Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|07005
Gene name
Locationscaffold_09:331952..333467
Strand+
Gene length (bp)1515
Transcript length (bp)1515
Coding sequence length (bp)1515
Protein length (aa) 505

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00324 AA_permease Amino acid permease 2.5E-125 30 494
PF13520 AA_permease_2 Amino acid permease 6.6E-30 30 455

GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Lysosome/Vacuole Transmembrane domain 0.0819 0.0845 0.0097 0.4642 0.1305 0.0096 0.3073 0.6161 0.2358 0.0012

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 33 55 22
2 65 87 22
3 108 130 22
4 140 162 22
5 169 191 22
6 221 243 22
7 256 278 22
8 309 331 22
9 361 380 19
10 390 412 22
11 439 461 22
12 471 489 18

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 54.31 30.62 78.01
Alive In ants, during behavior modification 110.25 45.87 174.64
Dead In ants, recently dead 44.85 24.94 64.77

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.002287 yes
Alive Dead 0.000238 yes
Dead Fungus 0.360059 no

Orthologs

Orthofinder run ID4
Orthogroup187
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4863
Ophiocordyceps australis 1348a (Ghana) OphauG2|7882
Ophiocordyceps australis map64 (Brazil) OphauB2|4046
Ophiocordyceps australis map64 (Brazil) OphauB2|6391
Ophiocordyceps camponoti-floridani Ophcf2|01989
Ophiocordyceps camponoti-floridani Ophcf2|07005 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|2792
Ophiocordyceps camponoti-rufipedis Ophun1|673
Ophiocordyceps kimflemingae Ophio5|6680
Ophiocordyceps kimflemingae Ophio5|8327
Ophiocordyceps subramaniannii Hirsu2|4801
Ophiocordyceps subramaniannii Hirsu2|6171

