Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07036
Gene name
Locationscaffold_09:428452..430714
Strand-
Gene length (bp)2262
Transcript length (bp)2097
Coding sequence length (bp)2097
Protein length (aa) 699

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00226 DnaJ DnaJ domain 4.4E-15 105 173

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 76 95 19
3 203 225 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 133.00 69.41 196.59
Alive In ants, during behavior modification 149.03 75.99 222.06
Dead In ants, recently dead 108.36 57.95 158.77

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.641126 no
Alive Dead 0.077702 no
Dead Fungus 0.345438 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07036
MSSDYSYDDEAQFFPYFILTLTGLVTLPLTYSLVRPSGDDDAVAPRIQTAYRIKDAAVVESLRSAQKRKQRRVKR
TLAAVAGWALMTLMVYLVVVTEPATVKIWNPYHILGISESASEKQIKSHYKRLSVKFHPDKVRPDPAKNQTAESL
NDHYVELTKAYQALTDEDVRNNYIQYGHPDGKQSFSIGIALPKFIVSDGNGKYLVLLYTGLLGVLLPYLVGSWWY
GTKRRSKEGVLMESANNLFRQYDEGMDEAGIVAALSAGKEFEQVLRRDQAESGLSKIEARITAEGEGSPLAGGLS
PKDRQKLEDLESGVRRKALALLWAYLGRVELDDGVLTRAKYEVAPIARTLNQSFAAIALAYGNTGPIAGSFYANQ
HLIQAMPPRASPLLQLPHFTPRVVMAVEGGAKTHMTVQQFMDLPDGQRRRLAVGRGLLAEAEYRTSMAVGRQMPY
LRVARAFFKVTGERVIIPSSLVSLVIKGRFIPPGTDRVPPVEEADLEDVDPAEDDLESLMGRKTKTVKGADGRPV
SVEEKTVLPPVTFAPHYAREHRPKWYAFLSDSKQGKMAVPPFTFDRFDAPIFDEDGRPTFAMQTLKAQFAAPPQA
GHYTFVMHVICDSYVGFDTRMEVTLVVEEEGKGIAVEADDDISEPDEDSIAGQMHALKTGQAPRRRAADSDDDDS
DESGTDEEADDTSDTNTDTEDEA*
Coding >Ophcf2|07036
ATGAGCTCCGACTACTCCTACGATGACGAGGCCCAGTTCTTCCCGTACTTTATCCTGACGCTGACGGGCCTGGTC
ACGCTGCCGCTCACGTACAGCCTGGTACGGCCCAGCGGCGACGACGATGCGGTGGCGCCGCGGATCCAGACGGCA
TACCGCATCAAGGACGCTGCTGTTGTCGAGTCGTTGCGGTCGGCGCAGAAGCGAAAGCAGAGGAGGGTCAAGAGG
ACGCTGGCGGCTGTGGCTGGTTGGGCGCTTATGACTTTGATGGTTTATCTGGTGGTGGTGACGGAGCCGGCTACG
GTCAAGATCTGGAATCCGTACCACATCTTGGGCATCTCCGAGTCGGCGTCGGAGAAGCAGATCAAGTCGCATTAC
AAGCGGTTGTCGGTCAAGTTCCACCCCGACAAGGTCCGGCCCGATCCGGCCAAGAACCAGACGGCCGAATCGCTC
AACGACCACTATGTCGAGCTCACAAAGGCCTATCAGGCGCTGACGGACGAGGACGTGCGCAACAACTACATTCAG
