Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07160
Gene name
Locationscaffold_09:785993..787352
Strand-
Gene length (bp)1359
Transcript length (bp)1185
Coding sequence length (bp)1185
Protein length (aa) 395

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 10 30 20
2 43 65 22
3 93 115 22
4 122 144 22
5 172 194 22
6 206 228 22
7 248 270 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07160
MATISGMRLFSVQLTLLIICLLITGLRTYVKACMARRLASEDWFILLAMTTFAVSISIAMRGATFGAFGQSRSTA
ASPQRAVASLEGIYFCELLYAPTTLAVRTSICLFLLKIVRLKVHKRFIYGLLVVVSAAAAAYWLITLLQCFPPSF
FWDQARPDSKGRCIDPEVLLLAGYIYGSISALSDVVVGTLPILILWQTRLDLRTKLAVVGLLGMSIFASVAVIIR
MTTLSSIATQSQQFFRLTMNTALWSIIEPAVGIVAASLPTLRPLVKKLQLRCRVSRPSTPRIVLTGHRSRPLHLM
PHWLELKTRNTSDGARAELGMAPKMPASSIPREWTSCNVAVDQSRFLETPVPGAITVHTAIEVMTRARRSSDASQ
CQSTGWRRSQVPEGHIAVL*
Coding >Ophcf2|07160
ATGGCCACCATCTCTGGCATGCGGCTCTTTAGCGTTCAGCTCACTCTCTTGATCATATGTCTACTGATTACGGGC
CTGAGAACGTATGTCAAGGCCTGTATGGCTCGAAGACTGGCTTCTGAGGATTGGTTTATCCTCCTGGCCATGACC
ACTTTCGCCGTCTCCATCTCCATCGCCATGAGAGGAGCCACATTCGGCGCCTTTGGACAGAGCAGAAGCACCGCC
GCGTCTCCTCAGAGAGCCGTGGCGTCTCTCGAGGGCATCTACTTCTGCGAGCTGCTGTACGCACCCACGACGCTC
GCCGTCAGGACCTCCATCTGTCTATTCCTTCTCAAGATTGTTCGACTCAAGGTGCACAAGAGATTCATCTACGGG
CTGCTGGTCGTCGTCTCAGCCGCCGCCGCCGCTTACTGGCTCATCACCCTCCTCCAGTGCTTTCCGCCCTCGTTC
TTCTGGGACCAGGCGCGGCCGGACTCCAAGGGACGTTGCATCGACCCGGAGGTTCTCCTTCTGGCTGGATACATC
TATGGCTCCATCTCTGCCTTGTCAGATGTCGTCGTCGGGACGCTGCCCATCCTCATTCTGTGGCAGACGCGCCTC
GACCTTCGAACCAAACTCGCCGTCGTTGGCCTTTTGGGGATGAGCATATTTGCCAGTGTTGCCGTCATCATCCGC
ATGACGACGCTTTCCTCAATCGCCACGCAGTCTCAGCAATTCTTCCGCTTAACCATGAACACAGCCCTCTGGTCC
ATCATCGAGCCCGCCGTCGGCATCGTGGCCGCTTCACTGCCGACTTTGCGCCCCCTCGTCAAGAAGCTCCAGCTC
CGATGCCGCGTCAGCAGACCATCCACCCCAAGAATTGTCCTCACTGGCCATCGCTCCCGACCTCTGCACTTGATG
CCACATTGGCTGGAGCTGAAGACGCGGAATACGTCCGACGGGGCTCGCGCAGAGCTCGGTATGGCTCCCAAGATG
CCCGCGTCAAGCATTCCCAGAGAGTGGACTTCGTGCAACGTCGCCGTCGATCAAAGCCGATTTCTCGAGACGCCG
GTCCCGGGAGCCATCACAGTTCACACTGCCATCGAGGTCATGACCCGAGCGCGACGCTCTTCAGACGCCAGTCAA
TGCCAATCGACGGGGTGGCGACGCAGTCAAGTTCCGGAGGGACATATCGCGGTCCTTTGA
Transcript >Ophcf2|07160
ATGGCCACCATCTCTGGCATGCGGCTCTTTAGCGTTCAGCTCACTCTCTTGATCATATGTCTACTGATTACGGGC
CTGAGAACGTATGTCAAGGCCTGTATGGCTCGAAGACTGGCTTCTGAGGATTGGTTTATCCTCCTGGCCATGACC
ACTTTCGCCGTCTCCATCTCCATCGCCATGAGAGGAGCCACATTCGGCGCCTTTGGACAGAGCAGAAGCACCGCC
GCGTCTCCTCAGAGAGCCGTGGCGTCTCTCGAGGGCATCTACTTCTGCGAGCTGCTGTACGCACCCACGACGCTC
