© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|07146 |
| Gene name | |
| Location | scaffold_09:741138..743968 |
| Strand | - |
| Gene length (bp) | 2830 |
| Transcript length (bp) | 2772 |
| Coding sequence length (bp) | 2772 |
| Protein length (aa) | 924 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 1.2E-28 | 108 | 246 |
| PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 8.8E-24 | 741 | 903 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 29 | 17 |
| 2 | 100 | 122 | 22 |
| 3 | 129 | 151 | 22 |
| 4 | 173 | 195 | 22 |
| 5 | 208 | 230 | 22 |
| 6 | 235 | 252 | 17 |
| 7 | 560 | 579 | 19 |
| 8 | 670 | 692 | 22 |
| 9 | 705 | 727 | 22 |
| 10 | 737 | 759 | 22 |
| 11 | 766 | 788 | 22 |
| 12 | 803 | 825 | 22 |
| 13 | 855 | 877 | 22 |
| 14 | 887 | 909 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 55.55 | 31.03 | 80.07 |
| Alive | In ants, during behavior modification | 126.16 | 62.06 | 190.26 |
| Dead | In ants, recently dead | 116.35 | 59.44 | 173.26 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.000238 | yes |
| Alive | Dead | 0.720631 | no |
| Dead | Fungus | 0.000238 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|07146 MLSNRSRPPSRPFVVALVALALLTAYSFLNRGPSPDPSSSSHDGSYPAHIRRHHHDDTACRNIDAVADKCAFVKR HCADVDASLIPYLELYYCTHQSARPLSFSLLVAWLGLLFSTIGIAASDFFCVNLATISAVLGLSQSLAGVTFLAL GNGSPDVFSTFAAMSSNSPGMAIGELIGAASFIAGVVAGSMALVREFRVDRKTYARDICFFIVAVAFTMAFLADG NLHIWECCVMIGYYALYVITVVVSHWYDVRARRELRRDTESRSHVYVMDGHAEELAGEPYRDDDRSPLPVTPVTL EAGSLVDDDGHHERLAAAEVTNNMRVVRSSHKRPPITTPIRPSLVGALEFRAALAQLQRESNLHLSPLLVRGQSQ SRPLLRRGTTCNALFGGSDDGTGVSTPVPSLARRDRALSSSDIPVASTVVPADLMDARLGSTGSRFLTPEAAQPE RTNPSPTPSLPVIAVEPPDETNHEPSRESIPKLRLEIPGHSRSPSATSSPETAFPRYVDPSALGDDDVQPPAPVS VRWWPYRVLPPPDVLLATLFPTLQGWREKSYWDRLLSAISVPSIFLLVITLPVVDMEATEEATMERDLLSDGPSY GAMEGSAPAISVIPADAQAETGWENYRLSPAADPSAEAMEGVASRGSVMSAKAPSEIRSASKGSKEPPSWNRWLV CVQLFSGPLFSTLILWANMREDMGRPVRELVRMVAFSLLLSALLLAVVLMTTTGQRRPRLHYLLCFLGFVISVAW ISTIAGEVVGVLKAFGVILGISEALLGLTVFAAGNSIGDLVADITVARLGYPVMALSACFGGPMLNILLGIGIGG VMMMMKQANKEHGQHPGEPMRYGPYRMQMGATLFVSGVTLLLMLVVLVVLVPMNKWILSRRIGWLVIMMWVVSTA VSVVVELTGKSSGLASVDVEWLP* |
