Protein ID | Ophcf2|07108 |
Gene name | |
Location | scaffold_09:635288..637727 |
Strand | - |
Gene length (bp) | 2439 |
Transcript length (bp) | 2271 |
Coding sequence length (bp) | 2271 |
Protein length (aa) | 757 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00226 | DnaJ | DnaJ domain | 5.8E-26 | 531 | 593 |
PF13432 | TPR_16 | Tetratricopeptide repeat | 4.9E-07 | 179 | 241 |
PF13432 | TPR_16 | Tetratricopeptide repeat | 3.2E-04 | 344 | 392 |
PF13432 | TPR_16 | Tetratricopeptide repeat | 2.7E-03 | 411 | 473 |
PF14559 | TPR_19 | Tetratricopeptide repeat | 3.6E-06 | 220 | 268 |
PF13414 | TPR_11 | TPR repeat | 1.0E-07 | 181 | 222 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 4.4E-03 | 243 | 267 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 3.0E-03 | 443 | 474 |
PF13174 | TPR_6 | Tetratricopeptide repeat | 1.6E-01 | 245 | 268 |
PF07721 | TPR_4 | Tetratricopeptide repeat | 3.6E-01 | 246 | 267 |
PF07721 | TPR_4 | Tetratricopeptide repeat | 9.3E-01 | 359 | 383 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0042802 | identical protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 37 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 722 | 744 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|07108 MKFFGGKKPSSSSKKNAIDERSRDHRHSHSEPSSPLKASSSRSAKKASSRPSSHYRDSARLSRHSSDLPSSSSAR RANYHLDTHPLNLPPEERKRLSDLSNSVMSGRASMDIDPEPSSSPSPTATPNNNGPSAQANFAVPIPNGSGSADD EAPPAPPPHKSNPSSPVPTPRDDAESYKAAGNRFFKDKNYAKAIEQYSKAVDLFPDSPTYLGNRAAAYMSNGQYE AALQDCLDATEHDADNEKMLLRLGRIYTALGRPEEAMATFERINSPTSAKDMAPTKAMLRHVESAKAALSRGSAA TMVLHALEQAERGLGPGVAKPRKWQLMRGEACLGIGHENSLGEAQNIAMSLLRRNNQDPEALVLRGRVLYAQGEN EKAVQSLRMAVTCDPDYNDAIKWLKKVQKLDRMKEEGNADFNAGRHQSAAEKYTAALAIDPTNRSMKAKLLHNRA QCRIKLKQYDEAIADADEAVSLDSGYTKARKTKANALGQMGRWEDCVREWKSIQELDPSDRTVPPKIRTAQLELK KSQRKDYYKIMEVERDAGPDEIKKAYRKLAVRLHPDKNPGDEEAEAKFKDLQEAYETLSDPQKKAAYDNGDDLVD PSDMFGGGGMGGGMGGMGGMGGMPIDPEILLNMMGGGARFGGGGGGGRGPFPPVDSPGGAGGFPAGSTFSFGGAA EDDDDDDDEKDDESEVDDEEWPLIGRVPDDTGEVARRYGMVLLTLSVLLPLPLVAAGVIVVVSVRVCWALLVGRR PLKMEP* |
