Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07091
Gene name
Locationscaffold_09:578995..580654
Strand+
Gene length (bp)1659
Transcript length (bp)1659
Coding sequence length (bp)1659
Protein length (aa) 553

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 1.1E-16 90 234
PF08386 Abhydrolase_4 TAP-like protein 5.1E-22 427 514

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 23.82 12.27 35.37
Alive In ants, during behavior modification 25.70 13.11 38.29
Dead In ants, recently dead 17.77 8.61 26.93

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.771746 no
Alive Dead 0.051821 no
Dead Fungus 0.206861 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07091
MRSLFLYLAASTVFHATAYSADEKPKDPAKKYPGENISWTPCGNTTEGTPLECSDIDVPADQFAPKNQTSKLKFN
IPLIRLRSKNGTKNLLFNPGGPGASGVENTIKVGDGIFNATGRDYHILSFDPRGVKGSEPNASCSSLTQPEPSSP
FTIGDAKLYAWATTWGKSCADIMGEHGKFINTPQTAADMNSILDAVGQSDMYYLGVSYGSLLGQTYASLFPNRSA
RVIIDSVAHLSEYYESKVETANYNFTAEVWEGFISECFKAGNRCPLSSRAGSDKELLDKVTSFIDGLGPEPMSTY
VNATVNGFLTARDVWGGILSDLYNPGLWNMTATAVDQMMNGNGTEALLRWMPGGGEEEAEQEEDEEEKRPGVEES
SRSVIRANDRPSGPAAWSQGLDSLVEELTPFYQNNKSKRWFEGWQPDYYMLQQWPINKTHSFQVTKDVKTAFPLL
ILQNQFDPVTPLVGAQFASETFNSSRLVVADQYGHTAIGTNDCVDESVRAYLGNGTLPNNGTVCQSEVKYFTPQN
ETKGFMQLDDDMSDGNGESDDEGIPPI*
Coding >Ophcf2|07091
ATGCGGTCTTTATTTCTGTACCTCGCCGCCTCGACCGTCTTTCACGCCACGGCCTATTCCGCAGACGAGAAGCCC
AAGGACCCGGCCAAGAAGTACCCCGGCGAAAACATCAGCTGGACCCCCTGCGGAAACACGACCGAGGGCACTCCG
CTGGAATGCAGCGATATTGACGTGCCGGCGGATCAGTTCGCACCCAAGAACCAGACGAGCAAGCTCAAGTTCAAC
ATCCCGCTCATCCGACTCCGCAGCAAGAATGGGACCAAGAACCTACTGTTCAACCCCGGCGGACCTGGCGCAAGT
GGCGTTGAAAACACCATCAAGGTCGGAGATGGCATCTTTAACGCTACCGGACGTGACTATCACATCTTGTCGTTT
GACCCTCGTGGCGTCAAAGGGTCGGAACCGAACGCGTCCTGCTCCTCGTTGACGCAGCCTGAGCCGTCGAGTCCG
TTCACGATTGGGGACGCGAAGCTGTACGCTTGGGCGACCACCTGGGGCAAGTCATGCGCCGACATCATGGGCGAG
CACGGGAAGTTCATCAACACTCCGCAGACGGCGGCCGACATGAACAGCATTCTCGACGCCGTCGGCCAGAGCGAC
ATGTACTATCTCGGCGTCAGCTACGGTTCTCTGCTGGGGCAGACGTACGCCAGCTTATTCCCGAACCGGTCCGCG
CGAGTCATCATCGACAGCGTTGCGCATCTGTCAGAATACTACGAATCAAAAGTCGAGACTGCCAACTACAACTTC
ACTGCGGAGGTTTGGGAGGGCTTCATCAGCGAGTGTTTCAAGGCCGGTAACCGCTGCCCGTTGTCATCGCGCGCG
GGTTCCGATAAAGAGCTTCTCGATAAGGTGACGAGCTTCATCGACGGGCTCGGGCCGGAACCGATGAGCACTTAC