TACGGACACCCGGACGGCAAGCAGAGCTTCAGCATTGGCATCGCGCTGCCCAAGTTCATCGTGTCCGATGGCAAC
GGCAAGTACCTGGTGCTGCTATACACGGGTCTTCTGGGCGTGCTGCTGCCGTATCTGGTCGGATCGTGGTGGTAT
GGCACCAAGCGGCGATCCAAGGAGGGTGTGCTGATGGAGAGCGCCAACAACCTGTTCCGGCAGTACGATGAGGGC
ATGGACGAGGCCGGCATCGTGGCGGCCCTGAGCGCGGGTAAGGAGTTCGAGCAGGTGCTGAGGCGCGACCAGGCC
GAGTCGGGTCTGTCCAAGATCGAGGCGCGCATCACGGCTGAGGGTGAGGGCTCGCCCCTGGCCGGCGGTCTGTCG
CCCAAGGACCGGCAGAAGCTCGAGGACCTGGAGAGCGGAGTGCGACGCAAGGCACTGGCCCTGCTGTGGGCATAT
CTGGGCCGGGTCGAGCTGGACGACGGGGTGCTGACGAGGGCCAAGTACGAGGTTGCTCCCATCGCTCGCACGCTG
AACCAGTCGTTTGCGGCCATCGCGCTGGCGTACGGAAACACGGGGCCGATCGCGGGTTCATTCTACGCCAACCAG
CACCTGATTCAGGCCATGCCTCCGAGAGCGTCGCCGCTGCTTCAGCTTCCGCACTTCACGCCGCGCGTGGTGATG
GCCGTCGAGGGAGGGGCCAAGACGCACATGACGGTACAGCAGTTCATGGACCTGCCCGACGGTCAGCGACGTCGA
CTTGCTGTTGGACGCGGCCTGCTTGCCGAGGCCGAATACCGAACCAGCATGGCGGTTGGACGACAGATGCCGTAC
CTCCGAGTGGCCAGGGCCTTCTTCAAGGTGACGGGCGAGCGCGTCATCATCCCGTCTTCGCTCGTCAGTCTCGTC
ATCAAGGGCCGCTTCATCCCGCCCGGTACGGATCGGGTGCCGCCCGTGGAAGAGGCCGATCTCGAGGACGTCGAC
CCTGCCGAGGACGACCTCGAGTCGCTCATGGGCCGCAAGACCAAGACGGTCAAGGGCGCCGACGGACGGCCCGTA
TCGGTAGAGGAGAAGACGGTGCTGCCACCGGTGACGTTTGCGCCGCACTACGCGCGAGAGCATCGTCCAAAGTGG
TACGCCTTCCTCAGCGACTCCAAGCAGGGCAAGATGGCGGTCCCTCCCTTTACCTTTGACCGCTTCGACGCGCCC
ATATTCGACGAGGATGGACGGCCTACGTTTGCCATGCAGACGCTCAAGGCGCAGTTCGCGGCTCCCCCTCAGGCG
GGACACTACACCTTTGTCATGCACGTCATCTGCGACTCGTACGTCGGCTTCGATACCAGGATGGAGGTGACGCTG
GTGGTGGAGGAGGAGGGCAAGGGGATAGCCGTCGAGGCTGACGATGACATCAGCGAGCCGGACGAGGATTCGATC
GCGGGACAGATGCATGCCCTGAAGACGGGACAGGCTCCGAGACGTCGGGCTGCGGACTCGGATGACGATGACTCG
GATGAGAGCGGGACGGATGAGGAGGCGGATGATACGAGCGATACGAACACGGATACTGAGGATGAGGCGTAG
Transcript >Ophcf2|07036
ATGAGCTCCGACTACTCCTACGATGACGAGGCCCAGTTCTTCCCGTACTTTATCCTGACGCTGACGGGCCTGGTC
ACGCTGCCGCTCACGTACAGCCTGGTACGGCCCAGCGGCGACGACGATGCGGTGGCGCCGCGGATCCAGACGGCA
TACCGCATCAAGGACGCTGCTGTTGTCGAGTCGTTGCGGTCGGCGCAGAAGCGAAAGCAGAGGAGGGTCAAGAGG
ACGCTGGCGGCTGTGGCTGGTTGGGCGCTTATGACTTTGATGGTTTATCTGGTGGTGGTGACGGAGCCGGCTACG
GTCAAGATCTGGAATCCGTACCACATCTTGGGCATCTCCGAGTCGGCGTCGGAGAAGCAGATCAAGTCGCATTAC
AAGCGGTTGTCGGTCAAGTTCCACCCCGACAAGGTCCGGCCCGATCCGGCCAAGAACCAGACGGCCGAATCGCTC
