Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07215
Gene name
Locationscaffold_09:943960..944784
Strand+
Gene length (bp)824
Transcript length (bp)765
Coding sequence length (bp)765
Protein length (aa) 255

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 131 153 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07215
MRASLPCLAIAALAVSVAAHPRPSQRRYSVVPLEPEDDDVTIVQTVVKTEPPVTHVVTTTAVPATVTVTSGTTQT
LSLAISSSISNSLIKSGSSFPSSTTTPSPCSTKPSPYQYPEHEAGHFAHLIIPDIAVIVIVAIFLTIILLTDTTI
IIVTVRTLAVVRIPNFPSAFIISIILARRSLASDKASVLELNSYRSVTASFASRERQGPDGSRRPRATAADANAL
QRNQALGHVARQLKAIIRNGNEIGVGECS*
Coding >Ophcf2|07215
ATGCGCGCCTCTCTTCCTTGTCTCGCCATCGCTGCGTTGGCGGTCTCCGTCGCGGCGCATCCTCGTCCCTCGCAG
CGAAGATATTCTGTCGTTCCCCTGGAGCCGGAAGATGACGATGTGACCATTGTGCAGACGGTTGTCAAGACGGAA
CCGCCCGTGACGCACGTCGTCACCACGACGGCTGTGCCAGCGACCGTCACCGTCACTTCGGGAACGACGCAGACG
CTCAGTTTGGCCATCTCTTCGTCGATCAGTAACAGTTTGATCAAGTCTGGTTCCTCGTTTCCATCTTCCACCACC
ACTCCGTCGCCCTGCTCTACCAAACCCTCTCCCTACCAATACCCGGAGCACGAAGCTGGCCATTTCGCGCATCTC
ATCATTCCTGACATTGCCGTCATCGTCATCGTCGCCATCTTTCTCACCATCATCCTTCTCACCGACACCACCATC
ATCATCGTCACCGTCCGCACCCTCGCCGTTGTCCGGATTCCCAACTTCCCTTCCGCCTTCATCATCAGCATCATC
TTGGCCCGGCGAAGTCTTGCCTCTGACAAAGCTTCCGTCTTGGAACTCAACTCGTACAGGTCGGTAACCGCGAGC
TTCGCGTCCAGGGAACGGCAGGGACCCGACGGGTCACGACGACCAAGAGCGACGGCGGCAGACGCCAACGCACTG
CAACGCAACCAAGCGCTGGGACACGTTGCCCGACAGCTGAAGGCTATCATTCGAAACGGCAACGAGATTGGCGTT
GGCGAATGTTCATAA
Transcript >Ophcf2|07215
ATGCGCGCCTCTCTTCCTTGTCTCGCCATCGCTGCGTTGGCGGTCTCCGTCGCGGCGCATCCTCGTCCCTCGCAG
CGAAGATATTCTGTCGTTCCCCTGGAGCCGGAAGATGACGATGTGACCATTGTGCAGACGGTTGTCAAGACGGAA
CCGCCCGTGACGCACGTCGTCACCACGACGGCTGTGCCAGCGACCGTCACCGTCACTTCGGGAACGACGCAGACG
CTCAGTTTGGCCATCTCTTCGTCGATCAGTAACAGTTTGATCAAGTCTGGTTCCTCGTTTCCATCTTCCACCACC
ACTCCGTCGCCCTGCTCTACCAAACCCTCTCCCTACCAATACCCGGAGCACGAAGCTGGCCATTTCGCGCATCTC
ATCATTCCTGACATTGCCGTCATCGTCATCGTCGCCATCTTTCTCACCATCATCCTTCTCACCGACACCACCATC
ATCATCGTCACCGTCCGCACCCTCGCCGTTGTCCGGATTCCCAACTTCCCTTCCGCCTTCATCATCAGCATCATC
TTGGCCCGGCGAAGTCTTGCCTCTGACAAAGCTTCCGTCTTGGAACTCAACTCGTACAGGTCGGTAACCGCGAGC
TTCGCGTCCAGGGAACGGCAGGGACCCGACGGGTCACGACGACCAAGAGCGACGGCGGCAGACGCCAACGCACTG
CAACGCAACCAAGCGCTGGGACACGTTGCCCGACAGCTGAAGGCTATCATTCGAAACGGCAACGAGATTGGCGTT
GGCGAATGTTCATAA
Gene >Ophcf2|07215
ATGCGCGCCTCTCTTCCTTGTCTCGCCATCGCTGCGTTGGCGGTCTCCGTCGCGGCGCATCCTCGTCCCTCGCAG
CGAAGATATTCTGTCGTTCCCCTGGAGCCGGAAGATGACGATGTGACCATTGTGCAGACGGTTGTCAAGACGGAA
CCGCCCGTGACGCACGTCGTCACCACGACGGCTGTGCCAGCGACCGTCACCGTCACTTCGGGAACGACGCAGACG
CTCAGTTTGGCCATCTCTTCGTCGATCAGTAACAGTTTGATCAAGTCTGGTTCCTCGTTTCCATCTTCCACCACC
ACTCCGTCGCCCTGCTCTACCAAACCCTCTGTGCAGACCGTCACATGGATTGCGTCGGCGACGTATGAGGCTGTC
ATCACCTTGGGTAGCCCTACCAATACCCGGAGCACGAAGCTGGCCATTTCGCGCATCTCATCATTCCTGACATTG
CCGTCATCGTCATCGTCGCCATCTTTCTCACCATCATCCTTCTCACCGACACCACCATCATCATCGTCACCGTCC
GCACCCTCGCCGTTGTCCGGATTCCCAACTTCCCTTCCGCCTTCATCATCAGCATCATCTTGGCCCGGCGAAGTC
TTGCCTCTGACAAAGCTTCCGTCTTGGAACTCAACTCGTACAGGTCGGTAACCGCGAGCTTCGCGTCCAGGGAAC
GGCAGGGACCCGACGGGTCACGACGACCAAGAGCGACGGCGGCAGACGCCAACGCACTGCAACGCAACCAAGCGC
TGGGACACGTTGCCCGACAGCTGAAGGCTATCATTCGAAACGGCAACGAGATTGGCGTTGGCGAATGTTCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail