Protein ID | Ophcf2|07005 |
Gene name | |
Location | scaffold_09:331952..333467 |
Strand | + |
Gene length (bp) | 1515 |
Transcript length (bp) | 1515 |
Coding sequence length (bp) | 1515 |
Protein length (aa) | 505 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00324 | AA_permease | Amino acid permease | 2.5E-125 | 30 | 494 |
PF13520 | AA_permease_2 | Amino acid permease | 6.6E-30 | 30 | 455 |
GO Term | Description | Terminal node |
---|---|---|
GO:0022857 | transmembrane transporter activity | Yes |
GO:0016020 | membrane | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0005575 | cellular_component | No |
GO:0051179 | localization | No |
GO:0008150 | biological_process | No |
GO:0006810 | transport | No |
GO:0009987 | cellular process | No |
GO:0003674 | molecular_function | No |
GO:0005215 | transporter activity | No |
GO:0110165 | cellular anatomical entity | No |
GO:0051234 | establishment of localization | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 33 | 55 | 22 |
2 | 65 | 87 | 22 |
3 | 108 | 130 | 22 |
4 | 140 | 162 | 22 |
5 | 169 | 191 | 22 |
6 | 221 | 243 | 22 |
7 | 256 | 278 | 22 |
8 | 309 | 331 | 22 |
9 | 361 | 380 | 19 |
10 | 390 | 412 | 22 |
11 | 439 | 461 | 22 |
12 | 471 | 489 | 18 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 54.31 | 30.62 | 78.01 |
Alive | In ants, during behavior modification | 110.25 | 45.87 | 174.64 |
Dead | In ants, recently dead | 44.85 | 24.94 | 64.77 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.002287 | yes |
Alive | Dead | 0.000238 | yes |
Dead | Fungus | 0.360059 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|07005 MATEKKPDLTSGTTTASVPTALKRRLSARHLQFIAIGGTIGTGLFLGIGPALAISGPASLLLAFVLIGAVSYSVM TALAEMAAYMPVTGAFTVYASRFVDPSVGFAMGWILLFSWSLTLAVELVAAGLIIQYWDASLNVGIWIAVFLVVF TAVNLLPIRWFGELEMWFSLIKVIFIVGFVIFAACFNAGGVGSQGYLGFRYWRDPGAFAEYLVPGATGRFVGFWA VLVVAGFTYQGTELVAIGAGETRDPAKEIPSAIRWTYYGIVSLFLATVLFVGIDIPYDNPDLSSRNAQQGKDASA SPLVIIARIGGVETLSHLINAVLLTAVLSAANSDIYSSSRIMIALADEGHAPAWVQRTNRYGTPYFAVLFCSAFG LFGFLKLSPGSGVEVFQWLLQITAIAGFVTWALINLCHLRFMSILRCKGMSRERLPYRAPFQPWLSMFGLVLNVL ILLTSGFTVFIEWDWKQFLSAYVSILIFLVFFAVHKLVYRTRPVKLEEIELPTS* |