GCCGTCAGGACCTCCATCTGTCTATTCCTTCTCAAGATTGTTCGACTCAAGGTGCACAAGAGATTCATCTACGGG
CTGCTGGTCGTCGTCTCAGCCGCCGCCGCCGCTTACTGGCTCATCACCCTCCTCCAGTGCTTTCCGCCCTCGTTC
TTCTGGGACCAGGCGCGGCCGGACTCCAAGGGACGTTGCATCGACCCGGAGGTTCTCCTTCTGGCTGGATACATC
TATGGCTCCATCTCTGCCTTGTCAGATGTCGTCGTCGGGACGCTGCCCATCCTCATTCTGTGGCAGACGCGCCTC
GACCTTCGAACCAAACTCGCCGTCGTTGGCCTTTTGGGGATGAGCATATTTGCCAGTGTTGCCGTCATCATCCGC
ATGACGACGCTTTCCTCAATCGCCACGCAGTCTCAGCAATTCTTCCGCTTAACCATGAACACAGCCCTCTGGTCC
ATCATCGAGCCCGCCGTCGGCATCGTGGCCGCTTCACTGCCGACTTTGCGCCCCCTCGTCAAGAAGCTCCAGCTC
CGATGCCGCGTCAGCAGACCATCCACCCCAAGAATTGTCCTCACTGGCCATCGCTCCCGACCTCTGCACTTGATG
CCACATTGGCTGGAGCTGAAGACGCGGAATACGTCCGACGGGGCTCGCGCAGAGCTCGGTATGGCTCCCAAGATG
CCCGCGTCAAGCATTCCCAGAGAGTGGACTTCGTGCAACGTCGCCGTCGATCAAAGCCGATTTCTCGAGACGCCG
GTCCCGGGAGCCATCACAGTTCACACTGCCATCGAGGTCATGACCCGAGCGCGACGCTCTTCAGACGCCAGTCAA
TGCCAATCGACGGGGTGGCGACGCAGTCAAGTTCCGGAGGGACATATCGCGGTCCTTTGA
Gene >Ophcf2|07160
ATGGCCACCATCTCTGGCATGCGGCTCTTTAGCGTTCAGCTCACTCTCTTGATCATATGTCTACTGATTACGGGC
CTGAGAACGTATGTCAAGGCCTGTATGGCTCGAAGACTGGCTTCTGAGGATTGGTTTATCCTCCTGGCCATGGTA
TGAAAATTCTTCATCTTGCGGGTTTTGTGGCTAGAGACTCAAGACCTTCCTGTCAGACCACTTTCGCCGTCTCCA
TCTCCATCGCCATGAGAGGAGCCACATTCGGCGCCTTTGGACAGAGCAGAAGCACCGCCGCGTCTCCTCAGAGAG
CCGTGGCGTCTCTCGAGGGCATCTACTTCTGCGAGCTGCTGTACGCACCCACGACGCTCGCCGTCAGGACCTCCA
TCTGTCTATTCCTTCTCAAGATTGTTCGACTCAAGGTGCACAAGAGATTCATCTACGGGCTGCTGGTCGTCGTCT
CAGCCGCCGCCGCCGCTTACTGGCTCATCACCCTCCTCCAGTGCTTTCCGCCCTCGTTCTTCTGGGACCAGGCGC
GGCCGGACTCCAAGGGACGTTGCATCGACCCGGAGGTTCTCCTTCTGGCTGGATACATCTATGGCTCCATCTCTG
CCTTGTCAGATGTCGTCGTCGGGACGCTGCCCATCCTCATTCTGTGGCAGACGCGCCTCGACCTTCGAACCAAAC
TCGCCGTCGTTGGCCTTTTGGGGATGAGCATATTGTGAGACCATGAAGCTGCTTCTCAACGACGACTAACACACA
TCAGTGCCAGTGTTGCCGTCATCATCCGCATGACGACGCTTTCCTCAATCGCCACGCAGTCTCAGCAATTCTTCC
GCTTAACCATGTAACCTAGAGCTGAAGACTTCTTCGAATCTCGCTCGCCACGACCCTTGACTAATTCGGTTCACG
TTCAGGAACACAGCCCTCTGGTCCATCATCGAGCCCGCCGTCGGCATCGTGGCCGCTTCACTGCCGACTTTGCGC
CCCCTCGTCAAGAAGCTCCAGCTCCGATGCCGCGTCAGCAGACCATCCACCCCAAGAATTGTCCTCACTGGCCAT
CGCTCCCGACCTCTGCACTTGATGCCACATTGGCTGGAGCTGAAGACGCGGAATACGTCCGACGGGGCTCGCGCA
GAGCTCGGTATGGCTCCCAAGATGCCCGCGTCAAGCATTCCCAGAGAGTGGACTTCGTGCAACGTCGCCGTCGAT
CAAAGCCGATTTCTCGAGACGCCGGTCCCGGGAGCCATCACAGTTCACACTGCCATCGAGGTCATGACCCGAGCG
CGACGCTCTTCAGACGCCAGTCAATGCCAATCGACGGGGTGGCGACGCAGTCAAGTTCCGGAGGGACATATCGCG
GTCCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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