Protein ID | Ophcf2|07036 |
Gene name | |
Location | scaffold_09:428452..430714 |
Strand | - |
Gene length (bp) | 2262 |
Transcript length (bp) | 2097 |
Coding sequence length (bp) | 2097 |
Protein length (aa) | 699 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00226 | DnaJ | DnaJ domain | 4.4E-15 | 105 | 173 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 33 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 35 | 22 |
2 | 76 | 95 | 19 |
3 | 203 | 225 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|07036 MSSDYSYDDEAQFFPYFILTLTGLVTLPLTYSLVRPSGDDDAVAPRIQTAYRIKDAAVVESLRSAQKRKQRRVKR TLAAVAGWALMTLMVYLVVVTEPATVKIWNPYHILGISESASEKQIKSHYKRLSVKFHPDKVRPDPAKNQTAESL NDHYVELTKAYQALTDEDVRNNYIQYGHPDGKQSFSIGIALPKFIVSDGNGKYLVLLYTGLLGVLLPYLVGSWWY GTKRRSKEGVLMESANNLFRQYDEGMDEAGIVAALSAGKEFEQVLRRDQAESGLSKIEARITAEGEGSPLAGGLS PKDRQKLEDLESGVRRKALALLWAYLGRVELDDGVLTRAKYEVAPIARTLNQSFAAIALAYGNTGPIAGSFYANQ HLIQAMPPRASPLLQLPHFTPRVVMAVEGGAKTHMTVQQFMDLPDGQRRRLAVGRGLLAEAEYRTSMAVGRQMPY LRVARAFFKVTGERVIIPSSLVSLVIKGRFIPPGTDRVPPVEEADLEDVDPAEDDLESLMGRKTKTVKGADGRPV SVEEKTVLPPVTFAPHYAREHRPKWYAFLSDSKQGKMAVPPFTFDRFDAPIFDEDGRPTFAMQTLKAQFAAPPQA GHYTFVMHVICDSYVGFDTRMEVTLVVEEEGKGIAVEADDDISEPDEDSIAGQMHALKTGQAPRRRAADSDDDDS DESGTDEEADDTSDTNTDTEDEA* |
Coding | >Ophcf2|07036 ATGAGCTCCGACTACTCCTACGATGACGAGGCCCAGTTCTTCCCGTACTTTATCCTGACGCTGACGGGCCTGGTC ACGCTGCCGCTCACGTACAGCCTGGTACGGCCCAGCGGCGACGACGATGCGGTGGCGCCGCGGATCCAGACGGCA TACCGCATCAAGGACGCTGCTGTTGTCGAGTCGTTGCGGTCGGCGCAGAAGCGAAAGCAGAGGAGGGTCAAGAGG ACGCTGGCGGCTGTGGCTGGTTGGGCGCTTATGACTTTGATGGTTTATCTGGTGGTGGTGACGGAGCCGGCTACG GTCAAGATCTGGAATCCGTACCACATCTTGGGCATCTCCGAGTCGGCGTCGGAGAAGCAGATCAAGTCGCATTAC AAGCGGTTGTCGGTCAAGTTCCACCCCGACAAGGTCCGGCCCGATCCGGCCAAGAACCAGACGGCCGAATCGCTC AACGACCACTATGTCGAGCTCACAAAGGCCTATCAGGCGCTGACGGACGAGGACGTGCGCAACAACTACATTCAG TACGGACACCCGGACGGCAAGCAGAGCTTCAGCATTGGCATCGCGCTGCCCAAGTTCATCGTGTCCGATGGCAAC GGCAAGTACCTGGTGCTGCTATACACGGGTCTTCTGGGCGTGCTGCTGCCGTATCTGGTCGGATCGTGGTGGTAT