Coding | >Ophcf2|07005 ATGGCAACGGAGAAGAAGCCGGATCTCACATCCGGCACCACGACGGCCTCAGTCCCCACGGCGCTGAAACGAAGA CTCTCAGCCCGACATCTGCAGTTCATAGCCATAGGCGGCACCATCGGAACCGGTCTCTTCCTGGGCATCGGACCG GCGCTGGCGATTTCCGGTCCCGCGTCGCTGCTGCTCGCCTTCGTCCTCATCGGCGCCGTTTCTTATAGCGTCATG ACGGCTCTGGCTGAGATGGCGGCTTACATGCCCGTCACCGGCGCCTTTACCGTCTACGCCTCGCGCTTCGTCGAT CCGTCGGTTGGGTTCGCCATGGGATGGATCTTGTTGTTCTCTTGGTCTCTCACCCTCGCGGTCGAGCTGGTGGCC GCGGGACTAATCATCCAATATTGGGACGCAAGTCTCAACGTTGGAATCTGGATCGCCGTCTTCCTCGTCGTTTTC ACGGCCGTCAATCTCCTTCCCATCCGCTGGTTCGGCGAGTTGGAGATGTGGTTCTCGCTAATCAAGGTCATCTTC ATCGTCGGCTTCGTCATCTTCGCCGCTTGCTTCAACGCGGGGGGTGTGGGATCGCAAGGGTATCTGGGTTTCAGG TACTGGAGGGATCCGGGCGCGTTCGCAGAGTATCTCGTTCCCGGGGCCACTGGGAGATTCGTCGGCTTCTGGGCC GTGCTCGTTGTCGCCGGCTTCACCTATCAGGGAACCGAGTTGGTTGCCATCGGAGCCGGAGAGACGCGAGATCCG GCAAAGGAGATTCCGTCTGCCATACGATGGACGTACTACGGCATCGTCAGCCTCTTCCTCGCAACAGTCCTCTTC GTCGGCATCGACATTCCCTACGACAACCCCGACCTGTCGAGCAGAAACGCCCAACAAGGAAAAGACGCCTCAGCC TCCCCCCTCGTCATCATAGCCCGAATCGGCGGCGTGGAAACGCTCTCTCACCTGATAAACGCCGTCCTGTTAACG GCCGTCCTCAGCGCCGCAAACTCGGACATCTACTCGAGCAGCAGGATAATGATCGCCCTGGCAGACGAAGGCCAC GCCCCAGCCTGGGTCCAACGAACCAACAGATACGGAACTCCTTACTTCGCAGTCCTCTTCTGCTCGGCCTTTGGT CTCTTCGGCTTCCTCAAGCTCTCGCCCGGATCGGGCGTCGAGGTCTTTCAATGGTTGCTGCAGATCACCGCCATT GCCGGCTTCGTCACCTGGGCGCTCATCAATCTGTGTCACCTGCGCTTCATGTCCATCCTGCGATGCAAGGGAATG TCGAGGGAGAGGTTGCCGTATCGGGCGCCCTTTCAGCCTTGGCTTTCCATGTTTGGACTCGTTTTGAATGTGCTC ATCTTGCTGACGAGTGGGTTTACCGTCTTTATTGAGTGGGATTGGAAGCAGTTTCTTTCTGCCTATGTTAGTATC CTTATTTTTCTCGTGTTTTTCGCCGTCCATAAGCTTGTTTACAGGACGAGGCCGGTTAAGCTTGAGGAGATTGAG TTGCCGACTTCCTGA |
Transcript | >Ophcf2|07005 ATGGCAACGGAGAAGAAGCCGGATCTCACATCCGGCACCACGACGGCCTCAGTCCCCACGGCGCTGAAACGAAGA CTCTCAGCCCGACATCTGCAGTTCATAGCCATAGGCGGCACCATCGGAACCGGTCTCTTCCTGGGCATCGGACCG GCGCTGGCGATTTCCGGTCCCGCGTCGCTGCTGCTCGCCTTCGTCCTCATCGGCGCCGTTTCTTATAGCGTCATG ACGGCTCTGGCTGAGATGGCGGCTTACATGCCCGTCACCGGCGCCTTTACCGTCTACGCCTCGCGCTTCGTCGAT CCGTCGGTTGGGTTCGCCATGGGATGGATCTTGTTGTTCTCTTGGTCTCTCACCCTCGCGGTCGAGCTGGTGGCC GCGGGACTAATCATCCAATATTGGGACGCAAGTCTCAACGTTGGAATCTGGATCGCCGTCTTCCTCGTCGTTTTC ACGGCCGTCAATCTCCTTCCCATCCGCTGGTTCGGCGAGTTGGAGATGTGGTTCTCGCTAATCAAGGTCATCTTC ATCGTCGGCTTCGTCATCTTCGCCGCTTGCTTCAACGCGGGGGGTGTGGGATCGCAAGGGTATCTGGGTTTCAGG TACTGGAGGGATCCGGGCGCGTTCGCAGAGTATCTCGTTCCCGGGGCCACTGGGAGATTCGTCGGCTTCTGGGCC GTGCTCGTTGTCGCCGGCTTCACCTATCAGGGAACCGAGTTGGTTGCCATCGGAGCCGGAGAGACGCGAGATCCG GCAAAGGAGATTCCGTCTGCCATACGATGGACGTACTACGGCATCGTCAGCCTCTTCCTCGCAACAGTCCTCTTC