© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|07037 |
| Gene name | |
| Location | scaffold_09:431404..433753 |
| Strand | - |
| Gene length (bp) | 2349 |
| Transcript length (bp) | 2295 |
| Coding sequence length (bp) | 2295 |
| Protein length (aa) | 765 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11815 | DUF3336 | Domain of unknown function (DUF3336) | 1.6E-52 | 195 | 351 |
| PF01734 | Patatin | Patatin-like phospholipase | 1.8E-16 | 359 | 548 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004806 | triglyceride lipase activity | Yes |
| GO:0006629 | lipid metabolic process | Yes |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0052689 | carboxylic ester hydrolase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0008150 | biological_process | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0003674 | molecular_function | No |
| GO:0016298 | lipase activity | No |
| GO:0016787 | hydrolase activity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.2116 | 0.221 | 0.0291 | 0.1058 | 0.168 | 0.0081 | 0.7139 | 0.2257 | 0.4828 | 0.1552 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 168 | 190 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 74.89 | 41.72 | 108.05 |
| Alive | In ants, during behavior modification | 54.36 | 30.89 | 77.83 |
| Dead | In ants, recently dead | 69.26 | 38.82 | 99.71 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.095815 | no |
| Alive | Dead | 0.148967 | no |
| Dead | Fungus | 0.740946 | no |
| Orthofinder run ID | 4 |
| Orthogroup | 521 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|07037 MAAKKLTDGFPAEAFDESRLPDLDVDFIDAADLLAFERALRAPDPLLSPSPEKASVRSASSSQYNVARVTKRTSQ VGSFFDDDAAALLAAVVAGGDLPATSSTGVGAGAALSTATTPPPPPRVDSLKNGSRGSRRRRRKRAKDALLGTRT KDETREGHLYQLFKWPLLLFVGTWLAGLSVAYVMTRWYIWGYEYFIAWRGRRETLRRKMRSTSSYRDWVVAAREL DGFLGRQRWREEDDFAYYDSRTVRRVWEQMRRLRTRAEARETMATVMAADKEGDDRPADGLRALLEACVKNNFVG VESSRLYSQTFYGTKNLVQNFIDEVEASLKFIISTRQLEADAKRRLFRHAHANYGRTALCLSGGAAFAYYHLGVV RALLDADQLPDVLAGTSGGALVAALAGTRTNDELGRLLVPALARRITACSEPLTAWLPRWWRTGARFDALAWAAH CSWWTRGSLTFREAYERTGRVLNISCVPADPHSPAILCNYLTSPDCVIWSAVLASAAVPGILNPVVLMAKTWDGT LAPYSFGHKWKDGSLRTDIPIKALNTYFNVNFTIVSQVNPHVNAFFFSSRGSVGHPVAHRKGRGWRGGYLMSAIE NYLKLDMHKWLRFIRHAELLPRPLGQDWSQLWLQDFSGNITIWPRSRPSDYWYILSDPDARRLARILHEGRQSAF PKLKFIANRLRVERLVEQGRKEMRRAAARSDGEEEEEEEEEEEEEGLTSLLVGDITESVASEGAGEEDEETEGEE AYGRADAIEGKTGL* |
