Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07191
Gene name
Locationscaffold_09:872357..873160
Strand-
Gene length (bp)803
Transcript length (bp)693
Coding sequence length (bp)693
Protein length (aa) 231

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03987 Autophagy_act_C Autophagocytosis associated protein, active-site domain 1.2E-30 14 225

GO

GO Term Description Terminal node
GO:0019787 ubiquitin-like protein transferase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0140096 catalytic activity, acting on a protein No
GO:0016740 transferase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 58 0.45

Transmembrane Domains

Domain # Start End Length
1 207 229 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07191
MAGIKHFPSLDRAEFSTACHHLDRRYRQATLGPLRRQWRLRLCAALDHVFSIDGSYTTYVQITRPLEPMADCRDL
SDAMGRVSFEDHDGADADMIGAEESDSAVIVKDSPRGDVAHVVYEIHLHPTYRIPCLWFTLHHLQGDEAAFDIDT
VFRRLVPDEYKSRLRGQGAIGGISADHHPITGVPAFFIHPCLLGDAISGFQCSLENYLIIWLGLVGGCIGLWVPT
EMALQ*
Coding >Ophcf2|07191
ATGGCCGGAATCAAGCATTTTCCCTCGCTTGACCGAGCCGAATTCTCTACTGCTTGCCATCATCTCGATCGCCGA
TATCGTCAAGCAACACTGGGCCCTTTACGGAGGCAATGGAGGCTCAGACTGTGTGCCGCGCTCGACCACGTCTTT
TCCATCGACGGCAGCTACACCACCTATGTCCAGATCACGCGCCCTCTGGAGCCCATGGCGGATTGCCGTGATCTG
TCCGACGCCATGGGGAGAGTGTCTTTCGAGGACCACGACGGGGCAGACGCCGACATGATCGGTGCAGAGGAGTCT
GATTCGGCGGTCATCGTCAAAGACAGCCCACGTGGCGACGTTGCTCATGTTGTCTATGAGATTCATCTCCACCCG
ACCTACAGGATTCCCTGTCTCTGGTTCACCCTTCACCACCTCCAAGGGGATGAAGCCGCCTTTGACATCGACACA
GTCTTTCGCCGCCTGGTTCCCGACGAGTACAAGAGTAGGCTCCGAGGACAAGGCGCCATAGGGGGTATATCGGCC
GACCATCACCCCATCACGGGGGTGCCAGCCTTCTTCATCCATCCATGCCTTCTCGGAGACGCCATATCGGGATTC
CAATGTTCCCTCGAAAACTATCTCATCATCTGGCTCGGACTCGTCGGGGGGTGCATCGGCCTCTGGGTGCCGACA
GAAATGGCCTTACAGTAG
Transcript >Ophcf2|07191
ATGGCCGGAATCAAGCATTTTCCCTCGCTTGACCGAGCCGAATTCTCTACTGCTTGCCATCATCTCGATCGCCGA
TATCGTCAAGCAACACTGGGCCCTTTACGGAGGCAATGGAGGCTCAGACTGTGTGCCGCGCTCGACCACGTCTTT
TCCATCGACGGCAGCTACACCACCTATGTCCAGATCACGCGCCCTCTGGAGCCCATGGCGGATTGCCGTGATCTG
TCCGACGCCATGGGGAGAGTGTCTTTCGAGGACCACGACGGGGCAGACGCCGACATGATCGGTGCAGAGGAGTCT
GATTCGGCGGTCATCGTCAAAGACAGCCCACGTGGCGACGTTGCTCATGTTGTCTATGAGATTCATCTCCACCCG
ACCTACAGGATTCCCTGTCTCTGGTTCACCCTTCACCACCTCCAAGGGGATGAAGCCGCCTTTGACATCGACACA
GTCTTTCGCCGCCTGGTTCCCGACGAGTACAAGAGTAGGCTCCGAGGACAAGGCGCCATAGGGGGTATATCGGCC
GACCATCACCCCATCACGGGGGTGCCAGCCTTCTTCATCCATCCATGCCTTCTCGGAGACGCCATATCGGGATTC
CAATGTTCCCTCGAAAACTATCTCATCATCTGGCTCGGACTCGTCGGGGGGTGCATCGGCCTCTGGGTGCCGACA
GAAATGGCCTTACAGTAG
Gene >Ophcf2|07191
ATGGCCGGAATCAAGCATTTTCCCTCGCTTGACCGAGCCGAATTCTCTACTGCTTGCCATCATCTCGATCGCCGA
TATCGTCAAGCAACACTGGGCCCTTTACGGAGGCAATGGAGGCTCAGACTGTGTGCCGCGCTCGACCACGTCTTT
TCCATCGACGGCAGCTACACCACCTATGTCCAGATCACGCGCCCTCTGGAGCCCATGGCGGATTGCCGTGATCTG
TCCGACGCCATGGGGAGAGTGTCTTTCGAGGACCACGACGGGGCAGACGCCGACATGATCGGTGCAGAGGAGTCT
GATTCGGTACGGGATGCTCCATCGTCTCATCTGCTTTTCACGTGCCCTGACCAGTCCCAGGCGGTCATCGTCAAA
GACAGCCCACGTGGCGACGTTGCTCATGTTGTCTATGAGATTCATCTCCACCCGACCTACAGGATTCCCTGTCTC
TGGTTCACCCTTCACCACCTCCAAGGGGATGAAGCCGCCTTTGACATCGACACAGTCTTTCGCCGCCTGGTTCCC
GACGAGTACAAGAGTAGGCTCCGAGGACAAGGCGCCATAGGGGGTATATCGGCCGACGTAAGTCTGCAAGCCTAA
CAGTATCGACCGGGTCAGCGCTGACGGTCCCGTCTCAGCATCACCCCATCACGGGGGTGCCAGCCTTCTTCATCC
ATCCATGCCTTCTCGGAGACGCCATATCGGGATTCCAATGTTCCCTCGAAAACTATCTCATCATCTGGCTCGGAC
TCGTCGGGGGGTGCATCGGCCTCTGGGTGCCGACAGAAATGGCCTTACAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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