© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|07104 |
| Gene name | |
| Location | scaffold_09:624205..626108 |
| Strand | + |
| Gene length (bp) | 1903 |
| Transcript length (bp) | 1779 |
| Coding sequence length (bp) | 1779 |
| Protein length (aa) | 593 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.9E-10 | 29 | 143 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 8.9E-09 | 202 | 472 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 24 | 46 | 22 |
| 2 | 59 | 81 | 22 |
| 3 | 86 | 108 | 22 |
| 4 | 115 | 137 | 22 |
| 5 | 201 | 223 | 22 |
| 6 | 333 | 355 | 22 |
| 7 | 381 | 403 | 22 |
| 8 | 410 | 432 | 22 |
| 9 | 447 | 469 | 22 |
| 10 | 534 | 556 | 22 |
| 11 | 566 | 583 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|07104 MMSSISRFLPFSASVTTAQATTYLLGVSLFSISFLVFLNSSVSFVITDLIGQKDNVGDVVGTLGFADELVALVAC PAWGLVSDRLGVRWVATIGYAIIGLALAVFVQARNVYPQLLLARLFFAVGASASATMVTAILPSLTDEADPVTAA SGPSRSKHHSRLSAAFSVESEATITPERYTRTLSQERTRGPTSAAKPGKPSALAGFVGSFTGCGALVSLALFLPL PARFGRIDGVTPGQAVEYSFYVVGAVSLAVASFVSIGLRNLRGEEGKGWKALFGMRSRYDALDRLEQDDACRRPR PKRDVLPYLGLMRDSVWLGLTDSRIAMGYIGGFVARASTVAISLFIPLLVNTFFIDNGFCHGSPNDPSPELKKEC RAAYVLSSILTGVAQLMGLVCAPLFGYLSGRTRRVNYPVVAASSLGIIGYMTLPHLSSPEVTDVDGRGGTPAILV VVAAVGVSQIGAIVCSLGSLGQGVLEAELPPSAIGDQASMTAVDEAETEAEAEDEDDGAVESDPLVSAPAESEPS SRVRLKGSIAGIYSLCGGAAILILTKVGGLLFDRLSHGAPFYMMAGFNAIWLVASLLLDASQAYAAS* |
| Coding | >Ophcf2|07104 ATGATGTCGTCCATCTCGCGATTCCTGCCCTTCTCGGCGTCGGTGACTACGGCCCAGGCCACGACGTATCTGCTG GGCGTCTCGCTCTTCTCCATCTCCTTTCTCGTCTTCCTGAACAGCTCTGTTTCGTTTGTGATTACCGACCTGATC GGCCAAAAGGACAACGTCGGCGATGTCGTCGGAACCCTGGGCTTCGCCGACGAGCTGGTAGCCCTGGTGGCCTGT CCGGCTTGGGGACTCGTTTCGGACCGGCTGGGCGTGCGGTGGGTGGCAACCATCGGCTACGCTATCATCGGTCTC GCGTTGGCCGTCTTCGTTCAGGCCCGAAATGTGTATCCTCAGCTACTGCTCGCCCGTCTGTTCTTCGCAGTCGGC GCCTCGGCATCCGCCACCATGGTCACCGCCATACTCCCCTCGTTGACGGACGAGGCTGATCCCGTGACGGCCGCC TCGGGGCCCTCACGCTCCAAGCACCACTCCCGACTCAGCGCCGCCTTTTCCGTCGAGTCCGAAGCCACCATCACA CCCGAGAGGTACACCAGAACGCTGTCACAGGAGCGGACGAGGGGCCCGACGTCGGCGGCCAAGCCCGGGAAGCCG TCGGCGCTGGCCGGTTTCGTCGGCTCCTTTACGGGCTGCGGCGCTCTCGTCTCGCTGGCTCTGTTCCTGCCGCTG CCGGCGAGGTTTGGCCGGATCGACGGTGTCACGCCCGGGCAAGCCGTCGAGTACAGCTTCTACGTGGTGGGGGCC GTGTCTCTGGCCGTCGCCTCGTTCGTCTCCATCGGATTGCGCAACCTGAGGGGCGAAGAAGGGAAAGGCTGGAAA GCGCTGTTCGGCATGCGCAGTCGATACGATGCTCTCGACCGGCTCGAGCAGGACGACGCGTGCAGGAGACCGAGA