| Coding | >Ophcf2|07037 ATGGCGGCCAAGAAGCTGACGGACGGCTTCCCCGCCGAGGCCTTTGACGAATCACGGCTACCGGATCTCGACGTC GACTTCATAGACGCAGCCGACCTGCTGGCCTTTGAACGTGCTCTGCGGGCTCCCGATCCGCTACTGAGCCCGAGT CCCGAGAAGGCCAGTGTTCGGTCAGCATCGTCCTCCCAGTACAACGTCGCCCGCGTGACGAAGCGGACGTCGCAG GTGGGCAGCTTCTTTGACGATGACGCGGCGGCGCTGCTGGCGGCTGTGGTGGCGGGCGGCGATCTTCCCGCTACC TCTAGCACTGGTGTTGGTGCTGGTGCCGCTCTTAGCACCGCTACCACTCCTCCTCCTCCTCCACGCGTCGACAGC CTGAAGAATGGCTCTCGCGGCAGCAGAAGACGACGTCGCAAGCGGGCCAAGGATGCCCTTCTCGGCACGCGTACC AAGGATGAGACGCGCGAGGGCCATCTCTACCAGCTGTTCAAATGGCCGCTTCTGCTCTTCGTCGGCACGTGGCTT GCCGGGCTGAGCGTGGCATACGTCATGACGAGATGGTATATCTGGGGGTACGAATACTTTATCGCCTGGAGGGGA CGACGGGAGACGCTGAGACGAAAGATGCGGTCGACGTCGAGTTATCGCGACTGGGTTGTTGCTGCTCGTGAACTT GATGGTTTTTTGGGGAGGCAGCGGTGGAGGGAGGAGGATGACTTTGCCTACTATGATTCCAGGACGGTGAGGCGT GTGTGGGAGCAGATGCGAAGGTTGAGGACGAGGGCTGAGGCGCGAGAGACCATGGCGACGGTGATGGCTGCGGAT AAAGAGGGTGATGACAGACCGGCCGATGGGTTGCGGGCGCTGCTCGAGGCCTGCGTAAAGAACAACTTTGTTGGC GTTGAGAGCTCGAGGCTTTACAGCCAGACGTTTTACGGCACCAAGAACCTGGTACAGAACTTCATCGACGAAGTC GAGGCCAGCCTCAAGTTCATCATCTCGACACGCCAGCTCGAAGCCGATGCCAAACGTCGTCTCTTCCGCCACGCC CACGCAAACTACGGCCGTACAGCCCTTTGCTTATCCGGCGGCGCTGCCTTCGCCTACTACCATCTCGGCGTCGTT CGCGCCCTGCTCGACGCAGATCAGCTTCCGGACGTGCTGGCGGGTACCAGCGGCGGTGCCCTCGTCGCTGCTCTG GCTGGGACCCGAACGAACGATGAACTTGGTCGGCTGCTGGTACCGGCTCTGGCTCGTCGTATCACCGCCTGCAGT GAGCCGCTGACGGCTTGGCTGCCGCGCTGGTGGCGGACCGGCGCGAGGTTTGATGCTCTGGCTTGGGCTGCTCAT TGTAGTTGGTGGACGAGGGGGTCGCTGACCTTTCGTGAGGCTTACGAGAGGACCGGGCGAGTGCTGAACATTTCC TGTGTGCCTGCTGATCCGCACTCACCGGCTATTCTCTGCAACTACCTGACGAGCCCGGACTGCGTTATCTGGTCG GCTGTGTTAGCATCGGCCGCTGTGCCGGGCATCTTGAATCCGGTCGTTCTCATGGCCAAGACCTGGGACGGTACG CTGGCGCCGTACTCGTTTGGTCATAAGTGGAAGGACGGTAGCCTACGGACGGACATTCCCATCAAGGCGCTTAAC ACCTATTTCAACGTCAACTTTACCATCGTGAGCCAGGTTAACCCTCACGTCAACGCCTTCTTCTTTTCCTCACGC GGCTCCGTCGGTCACCCGGTCGCTCACCGCAAGGGCCGGGGCTGGAGGGGCGGCTATCTGATGTCAGCCATCGAG AACTACCTCAAGCTCGACATGCACAAGTGGCTACGCTTCATACGGCACGCTGAGCTGCTCCCGCGTCCGCTGGGT CAAGACTGGAGCCAGCTATGGCTCCAAGACTTTAGCGGCAACATTACGATCTGGCCGCGGTCTAGGCCGTCGGAT TACTGGTACATTCTGTCGGACCCGGACGCGAGGCGGCTGGCGCGGATCCTGCACGAGGGGAGGCAGAGCGCGTTC CCCAAGCTCAAATTCATAGCCAACCGGTTGCGGGTCGAGAGGCTGGTCGAGCAAGGGAGGAAGGAAATGCGCAGG GCGGCGGCGCGGTCTGACGGAGAGGAAGAGGAGGAAGAGGAGGAAGAGGAGGAAGAGGAGGGGTTGACGAGTTTG TTGGTGGGCGATATAACGGAGTCGGTGGCGAGCGAAGGGGCGGGAGAGGAAGATGAGGAGACGGAAGGGGAGGAG GCTTATGGGAGGGCGGATGCGATTGAGGGAAAGACGGGATTATAA |