AACGACCACTATGTCGAGCTCACAAAGGCCTATCAGGCGCTGACGGACGAGGACGTGCGCAACAACTACATTCAG
TACGGACACCCGGACGGCAAGCAGAGCTTCAGCATTGGCATCGCGCTGCCCAAGTTCATCGTGTCCGATGGCAAC
GGCAAGTACCTGGTGCTGCTATACACGGGTCTTCTGGGCGTGCTGCTGCCGTATCTGGTCGGATCGTGGTGGTAT
GGCACCAAGCGGCGATCCAAGGAGGGTGTGCTGATGGAGAGCGCCAACAACCTGTTCCGGCAGTACGATGAGGGC
ATGGACGAGGCCGGCATCGTGGCGGCCCTGAGCGCGGGTAAGGAGTTCGAGCAGGTGCTGAGGCGCGACCAGGCC
GAGTCGGGTCTGTCCAAGATCGAGGCGCGCATCACGGCTGAGGGTGAGGGCTCGCCCCTGGCCGGCGGTCTGTCG
CCCAAGGACCGGCAGAAGCTCGAGGACCTGGAGAGCGGAGTGCGACGCAAGGCACTGGCCCTGCTGTGGGCATAT
CTGGGCCGGGTCGAGCTGGACGACGGGGTGCTGACGAGGGCCAAGTACGAGGTTGCTCCCATCGCTCGCACGCTG
AACCAGTCGTTTGCGGCCATCGCGCTGGCGTACGGAAACACGGGGCCGATCGCGGGTTCATTCTACGCCAACCAG
CACCTGATTCAGGCCATGCCTCCGAGAGCGTCGCCGCTGCTTCAGCTTCCGCACTTCACGCCGCGCGTGGTGATG
GCCGTCGAGGGAGGGGCCAAGACGCACATGACGGTACAGCAGTTCATGGACCTGCCCGACGGTCAGCGACGTCGA
CTTGCTGTTGGACGCGGCCTGCTTGCCGAGGCCGAATACCGAACCAGCATGGCGGTTGGACGACAGATGCCGTAC
CTCCGAGTGGCCAGGGCCTTCTTCAAGGTGACGGGCGAGCGCGTCATCATCCCGTCTTCGCTCGTCAGTCTCGTC
ATCAAGGGCCGCTTCATCCCGCCCGGTACGGATCGGGTGCCGCCCGTGGAAGAGGCCGATCTCGAGGACGTCGAC
CCTGCCGAGGACGACCTCGAGTCGCTCATGGGCCGCAAGACCAAGACGGTCAAGGGCGCCGACGGACGGCCCGTA
TCGGTAGAGGAGAAGACGGTGCTGCCACCGGTGACGTTTGCGCCGCACTACGCGCGAGAGCATCGTCCAAAGTGG
TACGCCTTCCTCAGCGACTCCAAGCAGGGCAAGATGGCGGTCCCTCCCTTTACCTTTGACCGCTTCGACGCGCCC
ATATTCGACGAGGATGGACGGCCTACGTTTGCCATGCAGACGCTCAAGGCGCAGTTCGCGGCTCCCCCTCAGGCG
GGACACTACACCTTTGTCATGCACGTCATCTGCGACTCGTACGTCGGCTTCGATACCAGGATGGAGGTGACGCTG
GTGGTGGAGGAGGAGGGCAAGGGGATAGCCGTCGAGGCTGACGATGACATCAGCGAGCCGGACGAGGATTCGATC
GCGGGACAGATGCATGCCCTGAAGACGGGACAGGCTCCGAGACGTCGGGCTGCGGACTCGGATGACGATGACTCG
GATGAGAGCGGGACGGATGAGGAGGCGGATGATACGAGCGATACGAACACGGATACTGAGGATGAGGCGTAG
Gene >Ophcf2|07036
ATGAGCTCCGACTACTCCTACGATGACGAGGCCCAGTTCTTCCCGTACTTTATCCTGACGCTGACGGGCCTGGTC
ACGCTGCCGCTCACGTACAGCCTGGTACGGCCCAGCGGCGACGACGATGCGGTGGCGCCGCGGATCCAGACGGCA
TACCGCATCAAGGACGCTGCTGTTGTCGAGTCGTTGCGGTCGGCGCAGAAGCGAAAGCAGAGGAGGGTCAAGAGG
ACGCTGGCGGCTGTGGCTGGTTGGGCGCTTATGACTTTGATGGTTTATCTGGTGGTGGTGACGGAGCCGGCTACG