| Coding | >Ophcf2|07146 ATGCTCTCTAACCGCTCCAGACCCCCGTCACGCCCCTTTGTCGTCGCCCTCGTCGCCCTCGCCCTCCTGACGGCC TATTCGTTCCTCAACCGAGGCCCTTCACCCGACCCGTCCTCCTCTTCCCATGATGGGTCTTATCCCGCCCATATC CGCCGTCACCATCATGACGACACGGCCTGTCGCAACATCGACGCCGTCGCCGACAAGTGCGCCTTTGTCAAGCGT CACTGCGCCGACGTCGACGCCAGCCTCATCCCCTATCTCGAGCTCTACTACTGCACCCATCAGAGCGCGAGACCC CTCTCCTTCTCCCTCCTCGTCGCCTGGCTCGGTCTGCTCTTTTCCACCATCGGCATCGCTGCCAGCGACTTCTTC TGCGTCAACCTCGCCACCATCTCCGCCGTCCTCGGCCTGAGCCAGAGCCTCGCCGGCGTCACCTTTCTCGCCCTC GGCAACGGCTCCCCCGATGTCTTCAGCACCTTTGCCGCCATGAGTTCAAACAGCCCCGGCATGGCCATAGGCGAG CTCATCGGCGCTGCCAGCTTCATCGCCGGCGTCGTTGCCGGTTCCATGGCCCTCGTTCGCGAGTTCCGCGTCGAC CGCAAGACGTACGCACGCGATATTTGCTTCTTCATCGTCGCCGTCGCCTTCACCATGGCCTTCCTGGCCGACGGC AACCTTCACATCTGGGAGTGCTGTGTCATGATCGGCTATTACGCGCTCTACGTCATCACCGTCGTCGTCAGTCAC TGGTACGATGTCAGGGCCAGGCGCGAGCTCCGGCGAGACACAGAGTCTCGCAGCCACGTCTATGTCATGGATGGT CACGCTGAGGAGCTGGCGGGCGAGCCCTATCGAGACGACGACCGTTCGCCCTTGCCCGTCACCCCCGTCACTCTC GAAGCCGGCTCGCTCGTTGATGACGACGGCCATCACGAACGGTTGGCAGCGGCCGAGGTGACGAATAATATGCGC GTCGTGCGATCGAGCCATAAGCGGCCTCCGATCACGACTCCCATCCGTCCGAGTCTGGTGGGCGCTCTCGAATTC CGCGCTGCTCTGGCCCAGCTCCAGCGCGAGAGCAACCTGCATCTCTCGCCCCTGCTGGTCCGGGGCCAGTCCCAG TCTCGGCCCCTGCTGCGGCGTGGGACAACGTGCAATGCCCTGTTCGGGGGTAGCGACGACGGCACCGGTGTCTCG ACTCCCGTGCCCAGCCTCGCACGCAGGGATCGCGCCCTGTCGTCGAGCGACATACCGGTCGCTTCCACCGTCGTC CCCGCTGATCTCATGGACGCACGCCTCGGCAGTACGGGGTCTCGGTTTCTGACGCCCGAGGCGGCCCAGCCGGAG CGGACGAATCCGTCGCCAACGCCCTCGTTGCCCGTCATAGCAGTCGAGCCACCCGACGAGACGAATCATGAACCG TCGCGGGAATCCATCCCGAAGCTGAGGCTGGAGATACCGGGCCATTCGAGGAGTCCCAGTGCAACGTCGTCGCCT GAAACGGCTTTCCCCCGCTACGTCGATCCGAGCGCGCTCGGAGACGACGACGTCCAGCCTCCGGCCCCTGTTTCG GTCCGATGGTGGCCGTATCGGGTGCTTCCCCCGCCTGACGTCCTGCTGGCGACGCTGTTCCCGACCCTGCAGGGC TGGCGGGAAAAGTCTTACTGGGATCGTTTACTCAGCGCGATATCGGTCCCCAGCATTTTCCTGCTGGTGATAACG CTGCCCGTCGTGGACATGGAGGCGACCGAAGAAGCCACGATGGAGCGAGATCTCCTGTCCGATGGCCCGAGCTAT GGTGCCATGGAAGGCTCGGCGCCGGCCATTTCCGTGATCCCTGCCGACGCCCAGGCCGAAACCGGCTGGGAAAAT TATCGGTTGTCGCCGGCAGCGGACCCGTCGGCCGAAGCGATGGAAGGCGTCGCATCGAGAGGCTCCGTCATGTCT GCCAAGGCGCCATCGGAGATACGGTCGGCGAGCAAGGGTAGCAAGGAGCCGCCGTCGTGGAACCGATGGCTAGTC TGTGTTCAGCTCTTCAGCGGGCCGCTATTTTCGACGCTGATCCTGTGGGCCAACATGCGGGAGGACATGGGACGA