| Transcript | >Ophcf2|07037 ATGGCGGCCAAGAAGCTGACGGACGGCTTCCCCGCCGAGGCCTTTGACGAATCACGGCTACCGGATCTCGACGTC GACTTCATAGACGCAGCCGACCTGCTGGCCTTTGAACGTGCTCTGCGGGCTCCCGATCCGCTACTGAGCCCGAGT CCCGAGAAGGCCAGTGTTCGGTCAGCATCGTCCTCCCAGTACAACGTCGCCCGCGTGACGAAGCGGACGTCGCAG GTGGGCAGCTTCTTTGACGATGACGCGGCGGCGCTGCTGGCGGCTGTGGTGGCGGGCGGCGATCTTCCCGCTACC TCTAGCACTGGTGTTGGTGCTGGTGCCGCTCTTAGCACCGCTACCACTCCTCCTCCTCCTCCACGCGTCGACAGC CTGAAGAATGGCTCTCGCGGCAGCAGAAGACGACGTCGCAAGCGGGCCAAGGATGCCCTTCTCGGCACGCGTACC AAGGATGAGACGCGCGAGGGCCATCTCTACCAGCTGTTCAAATGGCCGCTTCTGCTCTTCGTCGGCACGTGGCTT GCCGGGCTGAGCGTGGCATACGTCATGACGAGATGGTATATCTGGGGGTACGAATACTTTATCGCCTGGAGGGGA CGACGGGAGACGCTGAGACGAAAGATGCGGTCGACGTCGAGTTATCGCGACTGGGTTGTTGCTGCTCGTGAACTT GATGGTTTTTTGGGGAGGCAGCGGTGGAGGGAGGAGGATGACTTTGCCTACTATGATTCCAGGACGGTGAGGCGT GTGTGGGAGCAGATGCGAAGGTTGAGGACGAGGGCTGAGGCGCGAGAGACCATGGCGACGGTGATGGCTGCGGAT AAAGAGGGTGATGACAGACCGGCCGATGGGTTGCGGGCGCTGCTCGAGGCCTGCGTAAAGAACAACTTTGTTGGC GTTGAGAGCTCGAGGCTTTACAGCCAGACGTTTTACGGCACCAAGAACCTGGTACAGAACTTCATCGACGAAGTC GAGGCCAGCCTCAAGTTCATCATCTCGACACGCCAGCTCGAAGCCGATGCCAAACGTCGTCTCTTCCGCCACGCC CACGCAAACTACGGCCGTACAGCCCTTTGCTTATCCGGCGGCGCTGCCTTCGCCTACTACCATCTCGGCGTCGTT CGCGCCCTGCTCGACGCAGATCAGCTTCCGGACGTGCTGGCGGGTACCAGCGGCGGTGCCCTCGTCGCTGCTCTG GCTGGGACCCGAACGAACGATGAACTTGGTCGGCTGCTGGTACCGGCTCTGGCTCGTCGTATCACCGCCTGCAGT GAGCCGCTGACGGCTTGGCTGCCGCGCTGGTGGCGGACCGGCGCGAGGTTTGATGCTCTGGCTTGGGCTGCTCAT TGTAGTTGGTGGACGAGGGGGTCGCTGACCTTTCGTGAGGCTTACGAGAGGACCGGGCGAGTGCTGAACATTTCC TGTGTGCCTGCTGATCCGCACTCACCGGCTATTCTCTGCAACTACCTGACGAGCCCGGACTGCGTTATCTGGTCG GCTGTGTTAGCATCGGCCGCTGTGCCGGGCATCTTGAATCCGGTCGTTCTCATGGCCAAGACCTGGGACGGTACG CTGGCGCCGTACTCGTTTGGTCATAAGTGGAAGGACGGTAGCCTACGGACGGACATTCCCATCAAGGCGCTTAAC ACCTATTTCAACGTCAACTTTACCATCGTGAGCCAGGTTAACCCTCACGTCAACGCCTTCTTCTTTTCCTCACGC GGCTCCGTCGGTCACCCGGTCGCTCACCGCAAGGGCCGGGGCTGGAGGGGCGGCTATCTGATGTCAGCCATCGAG AACTACCTCAAGCTCGACATGCACAAGTGGCTACGCTTCATACGGCACGCTGAGCTGCTCCCGCGTCCGCTGGGT CAAGACTGGAGCCAGCTATGGCTCCAAGACTTTAGCGGCAACATTACGATCTGGCCGCGGTCTAGGCCGTCGGAT TACTGGTACATTCTGTCGGACCCGGACGCGAGGCGGCTGGCGCGGATCCTGCACGAGGGGAGGCAGAGCGCGTTC CCCAAGCTCAAATTCATAGCCAACCGGTTGCGGGTCGAGAGGCTGGTCGAGCAAGGGAGGAAGGAAATGCGCAGG GCGGCGGCGCGGTCTGACGGAGAGGAAGAGGAGGAAGAGGAGGAAGAGGAGGAAGAGGAGGGGTTGACGAGTTTG TTGGTGGGCGATATAACGGAGTCGGTGGCGAGCGAAGGGGCGGGAGAGGAAGATGAGGAGACGGAAGGGGAGGAG GCTTATGGGAGGGCGGATGCGATTGAGGGAAAGACGGGATTATAA |