GGCACCAAGCGGCGATCCAAGGAGGGTGTGCTGATGGAGAGCGCCAACAACCTGTTCCGGCAGTACGATGAGGGC ATGGACGAGGCCGGCATCGTGGCGGCCCTGAGCGCGGGTAAGGAGTTCGAGCAGGTGCTGAGGCGCGACCAGGCC GAGTCGGGTCTGTCCAAGATCGAGGCGCGCATCACGGCTGAGGGTGAGGGCTCGCCCCTGGCCGGCGGTCTGTCG CCCAAGGACCGGCAGAAGCTCGAGGACCTGGAGAGCGGAGTGCGACGCAAGGCACTGGCCCTGCTGTGGGCATAT CTGGGCCGGGTCGAGCTGGACGACGGGGTGCTGACGAGGGCCAAGTACGAGGTTGCTCCCATCGCTCGCACGCTG AACCAGTCGTTTGCGGCCATCGCGCTGGCGTACGGAAACACGGGGCCGATCGCGGGTTCATTCTACGCCAACCAG CACCTGATTCAGGCCATGCCTCCGAGAGCGTCGCCGCTGCTTCAGCTTCCGCACTTCACGCCGCGCGTGGTGATG GCCGTCGAGGGAGGGGCCAAGACGCACATGACGGTACAGCAGTTCATGGACCTGCCCGACGGTCAGCGACGTCGA CTTGCTGTTGGACGCGGCCTGCTTGCCGAGGCCGAATACCGAACCAGCATGGCGGTTGGACGACAGATGCCGTAC CTCCGAGTGGCCAGGGCCTTCTTCAAGGTGACGGGCGAGCGCGTCATCATCCCGTCTTCGCTCGTCAGTCTCGTC ATCAAGGGCCGCTTCATCCCGCCCGGTACGGATCGGGTGCCGCCCGTGGAAGAGGCCGATCTCGAGGACGTCGAC CCTGCCGAGGACGACCTCGAGTCGCTCATGGGCCGCAAGACCAAGACGGTCAAGGGCGCCGACGGACGGCCCGTA TCGGTAGAGGAGAAGACGGTGCTGCCACCGGTGACGTTTGCGCCGCACTACGCGCGAGAGCATCGTCCAAAGTGG TACGCCTTCCTCAGCGACTCCAAGCAGGGCAAGATGGCGGTCCCTCCCTTTACCTTTGACCGCTTCGACGCGCCC ATATTCGACGAGGATGGACGGCCTACGTTTGCCATGCAGACGCTCAAGGCGCAGTTCGCGGCTCCCCCTCAGGCG GGACACTACACCTTTGTCATGCACGTCATCTGCGACTCGTACGTCGGCTTCGATACCAGGATGGAGGTGACGCTG GTGGTGGAGGAGGAGGGCAAGGGGATAGCCGTCGAGGCTGACGATGACATCAGCGAGCCGGACGAGGATTCGATC GCGGGACAGATGCATGCCCTGAAGACGGGACAGGCTCCGAGACGTCGGGCTGCGGACTCGGATGACGATGACTCG GATGAGAGCGGGACGGATGAGGAGGCGGATGATACGAGCGATACGAACACGGATACTGAGGATGAGGCGTAG |
Transcript | >Ophcf2|07036 ATGAGCTCCGACTACTCCTACGATGACGAGGCCCAGTTCTTCCCGTACTTTATCCTGACGCTGACGGGCCTGGTC ACGCTGCCGCTCACGTACAGCCTGGTACGGCCCAGCGGCGACGACGATGCGGTGGCGCCGCGGATCCAGACGGCA TACCGCATCAAGGACGCTGCTGTTGTCGAGTCGTTGCGGTCGGCGCAGAAGCGAAAGCAGAGGAGGGTCAAGAGG ACGCTGGCGGCTGTGGCTGGTTGGGCGCTTATGACTTTGATGGTTTATCTGGTGGTGGTGACGGAGCCGGCTACG GTCAAGATCTGGAATCCGTACCACATCTTGGGCATCTCCGAGTCGGCGTCGGAGAAGCAGATCAAGTCGCATTAC AAGCGGTTGTCGGTCAAGTTCCACCCCGACAAGGTCCGGCCCGATCCGGCCAAGAACCAGACGGCCGAATCGCTC AACGACCACTATGTCGAGCTCACAAAGGCCTATCAGGCGCTGACGGACGAGGACGTGCGCAACAACTACATTCAG