GTCAACGCGACAGTTAACGGTTTTCTTACCGCTCGTGACGTATGGGGTGGAATTCTTTCAGATCTTTATAATCCT
GGCTTGTGGAATATGACGGCTACAGCTGTCGATCAAATGATGAACGGGAACGGCACGGAAGCACTCTTGCGATGG
ATGCCAGGCGGAGGAGAAGAAGAAGCAGAGCAGGAAGAAGACGAAGAGGAAAAGAGGCCTGGAGTGGAAGAATCG
TCGAGATCCGTCATCCGGGCGAACGATCGTCCCTCCGGACCGGCAGCCTGGTCTCAGGGTCTGGACTCGCTTGTC
GAAGAGCTCACCCCCTTTTATCAAAACAACAAGTCGAAACGCTGGTTCGAGGGGTGGCAACCGGATTACTACATG
CTGCAGCAGTGGCCAATCAATAAGACGCATTCCTTCCAGGTAACCAAGGACGTCAAGACGGCTTTCCCTCTGCTC
ATTCTGCAGAACCAGTTCGACCCCGTCACCCCCTTGGTCGGAGCTCAGTTCGCCAGCGAGACGTTTAACAGCTCG
CGTCTCGTCGTGGCAGACCAATATGGACACACGGCAATAGGAACCAACGACTGCGTCGACGAGAGCGTGCGGGCT
TATCTAGGTAACGGGACGCTGCCGAATAACGGCACCGTGTGCCAGTCTGAGGTGAAGTATTTCACGCCTCAGAAC
GAAACAAAGGGATTTATGCAGCTTGACGATGACATGAGCGATGGGAATGGAGAGTCAGATGATGAAGGTATTCCG
CCTATTTGA
Transcript >Ophcf2|07091
ATGCGGTCTTTATTTCTGTACCTCGCCGCCTCGACCGTCTTTCACGCCACGGCCTATTCCGCAGACGAGAAGCCC
AAGGACCCGGCCAAGAAGTACCCCGGCGAAAACATCAGCTGGACCCCCTGCGGAAACACGACCGAGGGCACTCCG
CTGGAATGCAGCGATATTGACGTGCCGGCGGATCAGTTCGCACCCAAGAACCAGACGAGCAAGCTCAAGTTCAAC
ATCCCGCTCATCCGACTCCGCAGCAAGAATGGGACCAAGAACCTACTGTTCAACCCCGGCGGACCTGGCGCAAGT
GGCGTTGAAAACACCATCAAGGTCGGAGATGGCATCTTTAACGCTACCGGACGTGACTATCACATCTTGTCGTTT
GACCCTCGTGGCGTCAAAGGGTCGGAACCGAACGCGTCCTGCTCCTCGTTGACGCAGCCTGAGCCGTCGAGTCCG
TTCACGATTGGGGACGCGAAGCTGTACGCTTGGGCGACCACCTGGGGCAAGTCATGCGCCGACATCATGGGCGAG
CACGGGAAGTTCATCAACACTCCGCAGACGGCGGCCGACATGAACAGCATTCTCGACGCCGTCGGCCAGAGCGAC
ATGTACTATCTCGGCGTCAGCTACGGTTCTCTGCTGGGGCAGACGTACGCCAGCTTATTCCCGAACCGGTCCGCG
CGAGTCATCATCGACAGCGTTGCGCATCTGTCAGAATACTACGAATCAAAAGTCGAGACTGCCAACTACAACTTC
ACTGCGGAGGTTTGGGAGGGCTTCATCAGCGAGTGTTTCAAGGCCGGTAACCGCTGCCCGTTGTCATCGCGCGCG
GGTTCCGATAAAGAGCTTCTCGATAAGGTGACGAGCTTCATCGACGGGCTCGGGCCGGAACCGATGAGCACTTAC
GTCAACGCGACAGTTAACGGTTTTCTTACCGCTCGTGACGTATGGGGTGGAATTCTTTCAGATCTTTATAATCCT
GGCTTGTGGAATATGACGGCTACAGCTGTCGATCAAATGATGAACGGGAACGGCACGGAAGCACTCTTGCGATGG
ATGCCAGGCGGAGGAGAAGAAGAAGCAGAGCAGGAAGAAGACGAAGAGGAAAAGAGGCCTGGAGTGGAAGAATCG
TCGAGATCCGTCATCCGGGCGAACGATCGTCCCTCCGGACCGGCAGCCTGGTCTCAGGGTCTGGACTCGCTTGTC
GAAGAGCTCACCCCCTTTTATCAAAACAACAAGTCGAAACGCTGGTTCGAGGGGTGGCAACCGGATTACTACATG
CTGCAGCAGTGGCCAATCAATAAGACGCATTCCTTCCAGGTAACCAAGGACGTCAAGACGGCTTTCCCTCTGCTC