| Gene | >Ophcf2|07037 ATGGCGGCCAAGAAGCTGACGGACGGCTTCCCCGCCGAGGCCTTTGACGAATCACGGCTACCGGATCTCGACGTC GACTTCATAGACGCAGCCGACCTGCTGGCCTTTGAACGTGCTCTGCGGGCTCCCGATCCGCTACTGAGCCCGAGT CCCGAGAAGGCCAGTGTTCGGTCAGCATCGTCCTCCCAGTACAACGTCGCCCGCGTGACGAAGCGGACGTCGCAG GTGGGCAGCTTCTTTGACGATGACGCGGCGGCGCTGCTGGCGGCTGTGGTGGCGGGCGGCGATCTTCCCGCTACC TCTAGCACTGGTGTTGGTGCTGGTGCCGCTCTTAGCACCGCTACCACTCCTCCTCCTCCTCCACGCGTCGACAGC CTGAAGAATGGCTCTCGCGGCAGCAGAAGACGACGTCGCAAGCGGGCCAAGGATGCCCTTCTCGGCACGCGTACC AAGGATGAGACGCGCGAGGGCCATCTCTACCAGCTGTTCAAATGGCCGCTTCTGCTCTTCGTCGGCACGTGGCTT GCCGGGCTGAGCGTGGCATACGTCATGACGAGATGGTATATCTGGGGGTACGAATACTTTATCGCCTGGAGGGGA CGACGGGAGACGCTGAGACGAAAGATGCGGTCGACGTCGAGTTATCGCGACTGGGTTGTTGCTGCTCGTGAACTT GATGGTTTTTTGGGGAGGCAGCGGTGGAGGGAGGAGGATGACTTTGCCTACTATGATTCCAGGACGGTGAGGCGT GTGTGGGAGCAGATGCGAAGGTTGAGGACGAGGGCTGAGGCGCGAGAGACCATGGCGACGGTGATGGCTGCGGAT AAAGAGGGTGATGACAGACCGGCCGATGGGTTGCGGGCGCTGCTCGAGGCCTGCGTAAAGAACAACTTTGTTGGC GTTGAGAGCTCGAGGCTTTACAGCCAGACGTTTTACGGCACCAAGAACCTGGTACAGAACTTCATCGACGAAGGT GATGTATGCCCCTACACGAGTCGCGGGGTGAGGCAAGGCTAACTGTGAGCAGTCGAGGCCAGCCTCAAGTTCATC ATCTCGACACGCCAGCTCGAAGCCGATGCCAAACGTCGTCTCTTCCGCCACGCCCACGCAAACTACGGCCGTACA GCCCTTTGCTTATCCGGCGGCGCTGCCTTCGCCTACTACCATCTCGGCGTCGTTCGCGCCCTGCTCGACGCAGAT CAGCTTCCGGACGTGCTGGCGGGTACCAGCGGCGGTGCCCTCGTCGCTGCTCTGGCTGGGACCCGAACGAACGAT GAACTTGGTCGGCTGCTGGTACCGGCTCTGGCTCGTCGTATCACCGCCTGCAGTGAGCCGCTGACGGCTTGGCTG CCGCGCTGGTGGCGGACCGGCGCGAGGTTTGATGCTCTGGCTTGGGCTGCTCATTGTAGTTGGTGGACGAGGGGG TCGCTGACCTTTCGTGAGGCTTACGAGAGGACCGGGCGAGTGCTGAACATTTCCTGTGTGCCTGCTGATCCGCAC TCACCGGCTATTCTCTGCAACTACCTGACGAGCCCGGACTGCGTTATCTGGTCGGCTGTGTTAGCATCGGCCGCT GTGCCGGGCATCTTGAATCCGGTCGTTCTCATGGCCAAGACCTGGGACGGTACGCTGGCGCCGTACTCGTTTGGT CATAAGTGGAAGGACGGTAGCCTACGGACGGACATTCCCATCAAGGCGCTTAACACCTATTTCAACGTCAACTTT ACCATCGTGAGCCAGGTTAACCCTCACGTCAACGCCTTCTTCTTTTCCTCACGCGGCTCCGTCGGTCACCCGGTC GCTCACCGCAAGGGCCGGGGCTGGAGGGGCGGCTATCTGATGTCAGCCATCGAGAACTACCTCAAGCTCGACATG CACAAGTGGCTACGCTTCATACGGCACGCTGAGCTGCTCCCGCGTCCGCTGGGTCAAGACTGGAGCCAGCTATGG CTCCAAGACTTTAGCGGCAACATTACGATCTGGCCGCGGTCTAGGCCGTCGGATTACTGGTACATTCTGTCGGAC CCGGACGCGAGGCGGCTGGCGCGGATCCTGCACGAGGGGAGGCAGAGCGCGTTCCCCAAGCTCAAATTCATAGCC AACCGGTTGCGGGTCGAGAGGCTGGTCGAGCAAGGGAGGAAGGAAATGCGCAGGGCGGCGGCGCGGTCTGACGGA GAGGAAGAGGAGGAAGAGGAGGAAGAGGAGGAAGAGGAGGGGTTGACGAGTTTGTTGGTGGGCGATATAACGGAG TCGGTGGCGAGCGAAGGGGCGGGAGAGGAAGATGAGGAGACGGAAGGGGAGGAGGCTTATGGGAGGGCGGATGCG ATTGAGGGAAAGACGGGATTATAA |