Coding | >Ophcf2|07108 ATGAAGTTCTTTGGCGGCAAGAAACCATCATCGTCCTCCAAGAAAAACGCCATCGACGAGCGCAGCAGGGATCAT CGACACTCTCATTCAGAGCCGTCGTCTCCCCTTAAAGCGTCATCGTCCAGATCGGCCAAGAAGGCCTCATCTAGG CCCTCGTCCCATTACCGCGATTCAGCAAGACTATCACGTCACTCGTCCGATCTGCCCTCGTCGTCATCGGCGCGG CGCGCCAACTATCATCTCGACACTCATCCGCTCAATCTACCGCCTGAAGAGCGGAAGCGTCTCTCGGATCTCTCC AACAGCGTCATGAGCGGTCGCGCCTCGATGGATATCGACCCGGAGCCGTCCTCGTCGCCTTCTCCGACTGCGACT CCGAACAATAATGGTCCTTCTGCCCAAGCAAACTTTGCGGTGCCCATCCCCAACGGCTCCGGCTCAGCCGATGAC GAGGCACCTCCCGCACCGCCTCCGCACAAGTCTAACCCTTCCAGCCCCGTGCCGACGCCCCGTGACGATGCCGAG TCTTACAAGGCGGCGGGCAACCGCTTCTTCAAGGACAAGAACTATGCCAAGGCTATCGAGCAGTATTCCAAGGCC GTCGACCTGTTCCCCGATTCCCCGACATACCTGGGCAATCGTGCGGCCGCCTACATGTCCAACGGCCAGTACGAG GCGGCGCTGCAGGACTGCCTCGACGCTACCGAGCACGACGCCGACAACGAAAAGATGCTACTGCGGCTCGGACGA ATCTATACTGCTCTGGGACGGCCGGAGGAGGCCATGGCCACGTTCGAACGTATCAACTCACCGACGTCAGCAAAG GACATGGCGCCTACAAAGGCCATGCTGCGACATGTCGAATCGGCCAAGGCAGCACTGAGCCGAGGCTCGGCCGCC ACCATGGTGCTCCACGCCCTGGAACAGGCAGAGCGGGGGCTCGGTCCGGGCGTGGCCAAGCCTCGCAAGTGGCAG CTGATGCGTGGAGAGGCTTGCCTTGGCATCGGACATGAAAACTCGCTCGGTGAGGCTCAGAACATCGCCATGTCG CTACTGAGACGGAACAATCAGGATCCGGAGGCCCTGGTCCTTCGCGGTCGCGTGCTCTACGCCCAAGGTGAAAAC GAAAAGGCAGTCCAGTCGCTGCGGATGGCGGTGACGTGCGATCCCGACTATAACGATGCCATCAAGTGGCTGAAG AAGGTACAGAAGCTCGATCGGATGAAGGAAGAGGGTAACGCAGACTTCAATGCCGGTCGTCATCAGTCGGCGGCC GAGAAATACACGGCGGCCCTCGCCATCGACCCGACGAACCGAAGCATGAAGGCCAAGCTGCTGCACAATCGGGCC CAGTGCCGTATCAAGCTGAAGCAGTACGACGAAGCCATCGCCGACGCCGATGAGGCCGTCAGCCTCGACTCGGGC TACACCAAGGCTCGCAAGACCAAGGCCAACGCGCTGGGTCAGATGGGCCGATGGGAGGACTGCGTACGCGAGTGG AAGTCGATCCAGGAGCTCGACCCAAGCGATCGCACGGTGCCGCCCAAGATTCGGACTGCCCAGCTGGAGCTCAAG AAGAGTCAGCGAAAGGATTACTACAAGATCATGGAGGTGGAAAGGGACGCCGGTCCCGACGAGATCAAGAAGGCC TACCGAAAGCTGGCCGTCAGGCTGCATCCGGACAAGAACCCGGGCGACGAGGAGGCCGAGGCCAAGTTCAAGGAC CTGCAGGAAGCCTACGAGACGCTAAGTGACCCTCAGAAAAAGGCGGCCTACGACAACGGCGACGACCTCGTGGAC CCTTCCGACATGTTTGGCGGAGGCGGAATGGGCGGCGGAATGGGCGGAATGGGCGGCATGGGCGGCATGCCCATC GACCCGGAGATCCTCCTCAACATGATGGGAGGCGGAGCGCGATTCGGAGGCGGCGGAGGCGGAGGTCGGGGCCCC TTTCCGCCGGTGGATTCCCCGGGCGGTGCCGGCGGTTTCCCCGCCGGTTCGACGTTTAGTTTCGGCGGTGCCGCC GAAGACGACGACGACGATGATGATGAGAAGGACGACGAGAGCGAAGTCGATGACGAAGAGTGGCCACTCATTGGT CGCGTGCCGGACGATACGGGGGAAGTGGCCCGTCGGTATGGCATGGTGCTGCTGACGCTTTCGGTGCTTCTACCG CTTCCGCTGGTGGCCGCCGGCGTTATCGTCGTTGTCTCGGTTCGCGTCTGTTGGGCCCTGTTGGTCGGACGACGG CCGTTGAAGATGGAGCCGTGA |