ATTCTGCAGAACCAGTTCGACCCCGTCACCCCCTTGGTCGGAGCTCAGTTCGCCAGCGAGACGTTTAACAGCTCG
CGTCTCGTCGTGGCAGACCAATATGGACACACGGCAATAGGAACCAACGACTGCGTCGACGAGAGCGTGCGGGCT
TATCTAGGTAACGGGACGCTGCCGAATAACGGCACCGTGTGCCAGTCTGAGGTGAAGTATTTCACGCCTCAGAAC
GAAACAAAGGGATTTATGCAGCTTGACGATGACATGAGCGATGGGAATGGAGAGTCAGATGATGAAGGTATTCCG
CCTATTTGA
Gene >Ophcf2|07091
ATGCGGTCTTTATTTCTGTACCTCGCCGCCTCGACCGTCTTTCACGCCACGGCCTATTCCGCAGACGAGAAGCCC
AAGGACCCGGCCAAGAAGTACCCCGGCGAAAACATCAGCTGGACCCCCTGCGGAAACACGACCGAGGGCACTCCG
CTGGAATGCAGCGATATTGACGTGCCGGCGGATCAGTTCGCACCCAAGAACCAGACGAGCAAGCTCAAGTTCAAC
ATCCCGCTCATCCGACTCCGCAGCAAGAATGGGACCAAGAACCTACTGTTCAACCCCGGCGGACCTGGCGCAAGT
GGCGTTGAAAACACCATCAAGGTCGGAGATGGCATCTTTAACGCTACCGGACGTGACTATCACATCTTGTCGTTT
GACCCTCGTGGCGTCAAAGGGTCGGAACCGAACGCGTCCTGCTCCTCGTTGACGCAGCCTGAGCCGTCGAGTCCG
TTCACGATTGGGGACGCGAAGCTGTACGCTTGGGCGACCACCTGGGGCAAGTCATGCGCCGACATCATGGGCGAG
CACGGGAAGTTCATCAACACTCCGCAGACGGCGGCCGACATGAACAGCATTCTCGACGCCGTCGGCCAGAGCGAC
ATGTACTATCTCGGCGTCAGCTACGGTTCTCTGCTGGGGCAGACGTACGCCAGCTTATTCCCGAACCGGTCCGCG
CGAGTCATCATCGACAGCGTTGCGCATCTGTCAGAATACTACGAATCAAAAGTCGAGACTGCCAACTACAACTTC
ACTGCGGAGGTTTGGGAGGGCTTCATCAGCGAGTGTTTCAAGGCCGGTAACCGCTGCCCGTTGTCATCGCGCGCG
GGTTCCGATAAAGAGCTTCTCGATAAGGTGACGAGCTTCATCGACGGGCTCGGGCCGGAACCGATGAGCACTTAC
GTCAACGCGACAGTTAACGGTTTTCTTACCGCTCGTGACGTATGGGGTGGAATTCTTTCAGATCTTTATAATCCT
GGCTTGTGGAATATGACGGCTACAGCTGTCGATCAAATGATGAACGGGAACGGCACGGAAGCACTCTTGCGATGG
ATGCCAGGCGGAGGAGAAGAAGAAGCAGAGCAGGAAGAAGACGAAGAGGAAAAGAGGCCTGGAGTGGAAGAATCG
TCGAGATCCGTCATCCGGGCGAACGATCGTCCCTCCGGACCGGCAGCCTGGTCTCAGGGTCTGGACTCGCTTGTC
GAAGAGCTCACCCCCTTTTATCAAAACAACAAGTCGAAACGCTGGTTCGAGGGGTGGCAACCGGATTACTACATG
CTGCAGCAGTGGCCAATCAATAAGACGCATTCCTTCCAGGTAACCAAGGACGTCAAGACGGCTTTCCCTCTGCTC
ATTCTGCAGAACCAGTTCGACCCCGTCACCCCCTTGGTCGGAGCTCAGTTCGCCAGCGAGACGTTTAACAGCTCG
CGTCTCGTCGTGGCAGACCAATATGGACACACGGCAATAGGAACCAACGACTGCGTCGACGAGAGCGTGCGGGCT
TATCTAGGTAACGGGACGCTGCCGAATAACGGCACCGTGTGCCAGTCTGAGGTGAAGTATTTCACGCCTCAGAAC
GAAACAAAGGGATTTATGCAGCTTGACGATGACATGAGCGATGGGAATGGAGAGTCAGATGATGAAGGTATTCCG
CCTATTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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