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|07005
MATEKKPDLTSGTTTASVPTALKRRLSARHLQFIAIGGTIGTGLFLGIGPALAISGPASLLLAFVLIGAVSYSVM
TALAEMAAYMPVTGAFTVYASRFVDPSVGFAMGWILLFSWSLTLAVELVAAGLIIQYWDASLNVGIWIAVFLVVF
TAVNLLPIRWFGELEMWFSLIKVIFIVGFVIFAACFNAGGVGSQGYLGFRYWRDPGAFAEYLVPGATGRFVGFWA
VLVVAGFTYQGTELVAIGAGETRDPAKEIPSAIRWTYYGIVSLFLATVLFVGIDIPYDNPDLSSRNAQQGKDASA
SPLVIIARIGGVETLSHLINAVLLTAVLSAANSDIYSSSRIMIALADEGHAPAWVQRTNRYGTPYFAVLFCSAFG
LFGFLKLSPGSGVEVFQWLLQITAIAGFVTWALINLCHLRFMSILRCKGMSRERLPYRAPFQPWLSMFGLVLNVL
ILLTSGFTVFIEWDWKQFLSAYVSILIFLVFFAVHKLVYRTRPVKLEEIELPTS*
Coding >Ophcf2|07005
ATGGCAACGGAGAAGAAGCCGGATCTCACATCCGGCACCACGACGGCCTCAGTCCCCACGGCGCTGAAACGAAGA
CTCTCAGCCCGACATCTGCAGTTCATAGCCATAGGCGGCACCATCGGAACCGGTCTCTTCCTGGGCATCGGACCG
GCGCTGGCGATTTCCGGTCCCGCGTCGCTGCTGCTCGCCTTCGTCCTCATCGGCGCCGTTTCTTATAGCGTCATG
ACGGCTCTGGCTGAGATGGCGGCTTACATGCCCGTCACCGGCGCCTTTACCGTCTACGCCTCGCGCTTCGTCGAT
CCGTCGGTTGGGTTCGCCATGGGATGGATCTTGTTGTTCTCTTGGTCTCTCACCCTCGCGGTCGAGCTGGTGGCC
GCGGGACTAATCATCCAATATTGGGACGCAAGTCTCAACGTTGGAATCTGGATCGCCGTCTTCCTCGTCGTTTTC
ACGGCCGTCAATCTCCTTCCCATCCGCTGGTTCGGCGAGTTGGAGATGTGGTTCTCGCTAATCAAGGTCATCTTC
ATCGTCGGCTTCGTCATCTTCGCCGCTTGCTTCAACGCGGGGGGTGTGGGATCGCAAGGGTATCTGGGTTTCAGG
TACTGGAGGGATCCGGGCGCGTTCGCAGAGTATCTCGTTCCCGGGGCCACTGGGAGATTCGTCGGCTTCTGGGCC
GTGCTCGTTGTCGCCGGCTTCACCTATCAGGGAACCGAGTTGGTTGCCATCGGAGCCGGAGAGACGCGAGATCCG
GCAAAGGAGATTCCGTCTGCCATACGATGGACGTACTACGGCATCGTCAGCCTCTTCCTCGCAACAGTCCTCTTC
GTCGGCATCGACATTCCCTACGACAACCCCGACCTGTCGAGCAGAAACGCCCAACAAGGAAAAGACGCCTCAGCC
TCCCCCCTCGTCATCATAGCCCGAATCGGCGGCGTGGAAACGCTCTCTCACCTGATAAACGCCGTCCTGTTAACG
GCCGTCCTCAGCGCCGCAAACTCGGACATCTACTCGAGCAGCAGGATAATGATCGCCCTGGCAGACGAAGGCCAC
GCCCCAGCCTGGGTCCAACGAACCAACAGATACGGAACTCCTTACTTCGCAGTCCTCTTCTGCTCGGCCTTTGGT
CTCTTCGGCTTCCTCAAGCTCTCGCCCGGATCGGGCGTCGAGGTCTTTCAATGGTTGCTGCAGATCACCGCCATT
GCCGGCTTCGTCACCTGGGCGCTCATCAATCTGTGTCACCTGCGCTTCATGTCCATCCTGCGATGCAAGGGAATG
TCGAGGGAGAGGTTGCCGTATCGGGCGCCCTTTCAGCCTTGGCTTTCCATGTTTGGACTCGTTTTGAATGTGCTC
ATCTTGCTGACGAGTGGGTTTACCGTCTTTATTGAGTGGGATTGGAAGCAGTTTCTTTCTGCCTATGTTAGTATC
CTTATTTTTCTCGTGTTTTTCGCCGTCCATAAGCTTGTTTACAGGACGAGGCCGGTTAAGCTTGAGGAGATTGAG
TTGCCGACTTCCTGA
Transcript >Ophcf2|07005
ATGGCAACGGAGAAGAAGCCGGATCTCACATCCGGCACCACGACGGCCTCAGTCCCCACGGCGCTGAAACGAAGA
CTCTCAGCCCGACATCTGCAGTTCATAGCCATAGGCGGCACCATCGGAACCGGTCTCTTCCTGGGCATCGGACCG
GCGCTGGCGATTTCCGGTCCCGCGTCGCTGCTGCTCGCCTTCGTCCTCATCGGCGCCGTTTCTTATAGCGTCATG
ACGGCTCTGGCTGAGATGGCGGCTTACATGCCCGTCACCGGCGCCTTTACCGTCTACGCCTCGCGCTTCGTCGAT
CCGTCGGTTGGGTTCGCCATGGGATGGATCTTGTTGTTCTCTTGGTCTCTCACCCTCGCGGTCGAGCTGGTGGCC
GCGGGACTAATCATCCAATATTGGGACGCAAGTCTCAACGTTGGAATCTGGATCGCCGTCTTCCTCGTCGTTTTC
ACGGCCGTCAATCTCCTTCCCATCCGCTGGTTCGGCGAGTTGGAGATGTGGTTCTCGCTAATCAAGGTCATCTTC