CCGAAGAGGGACGTGCTCCCCTACCTTGGCTTGATGAGGGACTCGGTGTGGCTAGGCTTGACGGATTCGAGGATA GCCATGGGCTATATCGGCGGATTCGTTGCGAGGGCGTCTACCGTGGCCATCTCCCTCTTCATCCCGCTGCTGGTC AACACCTTCTTCATCGACAACGGCTTCTGCCACGGCTCGCCTAACGATCCGTCACCCGAGCTGAAGAAAGAATGC CGGGCGGCCTACGTGCTGTCGTCGATCCTGACGGGAGTCGCTCAGCTGATGGGTCTCGTGTGCGCGCCCCTGTTC GGCTATCTGTCGGGGCGGACCAGACGGGTCAACTATCCCGTGGTGGCGGCCAGCTCGCTAGGCATCATCGGATAC ATGACGCTGCCTCACCTGTCGAGCCCCGAGGTGACGGATGTGGACGGACGGGGCGGCACACCGGCCATCCTGGTC GTCGTCGCGGCTGTGGGCGTCAGCCAGATCGGGGCTATCGTCTGCAGCCTGGGATCACTGGGCCAGGGCGTCCTG GAGGCGGAGCTGCCGCCATCAGCTATCGGCGACCAGGCGTCGATGACGGCTGTAGATGAGGCTGAAACCGAGGCC GAGGCCGAGGACGAGGACGACGGGGCCGTCGAGTCGGATCCGCTCGTATCCGCGCCGGCCGAAAGCGAGCCGTCG TCTAGGGTGCGGCTCAAGGGATCCATTGCCGGCATCTACTCGCTCTGCGGGGGCGCGGCCATCCTGATCCTCACC AAGGTTGGAGGCTTGCTGTTTGACCGGTTGTCGCACGGGGCGCCGTTTTACATGATGGCCGGCTTCAACGCCATC TGGCTCGTGGCCAGCCTGCTGCTGGACGCCTCTCAGGCTTATGCAGCCAGCTGA |
| Transcript | >Ophcf2|07104 ATGATGTCGTCCATCTCGCGATTCCTGCCCTTCTCGGCGTCGGTGACTACGGCCCAGGCCACGACGTATCTGCTG GGCGTCTCGCTCTTCTCCATCTCCTTTCTCGTCTTCCTGAACAGCTCTGTTTCGTTTGTGATTACCGACCTGATC GGCCAAAAGGACAACGTCGGCGATGTCGTCGGAACCCTGGGCTTCGCCGACGAGCTGGTAGCCCTGGTGGCCTGT CCGGCTTGGGGACTCGTTTCGGACCGGCTGGGCGTGCGGTGGGTGGCAACCATCGGCTACGCTATCATCGGTCTC GCGTTGGCCGTCTTCGTTCAGGCCCGAAATGTGTATCCTCAGCTACTGCTCGCCCGTCTGTTCTTCGCAGTCGGC GCCTCGGCATCCGCCACCATGGTCACCGCCATACTCCCCTCGTTGACGGACGAGGCTGATCCCGTGACGGCCGCC TCGGGGCCCTCACGCTCCAAGCACCACTCCCGACTCAGCGCCGCCTTTTCCGTCGAGTCCGAAGCCACCATCACA CCCGAGAGGTACACCAGAACGCTGTCACAGGAGCGGACGAGGGGCCCGACGTCGGCGGCCAAGCCCGGGAAGCCG TCGGCGCTGGCCGGTTTCGTCGGCTCCTTTACGGGCTGCGGCGCTCTCGTCTCGCTGGCTCTGTTCCTGCCGCTG CCGGCGAGGTTTGGCCGGATCGACGGTGTCACGCCCGGGCAAGCCGTCGAGTACAGCTTCTACGTGGTGGGGGCC GTGTCTCTGGCCGTCGCCTCGTTCGTCTCCATCGGATTGCGCAACCTGAGGGGCGAAGAAGGGAAAGGCTGGAAA GCGCTGTTCGGCATGCGCAGTCGATACGATGCTCTCGACCGGCTCGAGCAGGACGACGCGTGCAGGAGACCGAGA CCGAAGAGGGACGTGCTCCCCTACCTTGGCTTGATGAGGGACTCGGTGTGGCTAGGCTTGACGGATTCGAGGATA GCCATGGGCTATATCGGCGGATTCGTTGCGAGGGCGTCTACCGTGGCCATCTCCCTCTTCATCCCGCTGCTGGTC AACACCTTCTTCATCGACAACGGCTTCTGCCACGGCTCGCCTAACGATCCGTCACCCGAGCTGAAGAAAGAATGC CGGGCGGCCTACGTGCTGTCGTCGATCCTGACGGGAGTCGCTCAGCTGATGGGTCTCGTGTGCGCGCCCCTGTTC GGCTATCTGTCGGGGCGGACCAGACGGGTCAACTATCCCGTGGTGGCGGCCAGCTCGCTAGGCATCATCGGATAC ATGACGCTGCCTCACCTGTCGAGCCCCGAGGTGACGGATGTGGACGGACGGGGCGGCACACCGGCCATCCTGGTC GTCGTCGCGGCTGTGGGCGTCAGCCAGATCGGGGCTATCGTCTGCAGCCTGGGATCACTGGGCCAGGGCGTCCTG