Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07120
Gene name
Locationscaffold_09:661403..661886
Strand-
Gene length (bp)483
Transcript length (bp)429
Coding sequence length (bp)429
Protein length (aa) 143

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10190 Tmemb_170 Putative transmembrane protein 170 5.0E-26 35 137

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 44 66 22
2 79 101 22
3 116 138 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07120
MSYPNDPPPGYETPDWPGLGLPILGDHTPDKRHTLYTVGASWRFTLLWTLVTYAVVHVAVVFIAFCTHGWKRASW
KYTWALPIIYLIVAGIEAVFAGSVTGLMVGAIYRAGYHEMNTWVPLVWGFINVLVLIVSSFSFSGGL*
Coding >Ophcf2|07120
ATGTCGTACCCGAATGATCCGCCGCCGGGCTACGAGACGCCAGACTGGCCAGGCCTGGGCCTCCCCATCCTTGGC
GACCATACGCCAGATAAGCGGCACACGCTCTACACCGTCGGCGCCTCATGGCGCTTCACGCTGCTGTGGACGCTC
GTCACCTACGCCGTCGTCCATGTCGCCGTCGTCTTCATCGCCTTCTGCACGCACGGATGGAAGCGGGCGTCGTGG
AAATACACCTGGGCGCTACCCATAATATACCTCATCGTCGCCGGCATCGAAGCCGTCTTTGCCGGCAGCGTCACA
GGTCTGATGGTGGGGGCTATCTATAGGGCGGGCTATCATGAGATGAACACTTGGGTTCCCCTCGTCTGGGGTTTC
ATCAATGTTCTCGTCCTCATCGTCTCTTCCTTTTCCTTTTCAGGAGGGTTATGA
Transcript >Ophcf2|07120
ATGTCGTACCCGAATGATCCGCCGCCGGGCTACGAGACGCCAGACTGGCCAGGCCTGGGCCTCCCCATCCTTGGC
GACCATACGCCAGATAAGCGGCACACGCTCTACACCGTCGGCGCCTCATGGCGCTTCACGCTGCTGTGGACGCTC
GTCACCTACGCCGTCGTCCATGTCGCCGTCGTCTTCATCGCCTTCTGCACGCACGGATGGAAGCGGGCGTCGTGG
AAATACACCTGGGCGCTACCCATAATATACCTCATCGTCGCCGGCATCGAAGCCGTCTTTGCCGGCAGCGTCACA
GGTCTGATGGTGGGGGCTATCTATAGGGCGGGCTATCATGAGATGAACACTTGGGTTCCCCTCGTCTGGGGTTTC
ATCAATGTTCTCGTCCTCATCGTCTCTTCCTTTTCCTTTTCAGGAGGGTTATGA
Gene >Ophcf2|07120
ATGTCGTACCCGAATGATCCGCCGCCGGGCTACGAGACGCCAGACTGGCCAGGCCTGGGCCTCCCCATCCTTGGC
GACCATACGCCAGATAAGCGGCACACGCTCTACACCGTCGGCGCCTCATGGCGCTTCACGCTGCTGTGGACGCTC
GTCACCTACGCCGTCGTCCATGTCGCCGTCGTCTTCATCGCCTTCTGCACGCACGGATGGAAGCGGGCGTCGTGG
AAATACACCTGGGCGCTACCCATAATATACCTCATCGTCGCCGGCATCGAAGCCGTCTTTGCCGGCAGCGTCACA
GGTCTGATGTAGGTGCATGATTTGGCATCCTAGGTCTGGCCTGGCTGACGATGGCGGCGCAGGGTGGGGGCTATC
TATAGGGCGGGCTATCATGAGATGAACACTTGGGTTCCCCTCGTCTGGGGTTTCATCAATGTTCTCGTCCTCATC
GTCTCTTCCTTTTCCTTTTCAGGAGGGTTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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