GTCGGCATCGACATTCCCTACGACAACCCCGACCTGTCGAGCAGAAACGCCCAACAAGGAAAAGACGCCTCAGCC TCCCCCCTCGTCATCATAGCCCGAATCGGCGGCGTGGAAACGCTCTCTCACCTGATAAACGCCGTCCTGTTAACG GCCGTCCTCAGCGCCGCAAACTCGGACATCTACTCGAGCAGCAGGATAATGATCGCCCTGGCAGACGAAGGCCAC GCCCCAGCCTGGGTCCAACGAACCAACAGATACGGAACTCCTTACTTCGCAGTCCTCTTCTGCTCGGCCTTTGGT CTCTTCGGCTTCCTCAAGCTCTCGCCCGGATCGGGCGTCGAGGTCTTTCAATGGTTGCTGCAGATCACCGCCATT GCCGGCTTCGTCACCTGGGCGCTCATCAATCTGTGTCACCTGCGCTTCATGTCCATCCTGCGATGCAAGGGAATG TCGAGGGAGAGGTTGCCGTATCGGGCGCCCTTTCAGCCTTGGCTTTCCATGTTTGGACTCGTTTTGAATGTGCTC ATCTTGCTGACGAGTGGGTTTACCGTCTTTATTGAGTGGGATTGGAAGCAGTTTCTTTCTGCCTATGTTAGTATC CTTATTTTTCTCGTGTTTTTCGCCGTCCATAAGCTTGTTTACAGGACGAGGCCGGTTAAGCTTGAGGAGATTGAG TTGCCGACTTCCTGA |
Gene | >Ophcf2|07005 ATGGCAACGGAGAAGAAGCCGGATCTCACATCCGGCACCACGACGGCCTCAGTCCCCACGGCGCTGAAACGAAGA CTCTCAGCCCGACATCTGCAGTTCATAGCCATAGGCGGCACCATCGGAACCGGTCTCTTCCTGGGCATCGGACCG GCGCTGGCGATTTCCGGTCCCGCGTCGCTGCTGCTCGCCTTCGTCCTCATCGGCGCCGTTTCTTATAGCGTCATG ACGGCTCTGGCTGAGATGGCGGCTTACATGCCCGTCACCGGCGCCTTTACCGTCTACGCCTCGCGCTTCGTCGAT CCGTCGGTTGGGTTCGCCATGGGATGGATCTTGTTGTTCTCTTGGTCTCTCACCCTCGCGGTCGAGCTGGTGGCC GCGGGACTAATCATCCAATATTGGGACGCAAGTCTCAACGTTGGAATCTGGATCGCCGTCTTCCTCGTCGTTTTC ACGGCCGTCAATCTCCTTCCCATCCGCTGGTTCGGCGAGTTGGAGATGTGGTTCTCGCTAATCAAGGTCATCTTC ATCGTCGGCTTCGTCATCTTCGCCGCTTGCTTCAACGCGGGGGGTGTGGGATCGCAAGGGTATCTGGGTTTCAGG TACTGGAGGGATCCGGGCGCGTTCGCAGAGTATCTCGTTCCCGGGGCCACTGGGAGATTCGTCGGCTTCTGGGCC GTGCTCGTTGTCGCCGGCTTCACCTATCAGGGAACCGAGTTGGTTGCCATCGGAGCCGGAGAGACGCGAGATCCG GCAAAGGAGATTCCGTCTGCCATACGATGGACGTACTACGGCATCGTCAGCCTCTTCCTCGCAACAGTCCTCTTC GTCGGCATCGACATTCCCTACGACAACCCCGACCTGTCGAGCAGAAACGCCCAACAAGGAAAAGACGCCTCAGCC TCCCCCCTCGTCATCATAGCCCGAATCGGCGGCGTGGAAACGCTCTCTCACCTGATAAACGCCGTCCTGTTAACG GCCGTCCTCAGCGCCGCAAACTCGGACATCTACTCGAGCAGCAGGATAATGATCGCCCTGGCAGACGAAGGCCAC GCCCCAGCCTGGGTCCAACGAACCAACAGATACGGAACTCCTTACTTCGCAGTCCTCTTCTGCTCGGCCTTTGGT CTCTTCGGCTTCCTCAAGCTCTCGCCCGGATCGGGCGTCGAGGTCTTTCAATGGTTGCTGCAGATCACCGCCATT GCCGGCTTCGTCACCTGGGCGCTCATCAATCTGTGTCACCTGCGCTTCATGTCCATCCTGCGATGCAAGGGAATG TCGAGGGAGAGGTTGCCGTATCGGGCGCCCTTTCAGCCTTGGCTTTCCATGTTTGGACTCGTTTTGAATGTGCTC ATCTTGCTGACGAGTGGGTTTACCGTCTTTATTGAGTGGGATTGGAAGCAGTTTCTTTCTGCCTATGTTAGTATC CTTATTTTTCTCGTGTTTTTCGCCGTCCATAAGCTTGTTTACAGGACGAGGCCGGTTAAGCTTGAGGAGATTGAG TTGCCGACTTCCTGA |