Transcript | >Ophcf2|07108 ATGAAGTTCTTTGGCGGCAAGAAACCATCATCGTCCTCCAAGAAAAACGCCATCGACGAGCGCAGCAGGGATCAT CGACACTCTCATTCAGAGCCGTCGTCTCCCCTTAAAGCGTCATCGTCCAGATCGGCCAAGAAGGCCTCATCTAGG CCCTCGTCCCATTACCGCGATTCAGCAAGACTATCACGTCACTCGTCCGATCTGCCCTCGTCGTCATCGGCGCGG CGCGCCAACTATCATCTCGACACTCATCCGCTCAATCTACCGCCTGAAGAGCGGAAGCGTCTCTCGGATCTCTCC AACAGCGTCATGAGCGGTCGCGCCTCGATGGATATCGACCCGGAGCCGTCCTCGTCGCCTTCTCCGACTGCGACT CCGAACAATAATGGTCCTTCTGCCCAAGCAAACTTTGCGGTGCCCATCCCCAACGGCTCCGGCTCAGCCGATGAC GAGGCACCTCCCGCACCGCCTCCGCACAAGTCTAACCCTTCCAGCCCCGTGCCGACGCCCCGTGACGATGCCGAG TCTTACAAGGCGGCGGGCAACCGCTTCTTCAAGGACAAGAACTATGCCAAGGCTATCGAGCAGTATTCCAAGGCC GTCGACCTGTTCCCCGATTCCCCGACATACCTGGGCAATCGTGCGGCCGCCTACATGTCCAACGGCCAGTACGAG GCGGCGCTGCAGGACTGCCTCGACGCTACCGAGCACGACGCCGACAACGAAAAGATGCTACTGCGGCTCGGACGA ATCTATACTGCTCTGGGACGGCCGGAGGAGGCCATGGCCACGTTCGAACGTATCAACTCACCGACGTCAGCAAAG GACATGGCGCCTACAAAGGCCATGCTGCGACATGTCGAATCGGCCAAGGCAGCACTGAGCCGAGGCTCGGCCGCC ACCATGGTGCTCCACGCCCTGGAACAGGCAGAGCGGGGGCTCGGTCCGGGCGTGGCCAAGCCTCGCAAGTGGCAG CTGATGCGTGGAGAGGCTTGCCTTGGCATCGGACATGAAAACTCGCTCGGTGAGGCTCAGAACATCGCCATGTCG CTACTGAGACGGAACAATCAGGATCCGGAGGCCCTGGTCCTTCGCGGTCGCGTGCTCTACGCCCAAGGTGAAAAC GAAAAGGCAGTCCAGTCGCTGCGGATGGCGGTGACGTGCGATCCCGACTATAACGATGCCATCAAGTGGCTGAAG AAGGTACAGAAGCTCGATCGGATGAAGGAAGAGGGTAACGCAGACTTCAATGCCGGTCGTCATCAGTCGGCGGCC GAGAAATACACGGCGGCCCTCGCCATCGACCCGACGAACCGAAGCATGAAGGCCAAGCTGCTGCACAATCGGGCC CAGTGCCGTATCAAGCTGAAGCAGTACGACGAAGCCATCGCCGACGCCGATGAGGCCGTCAGCCTCGACTCGGGC TACACCAAGGCTCGCAAGACCAAGGCCAACGCGCTGGGTCAGATGGGCCGATGGGAGGACTGCGTACGCGAGTGG AAGTCGATCCAGGAGCTCGACCCAAGCGATCGCACGGTGCCGCCCAAGATTCGGACTGCCCAGCTGGAGCTCAAG AAGAGTCAGCGAAAGGATTACTACAAGATCATGGAGGTGGAAAGGGACGCCGGTCCCGACGAGATCAAGAAGGCC TACCGAAAGCTGGCCGTCAGGCTGCATCCGGACAAGAACCCGGGCGACGAGGAGGCCGAGGCCAAGTTCAAGGAC CTGCAGGAAGCCTACGAGACGCTAAGTGACCCTCAGAAAAAGGCGGCCTACGACAACGGCGACGACCTCGTGGAC CCTTCCGACATGTTTGGCGGAGGCGGAATGGGCGGCGGAATGGGCGGAATGGGCGGCATGGGCGGCATGCCCATC GACCCGGAGATCCTCCTCAACATGATGGGAGGCGGAGCGCGATTCGGAGGCGGCGGAGGCGGAGGTCGGGGCCCC TTTCCGCCGGTGGATTCCCCGGGCGGTGCCGGCGGTTTCCCCGCCGGTTCGACGTTTAGTTTCGGCGGTGCCGCC GAAGACGACGACGACGATGATGATGAGAAGGACGACGAGAGCGAAGTCGATGACGAAGAGTGGCCACTCATTGGT CGCGTGCCGGACGATACGGGGGAAGTGGCCCGTCGGTATGGCATGGTGCTGCTGACGCTTTCGGTGCTTCTACCG CTTCCGCTGGTGGCCGCCGGCGTTATCGTCGTTGTCTCGGTTCGCGTCTGTTGGGCCCTGTTGGTCGGACGACGG CCGTTGAAGATGGAGCCGTGA |