CCGGTGCGGGAGCTGGTGCGGATGGTGGCCTTTTCGTTGTTGCTGTCGGCCTTGCTGCTGGCAGTGGTGCTGATG ACGACGACGGGCCAGAGGCGACCGCGGCTCCACTACCTGCTATGCTTCCTGGGCTTCGTTATCAGCGTCGCGTGG ATATCGACGATCGCGGGCGAAGTGGTCGGGGTGCTCAAGGCCTTTGGCGTCATCCTGGGCATATCGGAGGCGCTG CTGGGACTGACGGTGTTCGCAGCGGGCAACAGCATCGGAGATCTGGTGGCGGACATAACGGTCGCGCGACTGGGG TATCCGGTCATGGCGCTGTCTGCGTGCTTCGGAGGACCCATGCTCAACATCCTGCTGGGCATCGGCATCGGGGGC GTCATGATGATGATGAAGCAGGCCAACAAGGAGCACGGGCAGCATCCGGGGGAGCCGATGCGATACGGCCCGTAC AGGATGCAGATGGGAGCGACGCTGTTCGTGTCGGGGGTGACGCTGCTGCTGATGCTGGTGGTGCTGGTGGTGCTT GTGCCGATGAACAAGTGGATACTGAGCCGTCGGATCGGCTGGCTGGTGATTATGATGTGGGTTGTGAGCACGGCT GTGAGCGTCGTGGTCGAGTTGACGGGTAAGTCGAGCGGGCTGGCGTCCGTCGACGTAGAATGGCTACCCTAG |
| Transcript | >Ophcf2|07146 ATGCTCTCTAACCGCTCCAGACCCCCGTCACGCCCCTTTGTCGTCGCCCTCGTCGCCCTCGCCCTCCTGACGGCC TATTCGTTCCTCAACCGAGGCCCTTCACCCGACCCGTCCTCCTCTTCCCATGATGGGTCTTATCCCGCCCATATC CGCCGTCACCATCATGACGACACGGCCTGTCGCAACATCGACGCCGTCGCCGACAAGTGCGCCTTTGTCAAGCGT CACTGCGCCGACGTCGACGCCAGCCTCATCCCCTATCTCGAGCTCTACTACTGCACCCATCAGAGCGCGAGACCC CTCTCCTTCTCCCTCCTCGTCGCCTGGCTCGGTCTGCTCTTTTCCACCATCGGCATCGCTGCCAGCGACTTCTTC TGCGTCAACCTCGCCACCATCTCCGCCGTCCTCGGCCTGAGCCAGAGCCTCGCCGGCGTCACCTTTCTCGCCCTC GGCAACGGCTCCCCCGATGTCTTCAGCACCTTTGCCGCCATGAGTTCAAACAGCCCCGGCATGGCCATAGGCGAG CTCATCGGCGCTGCCAGCTTCATCGCCGGCGTCGTTGCCGGTTCCATGGCCCTCGTTCGCGAGTTCCGCGTCGAC CGCAAGACGTACGCACGCGATATTTGCTTCTTCATCGTCGCCGTCGCCTTCACCATGGCCTTCCTGGCCGACGGC AACCTTCACATCTGGGAGTGCTGTGTCATGATCGGCTATTACGCGCTCTACGTCATCACCGTCGTCGTCAGTCAC TGGTACGATGTCAGGGCCAGGCGCGAGCTCCGGCGAGACACAGAGTCTCGCAGCCACGTCTATGTCATGGATGGT CACGCTGAGGAGCTGGCGGGCGAGCCCTATCGAGACGACGACCGTTCGCCCTTGCCCGTCACCCCCGTCACTCTC GAAGCCGGCTCGCTCGTTGATGACGACGGCCATCACGAACGGTTGGCAGCGGCCGAGGTGACGAATAATATGCGC GTCGTGCGATCGAGCCATAAGCGGCCTCCGATCACGACTCCCATCCGTCCGAGTCTGGTGGGCGCTCTCGAATTC CGCGCTGCTCTGGCCCAGCTCCAGCGCGAGAGCAACCTGCATCTCTCGCCCCTGCTGGTCCGGGGCCAGTCCCAG TCTCGGCCCCTGCTGCGGCGTGGGACAACGTGCAATGCCCTGTTCGGGGGTAGCGACGACGGCACCGGTGTCTCG ACTCCCGTGCCCAGCCTCGCACGCAGGGATCGCGCCCTGTCGTCGAGCGACATACCGGTCGCTTCCACCGTCGTC CCCGCTGATCTCATGGACGCACGCCTCGGCAGTACGGGGTCTCGGTTTCTGACGCCCGAGGCGGCCCAGCCGGAG CGGACGAATCCGTCGCCAACGCCCTCGTTGCCCGTCATAGCAGTCGAGCCACCCGACGAGACGAATCATGAACCG