© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophcf2|07020 |
| Gene name | |
| Location | scaffold_09:392874..393720 |
| Strand | + |
| Gene length (bp) | 846 |
| Transcript length (bp) | 846 |
| Coding sequence length (bp) | 846 |
| Protein length (aa) | 282 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 5.4E-15 | 37 | 216 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005615 | extracellular space | Yes |
| GO:0090729 | toxin activity | Yes |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1742 | 0.1144 | 0.8723 | 0.1784 | 0.1132 | 0.0656 | 0.3155 | 0.2717 | 0.1255 | 0.0169 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 18 | 0.999734 |
| Orthofinder run ID | 4 |
| Orthogroup | 8254 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|07020 (this protein) |
| Ophiocordyceps camponoti-rufipedis | Ophun1|5274 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|07020 MLLLPALLILLLPQKSHGSVDQGSKTPPPRPPPTIVYVNDGREYHEIRAEGGFRPASQRPSPHGYTLLSIVEEAA DIHTKAVDTAYVLTSATFGGAARRPGKFVYVVHATSNMIDMARSLYNQSVYDAEFPAFGGIRWTQIIGWVDVGTQ FHWMKPGEEDIFNGVMVHLLRRPKVYWSAGYHPDNYQGQTASGPRPELAGYRDNHAAWKERPWRDIPVSTRHDPE LLARNFMASLVLGTTDRWMKGFPILEQLSSIADSESGDIQLKHSWRALRWRSLITG* |
| Coding | >Ophcf2|07020 ATGCTCCTCCTCCCCGCTCTCCTCATCCTTCTCCTCCCACAGAAGAGTCACGGTTCCGTCGATCAAGGCAGCAAA ACTCCTCCGCCCCGCCCCCCACCGACAATAGTCTACGTCAACGACGGCCGTGAATACCACGAGATCAGAGCAGAG GGAGGCTTCCGGCCCGCAAGCCAGAGACCATCCCCTCATGGCTACACGCTCCTCAGCATAGTCGAAGAGGCAGCC GACATCCACACCAAGGCCGTCGACACGGCTTACGTCTTGACCTCGGCTACTTTCGGGGGGGCTGCCAGACGGCCG GGGAAGTTCGTCTACGTCGTCCACGCGACGAGCAACATGATCGATATGGCGCGCTCGCTCTACAACCAAAGCGTC TACGACGCCGAGTTCCCAGCATTCGGGGGCATCCGCTGGACCCAGATCATCGGCTGGGTAGACGTCGGCACGCAA TTCCACTGGATGAAGCCCGGAGAAGAAGACATATTCAACGGCGTCATGGTACACTTGCTGCGCCGTCCAAAGGTC TACTGGAGCGCCGGCTACCACCCCGACAACTACCAGGGCCAGACGGCCAGCGGTCCGCGTCCTGAACTCGCAGGT TACCGAGACAACCATGCAGCCTGGAAGGAAAGGCCGTGGCGCGATATCCCCGTGTCTACTCGCCATGATCCCGAG CTCCTGGCGAGGAACTTCATGGCGAGTCTGGTGCTGGGCACTACTGATCGCTGGATGAAGGGCTTTCCGATTCTT GAGCAGTTGTCGTCCATAGCGGACAGCGAGAGTGGTGATATCCAGCTGAAGCACTCATGGCGAGCTCTTCGCTGG AGAAGTCTCATCACTGGATGA |
| Transcript | >Ophcf2|07020 ATGCTCCTCCTCCCCGCTCTCCTCATCCTTCTCCTCCCACAGAAGAGTCACGGTTCCGTCGATCAAGGCAGCAAA ACTCCTCCGCCCCGCCCCCCACCGACAATAGTCTACGTCAACGACGGCCGTGAATACCACGAGATCAGAGCAGAG GGAGGCTTCCGGCCCGCAAGCCAGAGACCATCCCCTCATGGCTACACGCTCCTCAGCATAGTCGAAGAGGCAGCC GACATCCACACCAAGGCCGTCGACACGGCTTACGTCTTGACCTCGGCTACTTTCGGGGGGGCTGCCAGACGGCCG GGGAAGTTCGTCTACGTCGTCCACGCGACGAGCAACATGATCGATATGGCGCGCTCGCTCTACAACCAAAGCGTC TACGACGCCGAGTTCCCAGCATTCGGGGGCATCCGCTGGACCCAGATCATCGGCTGGGTAGACGTCGGCACGCAA TTCCACTGGATGAAGCCCGGAGAAGAAGACATATTCAACGGCGTCATGGTACACTTGCTGCGCCGTCCAAAGGTC TACTGGAGCGCCGGCTACCACCCCGACAACTACCAGGGCCAGACGGCCAGCGGTCCGCGTCCTGAACTCGCAGGT TACCGAGACAACCATGCAGCCTGGAAGGAAAGGCCGTGGCGCGATATCCCCGTGTCTACTCGCCATGATCCCGAG CTCCTGGCGAGGAACTTCATGGCGAGTCTGGTGCTGGGCACTACTGATCGCTGGATGAAGGGCTTTCCGATTCTT GAGCAGTTGTCGTCCATAGCGGACAGCGAGAGTGGTGATATCCAGCTGAAGCACTCATGGCGAGCTCTTCGCTGG AGAAGTCTCATCACTGGATGA |
| Gene | >Ophcf2|07020 ATGCTCCTCCTCCCCGCTCTCCTCATCCTTCTCCTCCCACAGAAGAGTCACGGTTCCGTCGATCAAGGCAGCAAA ACTCCTCCGCCCCGCCCCCCACCGACAATAGTCTACGTCAACGACGGCCGTGAATACCACGAGATCAGAGCAGAG GGAGGCTTCCGGCCCGCAAGCCAGAGACCATCCCCTCATGGCTACACGCTCCTCAGCATAGTCGAAGAGGCAGCC GACATCCACACCAAGGCCGTCGACACGGCTTACGTCTTGACCTCGGCTACTTTCGGGGGGGCTGCCAGACGGCCG GGGAAGTTCGTCTACGTCGTCCACGCGACGAGCAACATGATCGATATGGCGCGCTCGCTCTACAACCAAAGCGTC TACGACGCCGAGTTCCCAGCATTCGGGGGCATCCGCTGGACCCAGATCATCGGCTGGGTAGACGTCGGCACGCAA TTCCACTGGATGAAGCCCGGAGAAGAAGACATATTCAACGGCGTCATGGTACACTTGCTGCGCCGTCCAAAGGTC TACTGGAGCGCCGGCTACCACCCCGACAACTACCAGGGCCAGACGGCCAGCGGTCCGCGTCCTGAACTCGCAGGT TACCGAGACAACCATGCAGCCTGGAAGGAAAGGCCGTGGCGCGATATCCCCGTGTCTACTCGCCATGATCCCGAG CTCCTGGCGAGGAACTTCATGGCGAGTCTGGTGCTGGGCACTACTGATCGCTGGATGAAGGGCTTTCCGATTCTT GAGCAGTTGTCGTCCATAGCGGACAGCGAGAGTGGTGATATCCAGCTGAAGCACTCATGGCGAGCTCTTCGCTGG AGAAGTCTCATCACTGGATGA |