© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|07119 |
| Gene name | |
| Location | scaffold_09:660067..660841 |
| Strand | - |
| Gene length (bp) | 774 |
| Transcript length (bp) | 774 |
| Coding sequence length (bp) | 774 |
| Protein length (aa) | 258 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04140 | ICMT | Isoprenylcysteine carboxyl methyltransferase (ICMT) family | 2.5E-28 | 143 | 235 |
| PF04191 | PEMT | Phospholipid methyltransferase | 4.1E-11 | 139 | 239 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004671 | protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0006481 | C-terminal protein methylation | Yes |
| GO:0010340 | carboxyl-O-methyltransferase activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0016740 | transferase activity | No |
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | No |
| GO:0051998 | protein carboxyl O-methyltransferase activity | No |
| GO:0043414 | macromolecule methylation | No |
| GO:0032259 | methylation | No |
| GO:0008152 | metabolic process | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0003880 | protein C-terminal carboxyl O-methyltransferase activity | No |
| GO:0036211 | protein modification process | No |
| GO:0009987 | cellular process | No |
| GO:0008168 | methyltransferase activity | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0006479 | protein methylation | No |
| GO:0008276 | protein methyltransferase activity | No |
| GO:0008171 | O-methyltransferase activity | No |
| GO:0043412 | macromolecule modification | No |
| GO:0008213 | protein alkylation | No |
| GO:0003674 | molecular_function | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0044238 | primary metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0018410 | C-terminal protein amino acid modification | No |
| GO:0043687 | post-translational protein modification | No |
| GO:0003824 | catalytic activity | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 34 | 56 | 22 |
| 2 | 63 | 85 | 22 |
| 3 | 100 | 122 | 22 |
| 4 | 129 | 151 | 22 |
| 5 | 201 | 223 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|07119 MDNHAPSSLQHLRRPSEDALKPFYPGQPSSLSGIALRAFSLGLTFAAGALLTISILFLTESPLWRVPFFLVPLSA FHFLEFWTTAEANTLRADIDSFLLTANWPAYAIAHAAAFLEAALVGFIFPHRQWAPFQSGPLLVVLGLLLIILGQ AVRSCAMLQAGASFNHRVQTKKAGSHVLVTSGVYALLRHPSYFGFFYWGLGTQLVLGNVVCFAIYAIVLWNFFRS RIVIEESKLVEFFQDDYVNYRKSVPTMLPFIP* |