TACGGACACCCGGACGGCAAGCAGAGCTTCAGCATTGGCATCGCGCTGCCCAAGTTCATCGTGTCCGATGGCAAC GGCAAGTACCTGGTGCTGCTATACACGGGTCTTCTGGGCGTGCTGCTGCCGTATCTGGTCGGATCGTGGTGGTAT GGCACCAAGCGGCGATCCAAGGAGGGTGTGCTGATGGAGAGCGCCAACAACCTGTTCCGGCAGTACGATGAGGGC ATGGACGAGGCCGGCATCGTGGCGGCCCTGAGCGCGGGTAAGGAGTTCGAGCAGGTGCTGAGGCGCGACCAGGCC GAGTCGGGTCTGTCCAAGATCGAGGCGCGCATCACGGCTGAGGGTGAGGGCTCGCCCCTGGCCGGCGGTCTGTCG CCCAAGGACCGGCAGAAGCTCGAGGACCTGGAGAGCGGAGTGCGACGCAAGGCACTGGCCCTGCTGTGGGCATAT CTGGGCCGGGTCGAGCTGGACGACGGGGTGCTGACGAGGGCCAAGTACGAGGTTGCTCCCATCGCTCGCACGCTG AACCAGTCGTTTGCGGCCATCGCGCTGGCGTACGGAAACACGGGGCCGATCGCGGGTTCATTCTACGCCAACCAG CACCTGATTCAGGCCATGCCTCCGAGAGCGTCGCCGCTGCTTCAGCTTCCGCACTTCACGCCGCGCGTGGTGATG GCCGTCGAGGGAGGGGCCAAGACGCACATGACGGTACAGCAGTTCATGGACCTGCCCGACGGTCAGCGACGTCGA CTTGCTGTTGGACGCGGCCTGCTTGCCGAGGCCGAATACCGAACCAGCATGGCGGTTGGACGACAGATGCCGTAC CTCCGAGTGGCCAGGGCCTTCTTCAAGGTGACGGGCGAGCGCGTCATCATCCCGTCTTCGCTCGTCAGTCTCGTC ATCAAGGGCCGCTTCATCCCGCCCGGTACGGATCGGGTGCCGCCCGTGGAAGAGGCCGATCTCGAGGACGTCGAC CCTGCCGAGGACGACCTCGAGTCGCTCATGGGCCGCAAGACCAAGACGGTCAAGGGCGCCGACGGACGGCCCGTA TCGGTAGAGGAGAAGACGGTGCTGCCACCGGTGACGTTTGCGCCGCACTACGCGCGAGAGCATCGTCCAAAGTGG TACGCCTTCCTCAGCGACTCCAAGCAGGGCAAGATGGCGGTCCCTCCCTTTACCTTTGACCGCTTCGACGCGCCC ATATTCGACGAGGATGGACGGCCTACGTTTGCCATGCAGACGCTCAAGGCGCAGTTCGCGGCTCCCCCTCAGGCG GGACACTACACCTTTGTCATGCACGTCATCTGCGACTCGTACGTCGGCTTCGATACCAGGATGGAGGTGACGCTG GTGGTGGAGGAGGAGGGCAAGGGGATAGCCGTCGAGGCTGACGATGACATCAGCGAGCCGGACGAGGATTCGATC GCGGGACAGATGCATGCCCTGAAGACGGGACAGGCTCCGAGACGTCGGGCTGCGGACTCGGATGACGATGACTCG GATGAGAGCGGGACGGATGAGGAGGCGGATGATACGAGCGATACGAACACGGATACTGAGGATGAGGCGTAG |
Gene | >Ophcf2|07036 ATGAGCTCCGACTACTCCTACGATGACGAGGCCCAGTTCTTCCCGTACTTTATCCTGACGCTGACGGGCCTGGTC ACGCTGCCGCTCACGTACAGCCTGGTACGGCCCAGCGGCGACGACGATGCGGTGGCGCCGCGGATCCAGACGGCA TACCGCATCAAGGACGCTGCTGTTGTCGAGTCGTTGCGGTCGGCGCAGAAGCGAAAGCAGAGGAGGGTCAAGAGG ACGCTGGCGGCTGTGGCTGGTTGGGCGCTTATGACTTTGATGGTTTATCTGGTGGTGGTGACGGAGCCGGCTACG GTCAAGATCTGGAATCCGTACCACATCTTGGGCATCTCCGAGGTATGGCGGTGTCTTTTCTTTTTTTCTCCGCCT ATCATCATCTTTGAAAGATGTTCTGGCTGACGCGCAAGCAAAAATAGTCGGCGTCGGAGAAGCAGATCAAGTCGC ATTACAAGCGGTTGTCGGTCAAGTTCCACCCCGACAAGGTCCGGCCCGATCCGGCCAAGAACCAGACGGCCGAAT CGCTCAACGACCACTATGTCGAGCTCACAAAGGCCTATCAGGCGCTGACGGACGAGGACGTGCGCAACAACTACA TTCAGTACGGACACCCGGACGGCAAGCAGAGCTTCAGCATTGGCATCGCGCTGCCCAAGTTCATCGTGTCCGATG GCAACGGCAAGTACCTGGTGCTGCTATACACGGGTCTTCTGGGCGTGCTGCTGCCGTATCTGGTCGGATCGTGGT GGTATGGCACCAAGCGGCGATCCAAGGAGGGTGTGCTGATGGAGAGCGCCAACAACCTGTTCCGGCAGTACGATG AGGGCATGGACGAGGCCGGCATCGTGGCGGCCCTGAGCGCGGGTAAGGAGTTCGAGCAGGTGCTGAGGCGCGACC AGGCCGAGTCGGGTCTGTCCAAGATCGAGGCGCGCATCACGGCTGAGGGTGAGGGCTCGCCCCTGGCCGGCGGTC TGTCGCCCAAGGACCGGCAGAAGCTCGAGGACCTGGAGAGCGGAGTGCGACGCAAGGCACTGGCCCTGCTGTGGG CATATCTGGGCCGGGTCGAGCTGGACGACGGGGTGCTGACGAGGGCCAAGTACGAGGTTGCTCCCATCGCTCGCA CGCTGAACCAGTCGTTTGCGGCCATCGCGCTGGCGTACGGAAACACGGGGCCGATCGCGGGTTCATTCTACGCCA ACCAGCACCTGATTCAGGCCATGCCTCCGAGAGCGTCGCCGCTGCTTCAGCTTCCGCACTTCACGCCGCGCGTGG TGATGGCCGTCGAGGGAGGGGCCAAGACGCACATGACGGTACAGCAGTTCATGGACCTGCCCGACGGTCAGCGAC GTCGACTTGCTGTTGGACGCGGCCTGCTTGCCGAGGCCGAATACCGAACCAGCATGGCGGTTGGACGACAGATGC CGTACCTCCGAGTGGCCAGGGCCTTCTTCAAGGTGACGGGCGAGCGCGTCATCATCCCGTCTTCGCTCGTCAGTC TCGTCATCAAGGGCCGCTTCATCCCGCCCGGTACGGATCGGGTGCCGCCCGTGGAAGAGGCCGATCTCGAGGACG TCGACCCTGCCGAGGACGACCTCGAGTCGCTCATGGGCCGCAAGACCAAGACGGTCAAGGGCGCCGACGGACGGC CCGTATCGGTAGAGGAGAAGACGGTGCTGCCACCGGTGACGTTTGCGCCGCACTACGCGCGAGAGCATCGTCCAA AGTGGTACGCCTTCCTCAGCGACTCCAAGCAGGGCAAGATGGCGGTCCCTCCCTTTACCTTTGACCGCTTCGACG CGCCCATATTCGACGAGGATGGACGGCCTACGTTTGCCATGCAGACGCTCAAGGCGCAGTTCGCGGCTCCCCCTC AGGCGGGACACTACACCTTTGTCATGCACGTCATCTGCGACTCGTACGTCGGCTTCGATACCAGGATGGAGGTGA CGCTGGTGGTGGAGGAGGAGGGCAAGGGGATAGCCGTCGAGGCTGACGATGACATCAGCGAGCCGGACGAGGGTG AGTTGCCTCGGGAGTTGCCTCGGGAGTTTGCCTCAAGGGGGGGGGGGATCATGGCCAGAGATGATGCTGACTGGA GGGATAGATTCGATCGCGGGACAGATGCATGCCCTGAAGACGGGACAGGCTCCGAGACGTCGGGCTGCGGACTCG GATGACGATGACTCGGATGAGAGCGGGACGGATGAGGAGGCGGATGATACGAGCGATACGAACACGGATACTGAG GATGAGGCGTAG |