TCGCGGGAATCCATCCCGAAGCTGAGGCTGGAGATACCGGGCCATTCGAGGAGTCCCAGTGCAACGTCGTCGCCT GAAACGGCTTTCCCCCGCTACGTCGATCCGAGCGCGCTCGGAGACGACGACGTCCAGCCTCCGGCCCCTGTTTCG GTCCGATGGTGGCCGTATCGGGTGCTTCCCCCGCCTGACGTCCTGCTGGCGACGCTGTTCCCGACCCTGCAGGGC TGGCGGGAAAAGTCTTACTGGGATCGTTTACTCAGCGCGATATCGGTCCCCAGCATTTTCCTGCTGGTGATAACG CTGCCCGTCGTGGACATGGAGGCGACCGAAGAAGCCACGATGGAGCGAGATCTCCTGTCCGATGGCCCGAGCTAT GGTGCCATGGAAGGCTCGGCGCCGGCCATTTCCGTGATCCCTGCCGACGCCCAGGCCGAAACCGGCTGGGAAAAT TATCGGTTGTCGCCGGCAGCGGACCCGTCGGCCGAAGCGATGGAAGGCGTCGCATCGAGAGGCTCCGTCATGTCT GCCAAGGCGCCATCGGAGATACGGTCGGCGAGCAAGGGTAGCAAGGAGCCGCCGTCGTGGAACCGATGGCTAGTC TGTGTTCAGCTCTTCAGCGGGCCGCTATTTTCGACGCTGATCCTGTGGGCCAACATGCGGGAGGACATGGGACGA CCGGTGCGGGAGCTGGTGCGGATGGTGGCCTTTTCGTTGTTGCTGTCGGCCTTGCTGCTGGCAGTGGTGCTGATG ACGACGACGGGCCAGAGGCGACCGCGGCTCCACTACCTGCTATGCTTCCTGGGCTTCGTTATCAGCGTCGCGTGG ATATCGACGATCGCGGGCGAAGTGGTCGGGGTGCTCAAGGCCTTTGGCGTCATCCTGGGCATATCGGAGGCGCTG CTGGGACTGACGGTGTTCGCAGCGGGCAACAGCATCGGAGATCTGGTGGCGGACATAACGGTCGCGCGACTGGGG TATCCGGTCATGGCGCTGTCTGCGTGCTTCGGAGGACCCATGCTCAACATCCTGCTGGGCATCGGCATCGGGGGC GTCATGATGATGATGAAGCAGGCCAACAAGGAGCACGGGCAGCATCCGGGGGAGCCGATGCGATACGGCCCGTAC AGGATGCAGATGGGAGCGACGCTGTTCGTGTCGGGGGTGACGCTGCTGCTGATGCTGGTGGTGCTGGTGGTGCTT GTGCCGATGAACAAGTGGATACTGAGCCGTCGGATCGGCTGGCTGGTGATTATGATGTGGGTTGTGAGCACGGCT GTGAGCGTCGTGGTCGAGTTGACGGGTAAGTCGAGCGGGCTGGCGTCCGTCGACGTAGAATGGCTACCCTAG |
| Gene | >Ophcf2|07146 ATGCTCTCTAACCGCTCCAGACCCCCGTCACGCCCCTTTGTCGTCGCCCTCGTCGCCCTCGCCCTCCTGACGGCC TATTCGTTCCTCAACCGAGGCCCTTCACCCGACCCGTCCTCCTCTTCCCATGATGGGTCTTATCCCGCCCATATC CGCCGTCACCATCATGACGACACGGCCTGTCGCAACATCGACGCCGTCGCCGACAAGTGCGCCTTTGTCAAGCGT CACTGCGCCGACGTCGACGCCAGCCTCATCCCCTATCTCGAGCTCTACTACTGCACCCATCAGAGCGCGAGACCC CTCTCCTTCTCCCTCCTCGTCGCCTGGCTCGGTCTGCTCTTTTCCACCATCGGCATCGCTGCCAGCGACTTCTTC TGCGTCAACCTCGCCACCATCTCCGCCGTCCTCGGCCTGAGCCAGAGCCTCGCCGGCGTCACCTTTCTCGCCCTC GGCAACGGCTCCCCCGATGTCTTCAGCACCTTTGCCGCCATGAGTTCAAACAGCCCCGGCATGGCCATAGGCGAG CTCATCGGCGCTGCCAGCTTCATCGCCGGCGTCGTTGCCGGTTCCATGGCCCTCGTTCGCGAGTTCCGCGTCGAC CGCAAGACGTACGCACGCGATATTTGCTTCTTCATCGTCGCCGTCGCCTTCACCATGGCCTTCCTGGCCGACGGC AACCTTCACATCTGGGAGTGCTGTGTCATGATCGGCTATTACGCGCTCTACGTCATCACCGTCGTCGTCAGTCAC