ATCGTCGGCTTCGTCATCTTCGCCGCTTGCTTCAACGCGGGGGGTGTGGGATCGCAAGGGTATCTGGGTTTCAGG
TACTGGAGGGATCCGGGCGCGTTCGCAGAGTATCTCGTTCCCGGGGCCACTGGGAGATTCGTCGGCTTCTGGGCC
GTGCTCGTTGTCGCCGGCTTCACCTATCAGGGAACCGAGTTGGTTGCCATCGGAGCCGGAGAGACGCGAGATCCG
GCAAAGGAGATTCCGTCTGCCATACGATGGACGTACTACGGCATCGTCAGCCTCTTCCTCGCAACAGTCCTCTTC
GTCGGCATCGACATTCCCTACGACAACCCCGACCTGTCGAGCAGAAACGCCCAACAAGGAAAAGACGCCTCAGCC
TCCCCCCTCGTCATCATAGCCCGAATCGGCGGCGTGGAAACGCTCTCTCACCTGATAAACGCCGTCCTGTTAACG
GCCGTCCTCAGCGCCGCAAACTCGGACATCTACTCGAGCAGCAGGATAATGATCGCCCTGGCAGACGAAGGCCAC
GCCCCAGCCTGGGTCCAACGAACCAACAGATACGGAACTCCTTACTTCGCAGTCCTCTTCTGCTCGGCCTTTGGT
CTCTTCGGCTTCCTCAAGCTCTCGCCCGGATCGGGCGTCGAGGTCTTTCAATGGTTGCTGCAGATCACCGCCATT
GCCGGCTTCGTCACCTGGGCGCTCATCAATCTGTGTCACCTGCGCTTCATGTCCATCCTGCGATGCAAGGGAATG
TCGAGGGAGAGGTTGCCGTATCGGGCGCCCTTTCAGCCTTGGCTTTCCATGTTTGGACTCGTTTTGAATGTGCTC
ATCTTGCTGACGAGTGGGTTTACCGTCTTTATTGAGTGGGATTGGAAGCAGTTTCTTTCTGCCTATGTTAGTATC
CTTATTTTTCTCGTGTTTTTCGCCGTCCATAAGCTTGTTTACAGGACGAGGCCGGTTAAGCTTGAGGAGATTGAG
TTGCCGACTTCCTGA
Gene >Ophcf2|07005
ATGGCAACGGAGAAGAAGCCGGATCTCACATCCGGCACCACGACGGCCTCAGTCCCCACGGCGCTGAAACGAAGA
CTCTCAGCCCGACATCTGCAGTTCATAGCCATAGGCGGCACCATCGGAACCGGTCTCTTCCTGGGCATCGGACCG
GCGCTGGCGATTTCCGGTCCCGCGTCGCTGCTGCTCGCCTTCGTCCTCATCGGCGCCGTTTCTTATAGCGTCATG
ACGGCTCTGGCTGAGATGGCGGCTTACATGCCCGTCACCGGCGCCTTTACCGTCTACGCCTCGCGCTTCGTCGAT
CCGTCGGTTGGGTTCGCCATGGGATGGATCTTGTTGTTCTCTTGGTCTCTCACCCTCGCGGTCGAGCTGGTGGCC
GCGGGACTAATCATCCAATATTGGGACGCAAGTCTCAACGTTGGAATCTGGATCGCCGTCTTCCTCGTCGTTTTC
ACGGCCGTCAATCTCCTTCCCATCCGCTGGTTCGGCGAGTTGGAGATGTGGTTCTCGCTAATCAAGGTCATCTTC
ATCGTCGGCTTCGTCATCTTCGCCGCTTGCTTCAACGCGGGGGGTGTGGGATCGCAAGGGTATCTGGGTTTCAGG
TACTGGAGGGATCCGGGCGCGTTCGCAGAGTATCTCGTTCCCGGGGCCACTGGGAGATTCGTCGGCTTCTGGGCC
GTGCTCGTTGTCGCCGGCTTCACCTATCAGGGAACCGAGTTGGTTGCCATCGGAGCCGGAGAGACGCGAGATCCG
GCAAAGGAGATTCCGTCTGCCATACGATGGACGTACTACGGCATCGTCAGCCTCTTCCTCGCAACAGTCCTCTTC
GTCGGCATCGACATTCCCTACGACAACCCCGACCTGTCGAGCAGAAACGCCCAACAAGGAAAAGACGCCTCAGCC
TCCCCCCTCGTCATCATAGCCCGAATCGGCGGCGTGGAAACGCTCTCTCACCTGATAAACGCCGTCCTGTTAACG
GCCGTCCTCAGCGCCGCAAACTCGGACATCTACTCGAGCAGCAGGATAATGATCGCCCTGGCAGACGAAGGCCAC
GCCCCAGCCTGGGTCCAACGAACCAACAGATACGGAACTCCTTACTTCGCAGTCCTCTTCTGCTCGGCCTTTGGT
CTCTTCGGCTTCCTCAAGCTCTCGCCCGGATCGGGCGTCGAGGTCTTTCAATGGTTGCTGCAGATCACCGCCATT
GCCGGCTTCGTCACCTGGGCGCTCATCAATCTGTGTCACCTGCGCTTCATGTCCATCCTGCGATGCAAGGGAATG
TCGAGGGAGAGGTTGCCGTATCGGGCGCCCTTTCAGCCTTGGCTTTCCATGTTTGGACTCGTTTTGAATGTGCTC
ATCTTGCTGACGAGTGGGTTTACCGTCTTTATTGAGTGGGATTGGAAGCAGTTTCTTTCTGCCTATGTTAGTATC
CTTATTTTTCTCGTGTTTTTCGCCGTCCATAAGCTTGTTTACAGGACGAGGCCGGTTAAGCTTGAGGAGATTGAG
TTGCCGACTTCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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