GAGGCGGAGCTGCCGCCATCAGCTATCGGCGACCAGGCGTCGATGACGGCTGTAGATGAGGCTGAAACCGAGGCC GAGGCCGAGGACGAGGACGACGGGGCCGTCGAGTCGGATCCGCTCGTATCCGCGCCGGCCGAAAGCGAGCCGTCG TCTAGGGTGCGGCTCAAGGGATCCATTGCCGGCATCTACTCGCTCTGCGGGGGCGCGGCCATCCTGATCCTCACC AAGGTTGGAGGCTTGCTGTTTGACCGGTTGTCGCACGGGGCGCCGTTTTACATGATGGCCGGCTTCAACGCCATC TGGCTCGTGGCCAGCCTGCTGCTGGACGCCTCTCAGGCTTATGCAGCCAGCTGA |
| Gene | >Ophcf2|07104 ATGATGTCGTCCATCTCGCGATTCCTGCCCTTCTCGGCGTCGGTGACTACGGCCCAGGCCACGACGTATCTGCTG GGCGTCTCGCTCTTCTCCATCTCCTTTCTCGTCTTCCTGAACAGCTCTGTTTCGTTTGTGATTACCGACCTGATC GGCCAAAAGGACAACGTCGGCGATGTCGTCGGAACCCTGGGCTTCGCCGACGAGCTGGTAGCCCTGGTGGCCTGT CCGGCTTGGGGACTCGTTTCGGACCGGCTGGGCGTGCGGTGGGTGGCAACCATCGGCTACGCTATCATCGGTCTC GCGTTGGCCGTCTTCGTTCAGGCCCGAAATGTGTATCCTCAGCTACTGCTCGCCCGTCTGTTCTTCGCAGTCGGC GCCTCGGCATCGTGAGTCCTTTTATTGCGCCGCGGTGACGAACTGAGCTGGGCTGACGGCGATACGTAGCGCCAC CATGGTCACCGCCATACTCCCCTCGTTGACGGACGAGGCTGATCCCGTGACGGCCGCCTCGGGGCCCTCACGCTC CAAGCACCACTCCCGACTCAGCGCCGCCTTTTCCGTCGAGTCCGAAGCCACCATCACACCCGAGAGGTACACCAG AACGCTGTCACAGGAGCGGACGAGGGGCCCGACGTCGGCGGCCAAGCCCGGGAAGCCGTCGGCGCTGGCCGGTTT CGTCGGCTCCTTTACGGGCTGCGGCGCTCTCGTCTCGCTGGCTCTGTTCCTGCCGCTGCCGGCGAGGTTTGGCCG GATCGACGGTGTCACGCCCGGGCAAGCCGTCGAGTACAGCTTCTACGTGGTGGGGGCCGTGTCTCTGGCCGTCGC CTCGTTCGTCTCCATCGGATTGCGCAACCTGAGGGGCGAAGAAGGGAAAGGCTGGAAAGCGCTGTTCGGCATGCG CAGTCGATACGATGCTCTCGACCGGCTCGAGCAGGACGACGCGTGCAGGAGACCGAGACCGAAGAGGGTAGGGGT TGTTTTCTCTCGGCCGCAGGCCATGGACATCATCAGGTGGGCTGACTGGCTGCCGCAGGACGTGCTCCCCTACCT TGGCTTGATGAGGGACTCGGTGTGGCTAGGCTTGACGGATTCGAGGATAGCCATGGGCTATATCGGCGGATTCGT TGCGAGGGCGTCTACCGTGGCCATCTCCCTCTTCATCCCGCTGCTGGTCAACACCTTCTTCATCGACAACGGCTT CTGCCACGGCTCGCCTAACGATCCGTCACCCGAGCTGAAGAAAGAATGCCGGGCGGCCTACGTGCTGTCGTCGAT CCTGACGGGAGTCGCTCAGCTGATGGGTCTCGTGTGCGCGCCCCTGTTCGGCTATCTGTCGGGGCGGACCAGACG GGTCAACTATCCCGTGGTGGCGGCCAGCTCGCTAGGCATCATCGGATACATGACGCTGCCTCACCTGTCGAGCCC CGAGGTGACGGATGTGGACGGACGGGGCGGCACACCGGCCATCCTGGTCGTCGTCGCGGCTGTGGGCGTCAGCCA GATCGGGGCTATCGTCTGCAGCCTGGGATCACTGGGCCAGGGCGTCCTGGAGGCGGAGCTGCCGCCATCAGCTAT CGGCGACCAGGCGTCGATGACGGCTGTAGATGAGGCTGAAACCGAGGCCGAGGCCGAGGACGAGGACGACGGGGC CGTCGAGTCGGATCCGCTCGTATCCGCGCCGGCCGAAAGCGAGCCGTCGTCTAGGGTGCGGCTCAAGGGATCCAT TGCCGGCATCTACTCGCTCTGCGGGGGCGCGGCCATCCTGATCCTCACCAAGGTTGGAGGCTTGCTGTTTGACCG GTTGTCGCACGGGGCGCCGTTTTACATGATGGCCGGCTTCAACGCCATCTGGCTCGTGGCCAGCCTGCTGCTGGA CGCCTCTCAGGCTTATGCAGCCAGCTGA |