GTCAAGATCTGGAATCCGTACCACATCTTGGGCATCTCCGAGGTATGGCGGTGTCTTTTCTTTTTTTCTCCGCCT
ATCATCATCTTTGAAAGATGTTCTGGCTGACGCGCAAGCAAAAATAGTCGGCGTCGGAGAAGCAGATCAAGTCGC
ATTACAAGCGGTTGTCGGTCAAGTTCCACCCCGACAAGGTCCGGCCCGATCCGGCCAAGAACCAGACGGCCGAAT
CGCTCAACGACCACTATGTCGAGCTCACAAAGGCCTATCAGGCGCTGACGGACGAGGACGTGCGCAACAACTACA
TTCAGTACGGACACCCGGACGGCAAGCAGAGCTTCAGCATTGGCATCGCGCTGCCCAAGTTCATCGTGTCCGATG
GCAACGGCAAGTACCTGGTGCTGCTATACACGGGTCTTCTGGGCGTGCTGCTGCCGTATCTGGTCGGATCGTGGT
GGTATGGCACCAAGCGGCGATCCAAGGAGGGTGTGCTGATGGAGAGCGCCAACAACCTGTTCCGGCAGTACGATG
AGGGCATGGACGAGGCCGGCATCGTGGCGGCCCTGAGCGCGGGTAAGGAGTTCGAGCAGGTGCTGAGGCGCGACC
AGGCCGAGTCGGGTCTGTCCAAGATCGAGGCGCGCATCACGGCTGAGGGTGAGGGCTCGCCCCTGGCCGGCGGTC
TGTCGCCCAAGGACCGGCAGAAGCTCGAGGACCTGGAGAGCGGAGTGCGACGCAAGGCACTGGCCCTGCTGTGGG
CATATCTGGGCCGGGTCGAGCTGGACGACGGGGTGCTGACGAGGGCCAAGTACGAGGTTGCTCCCATCGCTCGCA
CGCTGAACCAGTCGTTTGCGGCCATCGCGCTGGCGTACGGAAACACGGGGCCGATCGCGGGTTCATTCTACGCCA
ACCAGCACCTGATTCAGGCCATGCCTCCGAGAGCGTCGCCGCTGCTTCAGCTTCCGCACTTCACGCCGCGCGTGG
TGATGGCCGTCGAGGGAGGGGCCAAGACGCACATGACGGTACAGCAGTTCATGGACCTGCCCGACGGTCAGCGAC
GTCGACTTGCTGTTGGACGCGGCCTGCTTGCCGAGGCCGAATACCGAACCAGCATGGCGGTTGGACGACAGATGC
CGTACCTCCGAGTGGCCAGGGCCTTCTTCAAGGTGACGGGCGAGCGCGTCATCATCCCGTCTTCGCTCGTCAGTC
TCGTCATCAAGGGCCGCTTCATCCCGCCCGGTACGGATCGGGTGCCGCCCGTGGAAGAGGCCGATCTCGAGGACG
TCGACCCTGCCGAGGACGACCTCGAGTCGCTCATGGGCCGCAAGACCAAGACGGTCAAGGGCGCCGACGGACGGC
CCGTATCGGTAGAGGAGAAGACGGTGCTGCCACCGGTGACGTTTGCGCCGCACTACGCGCGAGAGCATCGTCCAA
AGTGGTACGCCTTCCTCAGCGACTCCAAGCAGGGCAAGATGGCGGTCCCTCCCTTTACCTTTGACCGCTTCGACG
CGCCCATATTCGACGAGGATGGACGGCCTACGTTTGCCATGCAGACGCTCAAGGCGCAGTTCGCGGCTCCCCCTC
AGGCGGGACACTACACCTTTGTCATGCACGTCATCTGCGACTCGTACGTCGGCTTCGATACCAGGATGGAGGTGA
CGCTGGTGGTGGAGGAGGAGGGCAAGGGGATAGCCGTCGAGGCTGACGATGACATCAGCGAGCCGGACGAGGGTG
AGTTGCCTCGGGAGTTGCCTCGGGAGTTTGCCTCAAGGGGGGGGGGGATCATGGCCAGAGATGATGCTGACTGGA
GGGATAGATTCGATCGCGGGACAGATGCATGCCCTGAAGACGGGACAGGCTCCGAGACGTCGGGCTGCGGACTCG
GATGACGATGACTCGGATGAGAGCGGGACGGATGAGGAGGCGGATGATACGAGCGATACGAACACGGATACTGAG
GATGAGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail