Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07022
Gene name
Locationscaffold_09:395168..396968
Strand-
Gene length (bp)1800
Transcript length (bp)1662
Coding sequence length (bp)1662
Protein length (aa) 554

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01416 PseudoU_synth_1 tRNA pseudouridine synthase 2.3E-08 344 449

GO

GO Term Description Terminal node
GO:0009451 RNA modification Yes
GO:0001522 pseudouridine synthesis Yes
GO:0003723 RNA binding Yes
GO:0009982 pseudouridine synthase activity Yes
GO:0003824 catalytic activity No
GO:0097159 organic cyclic compound binding No
GO:0044237 cellular metabolic process No
GO:0009987 cellular process No
GO:0003676 nucleic acid binding No
GO:1901363 heterocyclic compound binding No
GO:0008152 metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0005488 binding No
GO:0043170 macromolecule metabolic process No
GO:0016866 intramolecular transferase activity No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0044238 primary metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0003674 molecular_function No
GO:0090304 nucleic acid metabolic process No
GO:0043412 macromolecule modification No
GO:0008150 biological_process No
GO:0016853 isomerase activity No
GO:0034641 cellular nitrogen compound metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.2647 0.7552 0.5226 0.0141 0.4608 0.0014 0.0995 0.009 0.0442 0.0081

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup3892
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4209
Ophiocordyceps australis map64 (Brazil) OphauB2|212
Ophiocordyceps camponoti-floridani Ophcf2|07022 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|5941
Ophiocordyceps kimflemingae Ophio5|6694
Ophiocordyceps subramaniannii Hirsu2|7744

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07022
MASVDETPPSPVEQNKPDAAHDDADDAGRPQDKRSKQQQKKRKKQEEWREFKRRKVDGVDSKNPFSKEEIAAEAR
RPKRKVAVMIGYAGTGYKGMQVNGDEPTIERDLFRAFIDAGAISKANADDPRKSSLARCARTDKGVHAAGNVISL
KLIIEDDAVVANINAHLPDQIRVWGIQRTNNTFNCYQYCDSRWYEYLLPSYCLLPPHPHSYLGRKLAELAAEHGA
ADELRTSNADLADFWSRVEDQQVRPILAALDPDVRAAVLERAHVTEAEMEETDTGADAQTTVPNETGADAPRPPQ
SVKPKNNRDLGPVDYALRDIKAAYVTAKRRYRVSPDRLGRLQSALDRFVGTNNFHNYTVQKPFGDASARRHIKSF
VANPEPILIGGTEWLSLKVHGQSFMMHQIRKMVGMATLLTRCCTPLDRINDSYADRKLAIPKAPGLGLLLERPVF
ENYNRRARETLDRPEIDFDKYERELQAFKDKHIYTRIFEVEEKENTFHAFFNQIDQFRSNHFLWLTAGGLSAAEI
PQNVGGEVQEDVDKQLGDEDEDPEGGEG*
Coding >Ophcf2|07022
ATGGCGTCCGTTGATGAGACTCCTCCGTCTCCCGTGGAGCAAAACAAACCAGACGCCGCCCATGATGACGCCGAC
GACGCAGGACGGCCCCAAGACAAGCGGAGCAAGCAACAGCAGAAGAAGCGCAAGAAGCAGGAAGAGTGGCGCGAG
TTTAAGCGTCGCAAGGTAGACGGCGTCGACAGCAAGAACCCCTTCTCCAAGGAGGAGATTGCCGCCGAGGCTCGT
CGTCCGAAGCGCAAGGTGGCCGTCATGATCGGTTACGCGGGAACCGGCTACAAGGGCATGCAGGTCAATGGCGAC
GAGCCCACTATCGAGCGTGACCTGTTCAGGGCCTTTATCGACGCCGGTGCCATCTCAAAGGCCAACGCCGACGAC
CCGCGCAAGTCGAGTCTGGCCCGTTGTGCTCGCACCGACAAGGGCGTCCATGCGGCCGGCAACGTAATCAGCCTC
AAGCTCATCATCGAGGACGACGCCGTCGTGGCCAATATCAATGCTCACCTGCCCGACCAGATCCGCGTCTGGGGC
ATTCAGCGGACCAACAACACCTTCAACTGCTACCAGTACTGCGACTCGCGCTGGTACGAGTATCTGCTGCCCAGC
TACTGCCTGCTGCCTCCGCATCCGCACTCCTATTTGGGTCGCAAGTTGGCCGAGCTGGCGGCTGAGCACGGCGCG
GCTGATGAGCTGCGGACCAGCAACGCCGACCTCGCCGACTTCTGGTCTCGAGTCGAGGACCAGCAGGTCCGTCCC
ATCCTGGCTGCTCTCGATCCGGATGTTCGCGCCGCCGTGCTCGAGCGCGCACACGTCACCGAGGCCGAAATGGAA
GAGACCGATACCGGAGCGGATGCTCAGACGACCGTCCCCAACGAGACCGGAGCCGACGCACCTCGGCCGCCGCAA
AGCGTCAAGCCCAAGAACAATCGCGATCTCGGCCCCGTCGACTATGCCCTCCGCGACATCAAAGCCGCCTACGTG
ACGGCCAAGCGCCGTTATCGCGTGAGCCCCGACCGCCTAGGCCGTCTACAATCGGCCTTGGACCGCTTCGTGGGA
ACCAACAACTTCCACAACTACACGGTTCAAAAGCCCTTTGGCGACGCCTCGGCTCGCCGCCACATAAAGTCCTTC
GTCGCCAACCCGGAGCCCATCCTCATCGGCGGCACGGAGTGGCTCTCGCTCAAGGTGCACGGCCAGAGCTTCATG
ATGCACCAGATCCGCAAGATGGTCGGCATGGCCACGCTGCTGACCCGGTGCTGCACGCCCCTGGACCGCATCAAC
GACAGCTACGCCGATCGCAAGCTGGCCATCCCCAAGGCTCCCGGCTTGGGGCTCCTCCTCGAGCGGCCCGTGTTT
GAAAACTACAACCGACGCGCTCGCGAGACGCTGGACCGGCCCGAGATTGACTTTGACAAGTACGAAAGGGAGCTT
CAGGCCTTTAAGGATAAACATATCTATACCCGCATCTTTGAGGTGGAAGAAAAGGAGAATACCTTCCACGCCTTC
TTCAACCAGATTGACCAGTTCAGGTCGAATCACTTCCTCTGGCTGACGGCTGGCGGCTTAAGCGCGGCTGAGATT
CCTCAGAACGTGGGCGGCGAGGTGCAGGAGGATGTGGACAAGCAGCTGGGCGACGAGGATGAGGATCCTGAGGGA
GGCGAGGGTTAG
Transcript >Ophcf2|07022
ATGGCGTCCGTTGATGAGACTCCTCCGTCTCCCGTGGAGCAAAACAAACCAGACGCCGCCCATGATGACGCCGAC
GACGCAGGACGGCCCCAAGACAAGCGGAGCAAGCAACAGCAGAAGAAGCGCAAGAAGCAGGAAGAGTGGCGCGAG
TTTAAGCGTCGCAAGGTAGACGGCGTCGACAGCAAGAACCCCTTCTCCAAGGAGGAGATTGCCGCCGAGGCTCGT
CGTCCGAAGCGCAAGGTGGCCGTCATGATCGGTTACGCGGGAACCGGCTACAAGGGCATGCAGGTCAATGGCGAC
GAGCCCACTATCGAGCGTGACCTGTTCAGGGCCTTTATCGACGCCGGTGCCATCTCAAAGGCCAACGCCGACGAC
CCGCGCAAGTCGAGTCTGGCCCGTTGTGCTCGCACCGACAAGGGCGTCCATGCGGCCGGCAACGTAATCAGCCTC
AAGCTCATCATCGAGGACGACGCCGTCGTGGCCAATATCAATGCTCACCTGCCCGACCAGATCCGCGTCTGGGGC
ATTCAGCGGACCAACAACACCTTCAACTGCTACCAGTACTGCGACTCGCGCTGGTACGAGTATCTGCTGCCCAGC
TACTGCCTGCTGCCTCCGCATCCGCACTCCTATTTGGGTCGCAAGTTGGCCGAGCTGGCGGCTGAGCACGGCGCG
GCTGATGAGCTGCGGACCAGCAACGCCGACCTCGCCGACTTCTGGTCTCGAGTCGAGGACCAGCAGGTCCGTCCC
ATCCTGGCTGCTCTCGATCCGGATGTTCGCGCCGCCGTGCTCGAGCGCGCACACGTCACCGAGGCCGAAATGGAA
GAGACCGATACCGGAGCGGATGCTCAGACGACCGTCCCCAACGAGACCGGAGCCGACGCACCTCGGCCGCCGCAA
AGCGTCAAGCCCAAGAACAATCGCGATCTCGGCCCCGTCGACTATGCCCTCCGCGACATCAAAGCCGCCTACGTG
ACGGCCAAGCGCCGTTATCGCGTGAGCCCCGACCGCCTAGGCCGTCTACAATCGGCCTTGGACCGCTTCGTGGGA
ACCAACAACTTCCACAACTACACGGTTCAAAAGCCCTTTGGCGACGCCTCGGCTCGCCGCCACATAAAGTCCTTC
GTCGCCAACCCGGAGCCCATCCTCATCGGCGGCACGGAGTGGCTCTCGCTCAAGGTGCACGGCCAGAGCTTCATG
ATGCACCAGATCCGCAAGATGGTCGGCATGGCCACGCTGCTGACCCGGTGCTGCACGCCCCTGGACCGCATCAAC
GACAGCTACGCCGATCGCAAGCTGGCCATCCCCAAGGCTCCCGGCTTGGGGCTCCTCCTCGAGCGGCCCGTGTTT
GAAAACTACAACCGACGCGCTCGCGAGACGCTGGACCGGCCCGAGATTGACTTTGACAAGTACGAAAGGGAGCTT
CAGGCCTTTAAGGATAAACATATCTATACCCGCATCTTTGAGGTGGAAGAAAAGGAGAATACCTTCCACGCCTTC
TTCAACCAGATTGACCAGTTCAGGTCGAATCACTTCCTCTGGCTGACGGCTGGCGGCTTAAGCGCGGCTGAGATT
CCTCAGAACGTGGGCGGCGAGGTGCAGGAGGATGTGGACAAGCAGCTGGGCGACGAGGATGAGGATCCTGAGGGA
GGCGAGGGTTAG
Gene >Ophcf2|07022
ATGGCGTCCGTTGATGAGACTCCTCCGTCTCCCGTGGAGCAAAACAAACCAGACGCCGCCCATGATGACGCCGAC
GACGCAGGACGGCCCCAAGACAAGCGGAGGTATGGCTCCCCTCAAGCAAGACGATACGCAGTCCACAACTATGCT
GACAACTCGACGAGCCAGCAAGCAACAGCAGAAGAAGCGCAAGAAGCAGGAAGAGTGGCGCGAGTTTAAGCGTCG
CAAGGTAGACGGCGTCGACAGCAAGAACCCCTTCTCCAAGGAGGAGATTGCCGCCGAGGCTCGTCGTCCGAAGCG
CAAGGTGGCCGTCATGATCGGTTACGCGGGAACCGGCTACAAGGGCATGCAGGTCAATGGCGACGAGCCCACTAT
CGAGCGTGACCTGTTCAGGGCCTTTATCGACGCCGGTGCCATCTCAAAGGCCAACGCCGACGACCCGCGCAAGTC
GAGTCTGGCCCGTTGTGCTCGCACCGACAAGGGCGTCCATGCGGCCGGCAACGTAATCAGCCTCAAGCTCATCAT
CGAGGACGACGCCGTCGTGGCCAATATCAATGCTCACCTGCCCGACCAGATCCGCGTCTGGGGCATTCAGCGGAC
CAACAACACCTTCAACTGCTACCAGTACTGCGACTCGCGCTGGTACGAGTATCTGCTGCCCAGCTACTGCCTGCT
GCCTCCGCATCCGCACTCCTATTTGGGTCGCAAGTTGGCCGAGCTGGCGGCTGAGCACGGCGCGGCTGATGAGCT
GCGGACCAGCAACGCCGACCTCGCCGACTTCTGGTCTCGAGTCGAGGACCAGCAGGTCCGTCCCATCCTGGCTGC
TCTCGATCCGGATGTTCGCGCCGCCGTGCTCGAGCGCGCACACGTCACCGAGGCCGAAATGGAAGAGACCGATAC
CGGAGCGGATGCTCAGACGACCGTCCCCAACGAGACCGGAGCCGACGCACCTCGGCCGCCGCAAAGCGTCAAGCC
CAAGAACAATCGCGATCTCGGCCCCGTCGACTATGCCCTCCGCGACATCAAAGCCGCCTACGTGACGGCCAAGCG
CCGTTATCGCGTGAGCCCCGACCGCCTAGGCCGTCTACAATCGGCCTTGGACCGCTTCGTGGGAACCAACAACTT
CCACAACTACACGGTTCAAAAGCCCTTTGGCGACGCCTCGGCTCGCCGCCACATAAAGTCCTTCGTCGCCAACCC
GGAGCCCATCCTCATCGGCGGCACGGAGTGGCTCTCGCTCAAGGTGCACGGCCAGAGCTTCATGATGCACCAGAT
CCGCAAGATGGTCGGCATGGCCACGCTGCTGACCCGGTGCTGCACGCCCCTGGACCGCATCAACGACAGCTACGC
CGATCGCAAGCTGGCCATCCCCAAGGCTCCCGGCTTGGGGCTCCTCCTCGAGCGGCCCGTGTTTGAAAACTACAA
CCGACGCGCTCGCGAGACGCTGGACCGGCCCGAGATTGACTTTGACAAGTACGAAAGGGAGCTTCAGGCCTTTAA
GGATAAACATATCTATACCCGCATCTTTGAGGTGGAAGAAAAGGAGAATACGTGAGTTGAAGCTGGCATCACCCA
TCTCCAGTCCTTGTCCTGTCCTTGTCGTGGCTGACAGACGCCCGTTTCAGCTTCCACGCCTTCTTCAACCAGATT
GACCAGTTCAGGTCGAATCACTTCCTCTGGCTGACGGCTGGCGGCTTAAGCGCGGCTGAGATTCCTCAGAACGTG
GGCGGCGAGGTGCAGGAGGATGTGGACAAGCAGCTGGGCGACGAGGATGAGGATCCTGAGGGAGGCGAGGGTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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