| Coding | >Ophcf2|07119 ATGGACAACCACGCGCCCTCCTCTCTACAGCATCTCCGTCGCCCCTCGGAAGACGCCCTCAAACCCTTCTACCCC GGTCAGCCAAGCTCCCTCTCCGGCATCGCCCTCCGCGCCTTCAGCCTCGGCCTCACCTTCGCCGCTGGCGCTCTC CTCACCATCTCCATCCTCTTCCTAACCGAAAGCCCTCTCTGGCGCGTCCCCTTCTTCCTCGTCCCCCTCTCAGCA TTCCACTTCCTCGAATTCTGGACCACGGCCGAGGCAAACACCCTCCGCGCCGACATCGACAGCTTCCTCCTGACT GCCAACTGGCCGGCATACGCCATCGCCCATGCCGCAGCCTTCCTAGAGGCTGCCCTGGTCGGCTTCATCTTCCCC CACCGCCAATGGGCCCCCTTTCAATCGGGTCCCCTCCTCGTCGTGCTGGGCCTTCTTCTCATCATTCTCGGACAG GCTGTCCGCTCTTGTGCCATGCTTCAGGCCGGCGCGAGCTTTAATCACCGCGTACAGACGAAGAAAGCTGGTTCG CACGTGCTCGTCACCTCGGGCGTTTATGCCCTCCTGCGCCATCCCAGCTATTTCGGCTTCTTTTACTGGGGTTTG GGGACTCAGCTTGTACTCGGCAACGTCGTCTGCTTCGCCATCTACGCCATTGTGCTTTGGAACTTCTTCAGGTCC CGCATCGTCATTGAAGAGTCCAAGCTCGTTGAATTCTTTCAAGACGACTATGTCAATTACCGGAAAAGCGTCCCT ACCATGCTGCCCTTCATACCATGA |
| Transcript | >Ophcf2|07119 ATGGACAACCACGCGCCCTCCTCTCTACAGCATCTCCGTCGCCCCTCGGAAGACGCCCTCAAACCCTTCTACCCC GGTCAGCCAAGCTCCCTCTCCGGCATCGCCCTCCGCGCCTTCAGCCTCGGCCTCACCTTCGCCGCTGGCGCTCTC CTCACCATCTCCATCCTCTTCCTAACCGAAAGCCCTCTCTGGCGCGTCCCCTTCTTCCTCGTCCCCCTCTCAGCA TTCCACTTCCTCGAATTCTGGACCACGGCCGAGGCAAACACCCTCCGCGCCGACATCGACAGCTTCCTCCTGACT GCCAACTGGCCGGCATACGCCATCGCCCATGCCGCAGCCTTCCTAGAGGCTGCCCTGGTCGGCTTCATCTTCCCC CACCGCCAATGGGCCCCCTTTCAATCGGGTCCCCTCCTCGTCGTGCTGGGCCTTCTTCTCATCATTCTCGGACAG GCTGTCCGCTCTTGTGCCATGCTTCAGGCCGGCGCGAGCTTTAATCACCGCGTACAGACGAAGAAAGCTGGTTCG CACGTGCTCGTCACCTCGGGCGTTTATGCCCTCCTGCGCCATCCCAGCTATTTCGGCTTCTTTTACTGGGGTTTG GGGACTCAGCTTGTACTCGGCAACGTCGTCTGCTTCGCCATCTACGCCATTGTGCTTTGGAACTTCTTCAGGTCC CGCATCGTCATTGAAGAGTCCAAGCTCGTTGAATTCTTTCAAGACGACTATGTCAATTACCGGAAAAGCGTCCCT ACCATGCTGCCCTTCATACCATGA |
| Gene | >Ophcf2|07119 ATGGACAACCACGCGCCCTCCTCTCTACAGCATCTCCGTCGCCCCTCGGAAGACGCCCTCAAACCCTTCTACCCC GGTCAGCCAAGCTCCCTCTCCGGCATCGCCCTCCGCGCCTTCAGCCTCGGCCTCACCTTCGCCGCTGGCGCTCTC CTCACCATCTCCATCCTCTTCCTAACCGAAAGCCCTCTCTGGCGCGTCCCCTTCTTCCTCGTCCCCCTCTCAGCA TTCCACTTCCTCGAATTCTGGACCACGGCCGAGGCAAACACCCTCCGCGCCGACATCGACAGCTTCCTCCTGACT GCCAACTGGCCGGCATACGCCATCGCCCATGCCGCAGCCTTCCTAGAGGCTGCCCTGGTCGGCTTCATCTTCCCC CACCGCCAATGGGCCCCCTTTCAATCGGGTCCCCTCCTCGTCGTGCTGGGCCTTCTTCTCATCATTCTCGGACAG GCTGTCCGCTCTTGTGCCATGCTTCAGGCCGGCGCGAGCTTTAATCACCGCGTACAGACGAAGAAAGCTGGTTCG CACGTGCTCGTCACCTCGGGCGTTTATGCCCTCCTGCGCCATCCCAGCTATTTCGGCTTCTTTTACTGGGGTTTG GGGACTCAGCTTGTACTCGGCAACGTCGTCTGCTTCGCCATCTACGCCATTGTGCTTTGGAACTTCTTCAGGTCC CGCATCGTCATTGAAGAGTCCAAGCTCGTTGAATTCTTTCAAGACGACTATGTCAATTACCGGAAAAGCGTCCCT ACCATGCTGCCCTTCATACCATGA |