Gene | >Ophcf2|07108 ATGAAGTTCTTTGGCGGCAAGAAACCATCATCGTCCTCCAAGAAAAACGCCATCGACGAGCGCAGCAGGGATCAT CGACACTCTCATTCAGAGCCGTCGTCTCCCCTTAAAGCGTCATCGTCCAGATCGGCCAAGAAGGCCTCATCTAGG CCCTCGTCCCATTACCGCGATTCAGCAAGACTATCACGTCACTCGTCCGATCTGCCCTCGTCGTCATCGGCGCGG CGCGCCAACTATCATCTCGACACTCATCCGCTCAATCTACCGCCTGAAGAGCGGAAGCGTCTCTCGGATCTCTCC AACAGCGTCATGAGCGGTCGCGCCTCGATGGATATCGACCCGGAGCCGTCCTCGTCGCCTTCTCCGACTGCGACT CCGAACAATAATGGTCCTTCTGCCCAAGCAAACTTTGCGGTGCCCATCCCCAACGGCTCCGGCTCAGCCGATGAC GAGGCACCTCCCGCACCGCCTCCGCACAAGTCTAACCCTTCCAGCCCCGTGCCGACGCCCCGTGACGATGCCGAG TCTTACAAGGCGGCGGGCAACCGCTTCTTCAAGGACAAGAACTATGCCAAGGCTATCGAGCAGTATTCCAAGGGT AAGGGTCGATCCGGAGTCTTGGCGTTGCATTGTTTGCTGATTGCCCTCCCTGTTCTCATAGCCGTCGACCTGTTC CCCGATTCCCCGACATACCTGGGCAATCGTGCGGCCGCCTACATGTCCAACGGCCAGTACGAGGCGGCGCTGCAG GACTGCCTCGACGCTACCGAGCACGACGCCGACAACGAAAAGATGCTACTGCGGCTCGGACGAATCTATACTGCT CTGGGACGGCCGGAGGAGGCCATGGCCACGTTCGAACGTATCAACTCACCGACGTCAGCAAAGGACATGGCGCCT ACAAAGGCCATGCTGCGACATGTCGAATCGGCCAAGGCAGCACTGAGCCGAGGCTCGGCCGCCACCATGGTGCTC CACGCCCTGGAACAGGCAGAGCGGGGGCTCGGTCCGGGCGTGGCCAAGCCTCGCAAGTGGCAGCTGATGCGTGGA GAGGCTTGCCTTGGCATCGGACATGAAAACTCGCTCGGTGAGGCTCAGAACATCGCCATGTCGCTACTGAGACGG AACAATCAGGATCCGGAGGCCCTGGTCCTTCGCGGTCGCGTGCTCTACGCCCAAGGTGAAAACGAAAAGGCAGTC CAGTCGCTGCGGATGGCGGTGACGTGCGATCCCGACTATAACGATGCCATCAAGTGGCTGAAGAAGGTACAGAAG CTCGATCGGATGAAGGAAGAGGGTAACGCAGACTTCAATGCCGGTCGTCATCAGTCGGCGGCCGAGAAATACACG GCGGCCCTCGCCATCGACCCGACGAACCGAAGCATGAAGGCCAAGCTGCTGCACAATCGGGCCCAGTGCCGTATC AAGCTGAAGCAGTACGACGAAGCCATCGCCGACGCCGATGAGGCCGTCAGCCTCGACTCGGGCTACACCAAGGCT CGCAAGACCAAGGCCAACGCGCTGGGTCAGATGGGCCGATGGGAGGACTGCGTACGCGAGTGGAAGTCGATCCAG GAGCTCGACCCAAGCGATCGCACGGTGCCGCCCAAGATTCGGACTGCCCAGCTGGAGCTCAAGAAGAGTCAGCGA AAGGATTACTACAAGATCATGGAGGTGGAAAGGGACGCCGGTCCCGACGAGATCAAGAAGGCCTACCGAAAGCTG GCCGTCAGGCTGCATCCGGACAAGAACCCGGGCGACGAGGAGGCCGAGGCCAAGTTCAAGGACCTGCAGGAAGCC TACGAGACGCTAAGTGACCCTCAGTATGTCTTTTAGACGGTAGGCTGAGGAGATGACGTTGCTGACGCGTAGGGC AGGAAAAAGGCGGCCTACGACAACGGCGACGACCTCGTGGACCCTTCCGACATGTTTGGCGGAGGCGGAATGGGC GGCGGAATGGGCGGAATGGGCGGCATGGGCGGCATGCCCATCGACCCGGAGATCCTCCTCAACATGATGGGAGGC GGAGCGCGATTCGGAGGCGGCGGAGGCGGAGGTCGGGGCCCCTTTCCGCCGGTGGATTCCCCGGGCGGTGCCGGC GGTTTCCCCGCCGGTTCGACGTTTAGTTTCGGCGGTGCCGGTGCCGGGGGCGGTCGTCAACGAGGCGGCAACCCT TACTTTCAATGACCAGCCGAAGACGACGACGACGATGATGATGAGAAGGACGACGAGAGCGAAGTCGATGACGAA GAGTGGCCACTCATTGGTCGCGTGCCGGACGATACGGGGGAAGTGGCCCGTCGGTATGGCATGGTGCTGCTGACG CTTTCGGTGCTTCTACCGCTTCCGCTGGTGGCCGCCGGCGTTATCGTCGTTGTCTCGGTTCGCGTCTGTTGGGCC CTGTTGGTCGGACGACGGCCGTTGAAGATGGAGCCGTGA |