCCAGGCGCGTCACCTTGTCGTCTCGGCGTCTACGGCCTCGGACGTGCTCCTCGAGGGGGGGCATGGAGG AGAGGGCAGTACCAGGCGGTTGCTGGGGTTGGCGGGGGTCGGATACCGGCGGTTGTTTGCCCTGGTTGAAGACGA TGCTGGCTATGTTGAGAGGAGGGTGAGGCAGTTGAGGGAGAGGGCTGGGGGGGCGCCCGTCGTGGGTCTTCATAT TCGGAGGGGGGATCGACATCCGTTCGAGTTTCAGTATCGCGATACGTATATCCCCATCGAGGTCTTTGCCGATCG GGCGAGGGGGTTGGTTGAGGCTCACTATAACGAGACGAGGACTACCAAGGGGGGGGAGGCTGTTACCGTTCTGGC ATCTGATGATCCGACTGTTCTCCATGGACAGAGCGATCTCTCCGACGCGGTTCTCGCTCAGCAGCGCATCCGTCT GGCATCCGGCGCCGAGGAACAACCCAGCAAGACGAGGACGAGTCCGGATCCTCGCTTCATGCACCGCTTCACAGA CGAGGGCCACGGCTGGGAAGGCGGCTTCTTCTCCCTCGTATTCTGGAACCTGGGCGCCCAACGAAAGAACAACGC CATTCCGCAAGACGACGACGAAGCCGGCGGGCCGCCCTCGGACCAGACCTTGCGGCTGAGAGGCTTCGTCGCGCG CGCCTACATGATGGACTTGGCTGTGCTGGCGGGCGCGAGCGACAAGGTTGTCTGCGCCGTCAGCGCCATGGGGTG CAGGCTCTTGGCCGTCATGATGGGCTGGGAGCGGGCGTTTGAGCAGGGGGGTGGGTGA |