Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07055
Gene name
Locationscaffold_09:484559..485682
Strand-
Gene length (bp)1123
Transcript length (bp)1041
Coding sequence length (bp)1041
Protein length (aa) 347

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03820 SFXNs Sideroflexins 3.9E-121 11 346

GO

GO Term Description Terminal node
GO:0015075 ion transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0006811 ion transport Yes
GO:0055085 transmembrane transport Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0022857 transmembrane transporter activity No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.45

Transmembrane Domains

Domain # Start End Length
1 144 163 19
2 178 200 22
3 293 315 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07055
MSSSLPGSRELPVSQYDLSTYWGRVRHAMGITDPSTLFAGKVGLERAKKLVTDYKTGKTLEMSPELWQAKKTVDS
TLHPDTGEPVLLPLRMSCFVLTNLVVTAGMLQPGLQTAGTVAWQVANQSVNVAVNSANANKTSPMTTAVLAKSYL
VAVTASCSVALGLNRLVPRLPLKPPTRALLSRLVPFAAVASAGALNAYLMRRGEIQTGIDVRPVLDPHDKRRPQD
VPPLGKSRKAAKMAVYETAASRVFNSSPVMVLPPMLLYHIQHKQAWYAHLMQGQWVRARPRLATTIPIGINLALI
AATAFAVLPLALAVFPQQQQTAADSLEEEFHGRGGCDGKVWFNRGL*
Coding >Ophcf2|07055
ATGTCTTCGTCTCTCCCGGGCTCGCGCGAGCTCCCCGTATCGCAGTATGACCTCAGTACCTACTGGGGCCGAGTC
CGGCACGCCATGGGCATCACAGATCCCAGCACCCTCTTCGCCGGCAAGGTCGGACTCGAAAGAGCAAAGAAGCTG
GTGACGGATTACAAGACGGGCAAGACGCTCGAGATGAGCCCCGAGCTATGGCAGGCCAAGAAGACGGTCGACTCG
ACCCTCCACCCAGACACGGGAGAGCCCGTCCTCCTCCCACTTCGCATGTCGTGCTTCGTCCTGACCAACCTCGTC
GTGACGGCCGGAATGCTACAGCCAGGCTTGCAGACAGCCGGAACCGTCGCCTGGCAGGTAGCCAACCAGTCTGTC
AACGTGGCCGTCAACAGCGCAAACGCCAACAAGACTTCGCCCATGACGACGGCCGTGCTGGCAAAGTCGTACCTC
GTCGCCGTCACCGCTTCGTGCTCCGTCGCCCTCGGCCTGAACCGTCTCGTGCCCCGGCTGCCGCTGAAGCCGCCT
ACGCGCGCCCTTCTCTCCCGCCTCGTGCCCTTTGCCGCCGTCGCCTCGGCTGGTGCCCTCAACGCCTACCTGATG
CGTCGCGGCGAGATACAGACGGGCATCGACGTCCGTCCCGTCCTCGATCCCCATGATAAGCGGAGGCCGCAAGAT
GTCCCGCCCCTGGGCAAGAGCCGCAAGGCCGCCAAGATGGCTGTCTACGAGACGGCTGCGAGCCGCGTCTTCAAT
AGCAGCCCCGTCATGGTGCTGCCGCCCATGCTGCTCTACCACATCCAGCATAAACAGGCCTGGTACGCGCATCTG
ATGCAGGGGCAATGGGTCAGGGCTAGACCCAGGCTGGCCACGACCATCCCCATCGGCATCAACCTCGCCCTGATT
GCCGCCACTGCCTTTGCCGTTCTGCCTCTGGCCCTCGCCGTCTTCCCGCAACAGCAGCAGACGGCGGCCGACAGT
CTCGAGGAAGAGTTTCACGGCCGCGGCGGCTGCGACGGCAAGGTGTGGTTCAACCGTGGCCTCTGA
Transcript >Ophcf2|07055