TGGTACGATGTCAGGGCCAGGCGCGAGCTCCGGCGAGACACAGAGTCTCGCAGCCACGTCTATGTCATGGATGGT CACGCTGAGGAGCTGGCGGGCGAGCCCTATCGAGACGACGACCGTTCGCCCTTGCCCGTCACCCCCGTCACTCTC GAAGCCGGCTCGCTCGTTGATGACGACGGCCATCACGAACGGTTGGCAGCGGCCGAGGTGACGAATAATATGCGC GTCGTGCGATCGAGCCATAAGCGGCCTCCGATCACGACTCCCATCCGTCCGAGTCTGGTGGGCGCTCTCGAATTC CGCGCTGCTCTGGCCCAGCTCCAGCGCGAGAGCAACCTGCATCTCTCGCCCCTGCTGGTCCGGGGCCAGTCCCAG TCTCGGCCCCTGCTGCGGCGTGGGACAACGTGCAATGCCCTGTTCGGGGGTAGCGACGACGGCACCGGTGTCTCG ACTCCCGTGCCCAGCCTCGCACGCAGGGATCGCGCCCTGTCGTCGAGCGACATACCGGTCGCTTCCACCGTCGTC CCCGCTGATCTCATGGACGCACGCCTCGGCAGTACGGGGTCTCGGTTTCTGACGCCCGAGGCGGCCCAGCCGGAG CGGACGAATCCGTCGCCAACGCCCTCGTTGCCCGTCATAGCAGTCGAGCCACCCGACGAGACGAATCATGAACCG TCGCGGGAATCCATCCCGAAGCTGAGGCTGGAGATACCGGGCCATTCGAGGAGTCCCAGTGCAACGTCGTCGCCT GAAACGGCTTTCCCCCGCTACGTCGATCCGAGCGCGCTCGGAGACGACGACGTCCAGCCTCCGGCCCCTGTTTCG GTCCGATGGTGGCCGTATCGGGTGCTTCCCCCGCCTGACGTCCTGCTGGCGACGCTGTTCCCGACCCTGCAGGGC TGGCGGGAAAAGTCTTACTGGGATCGTTTACTCAGCGCGATATCGGTCCCCAGCATTTTCCTGCTGGTGATAACG CTGCCCGTCGTGGACATGGAGGCGACCGAAGAAGCCACGATGGAGCGAGATCTCCTGTCCGATGGCCCGAGCTAT GGTGCCATGGAAGGCTCGGCGCCGGCCATTTCCGTGATCCCTGCCGACGCCCAGGCCGAAACCGGCTGGGAAAAT TATCGGTTGTCGCCGGCAGCGGACCCGTCGGCCGAAGCGATGGAAGGCGTCGCATCGAGAGGCTCCGTCATGTCT GCCAAGGCGCCATCGGAGATACGGTCGGCGAGCAAGGGTAGCAAGGAGCCGCCGTCGTGGAACCGATGGCTAGTC TGTGTTCAGCTCTTCAGCGGGCCGCTATTTTCGACGCTGATCCTGTGGGCCAACATGCGGGAGGACATGGGACGA CCGGTGCGGGAGCTGGTGCGGATGGTGGCCTTTTCGTTGTTGCTGTCGGCCTTGCTGCTGGCAGTGGTGCTGATG ACGACGACGGGCCAGAGGCGACCGCGGCTCCACTACCTGCTATGCTTCCTGGGCTTCGTTATCAGCGTCGCGTGG ATATCGACGATCGCGGGCGAAGTGGTCGGGGTGCTCAAGGCCTTTGGCGTCATCCTGGGCATATCGGAGGCGCTG CTGGGACTGACGGTGTTCGCAGCGGGCAACAGCATCGGAGATCTGGTGGCGGACATAACGGTCGCGCGACTGGGG TATCCGGTCATGGCGCTGTAAGTCGATGGCGGCCCGCTCGGGGAGAGTTTCCGATGCTGACGGAGTACATACAAG GTCTGCGTGCTTCGGAGGACCCATGCTCAACATCCTGCTGGGCATCGGCATCGGGGGCGTCATGATGATGATGAA GCAGGCCAACAAGGAGCACGGGCAGCATCCGGGGGAGCCGATGCGATACGGCCCGTACAGGATGCAGATGGGAGC GACGCTGTTCGTGTCGGGGGTGACGCTGCTGCTGATGCTGGTGGTGCTGGTGGTGCTTGTGCCGATGAACAAGTG GATACTGAGCCGTCGGATCGGCTGGCTGGTGATTATGATGTGGGTTGTGAGCACGGCTGTGAGCGTCGTGGTCGA GTTGACGGGTAAGTCGAGCGGGCTGGCGTCCGTCGACGTAGAATGGCTACCCTAG |