ATGTCTTCGTCTCTCCCGGGCTCGCGCGAGCTCCCCGTATCGCAGTATGACCTCAGTACCTACTGGGGCCGAGTC
CGGCACGCCATGGGCATCACAGATCCCAGCACCCTCTTCGCCGGCAAGGTCGGACTCGAAAGAGCAAAGAAGCTG
GTGACGGATTACAAGACGGGCAAGACGCTCGAGATGAGCCCCGAGCTATGGCAGGCCAAGAAGACGGTCGACTCG
ACCCTCCACCCAGACACGGGAGAGCCCGTCCTCCTCCCACTTCGCATGTCGTGCTTCGTCCTGACCAACCTCGTC
GTGACGGCCGGAATGCTACAGCCAGGCTTGCAGACAGCCGGAACCGTCGCCTGGCAGGTAGCCAACCAGTCTGTC
AACGTGGCCGTCAACAGCGCAAACGCCAACAAGACTTCGCCCATGACGACGGCCGTGCTGGCAAAGTCGTACCTC
GTCGCCGTCACCGCTTCGTGCTCCGTCGCCCTCGGCCTGAACCGTCTCGTGCCCCGGCTGCCGCTGAAGCCGCCT
ACGCGCGCCCTTCTCTCCCGCCTCGTGCCCTTTGCCGCCGTCGCCTCGGCTGGTGCCCTCAACGCCTACCTGATG
CGTCGCGGCGAGATACAGACGGGCATCGACGTCCGTCCCGTCCTCGATCCCCATGATAAGCGGAGGCCGCAAGAT
GTCCCGCCCCTGGGCAAGAGCCGCAAGGCCGCCAAGATGGCTGTCTACGAGACGGCTGCGAGCCGCGTCTTCAAT
AGCAGCCCCGTCATGGTGCTGCCGCCCATGCTGCTCTACCACATCCAGCATAAACAGGCCTGGTACGCGCATCTG
ATGCAGGGGCAATGGGTCAGGGCTAGACCCAGGCTGGCCACGACCATCCCCATCGGCATCAACCTCGCCCTGATT
GCCGCCACTGCCTTTGCCGTTCTGCCTCTGGCCCTCGCCGTCTTCCCGCAACAGCAGCAGACGGCGGCCGACAGT
CTCGAGGAAGAGTTTCACGGCCGCGGCGGCTGCGACGGCAAGGTGTGGTTCAACCGTGGCCTCTGA
Gene >Ophcf2|07055
ATGTCTTCGTCTCTCCCGGGCTCGCGCGAGCTCCCCGTATCGCAGTATGACCTCAGTACCTACTGGGGCCGAGTC
CGGCACGCCATGGGCATCACAGATCCCAGGTTCACACTCCTTCAGACCTGATACCTCGGAGAGAAGAGAATGCCT
CGCCGCTGACCCTTCTTCCCCTTCCCTCTTCTCCAGCACCCTCTTCGCCGGCAAGGTCGGACTCGAAAGAGCAAA
GAAGCTGGTGACGGATTACAAGACGGGCAAGACGCTCGAGATGAGCCCCGAGCTATGGCAGGCCAAGAAGACGGT
CGACTCGACCCTCCACCCAGACACGGGAGAGCCCGTCCTCCTCCCACTTCGCATGTCGTGCTTCGTCCTGACCAA
CCTCGTCGTGACGGCCGGAATGCTACAGCCAGGCTTGCAGACAGCCGGAACCGTCGCCTGGCAGGTAGCCAACCA
GTCTGTCAACGTGGCCGTCAACAGCGCAAACGCCAACAAGACTTCGCCCATGACGACGGCCGTGCTGGCAAAGTC
GTACCTCGTCGCCGTCACCGCTTCGTGCTCCGTCGCCCTCGGCCTGAACCGTCTCGTGCCCCGGCTGCCGCTGAA
GCCGCCTACGCGCGCCCTTCTCTCCCGCCTCGTGCCCTTTGCCGCCGTCGCCTCGGCTGGTGCCCTCAACGCCTA
CCTGATGCGTCGCGGCGAGATACAGACGGGCATCGACGTCCGTCCCGTCCTCGATCCCCATGATAAGCGGAGGCC
GCAAGATGTCCCGCCCCTGGGCAAGAGCCGCAAGGCCGCCAAGATGGCTGTCTACGAGACGGCTGCGAGCCGCGT
CTTCAATAGCAGCCCCGTCATGGTGCTGCCGCCCATGCTGCTCTACCACATCCAGCATAAACAGGCCTGGTACGC
GCATCTGATGCAGGGGCAATGGGTCAGGGCTAGACCCAGGCTGGCCACGACCATCCCCATCGGCATCAACCTCGC
CCTGATTGCCGCCACTGCCTTTGCCGTTCTGCCTCTGGCCCTCGCCGTCTTCCCGCAACAGCAGCAGACGGCGGC
CGACAGTCTCGAGGAAGAGTTTCACGGCCGCGGCGGCTGCGACGGCAAGGTGTGGTTCAACCGTGGCCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail