Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06988
Gene name
Locationscaffold_09:294976..295777
Strand+
Gene length (bp)801
Transcript length (bp)693
Coding sequence length (bp)693
Protein length (aa) 231

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.45

Transmembrane Domains

Domain # Start End Length
1 54 76 22
2 114 136 22
3 149 171 22
4 191 213 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06988
MVSTRSSSSRAASNNNQLAPTDASPPTTPPKPARRSKRARSKDDDAWTHTPTRATLFWMAVSLPLVAWDTVYVLG
RPHTMEGGALHWPLWVPYKLYGEVDHIYGWKAFNARNGFTAAQGLLNLVETAMYLLYLILFFRSPSRRLTGRPAA
VAVLVGFSAAVMTLSKTVLYWMNEYYSGFDNIGHNPFFDLVYLWIIPNGAWLIGSSYMIWNLGSEILDGLETATV
HAKQE*
Coding >Ophcf2|06988
ATGGTCAGCACACGCTCCAGCTCCTCTCGAGCCGCCAGCAACAACAACCAGCTCGCGCCAACTGACGCCTCCCCC
CCGACGACCCCCCCGAAACCAGCCCGACGCTCGAAACGCGCGAGATCCAAGGACGACGATGCCTGGACTCACACG
CCCACTCGCGCCACGCTCTTCTGGATGGCCGTCTCGCTGCCCCTAGTCGCGTGGGATACCGTCTACGTGCTCGGC
CGGCCTCATACCATGGAAGGCGGAGCGCTGCACTGGCCGCTGTGGGTGCCGTACAAGCTGTACGGCGAGGTCGAT
CATATTTACGGCTGGAAGGCGTTTAATGCCCGTAACGGCTTTACGGCTGCTCAGGGGCTGCTTAACCTCGTCGAG
ACGGCCATGTACTTGCTGTACTTGATTCTATTCTTTCGATCGCCTTCTCGCCGTCTCACCGGTCGGCCTGCTGCT
GTTGCCGTGCTCGTTGGCTTCAGCGCGGCCGTGATGACGCTGAGCAAGACCGTCCTCTACTGGATGAACGAGTAT
TACAGCGGCTTCGACAACATTGGTCACAACCCTTTTTTCGATCTCGTGTACCTCTGGATCATCCCCAATGGCGCC
TGGCTCATCGGCTCTTCCTACATGATCTGGAACCTCGGCAGCGAGATCCTCGATGGCCTGGAGACGGCCACGGTC
CATGCCAAACAAGAATAA
Transcript >Ophcf2|06988
ATGGTCAGCACACGCTCCAGCTCCTCTCGAGCCGCCAGCAACAACAACCAGCTCGCGCCAACTGACGCCTCCCCC
CCGACGACCCCCCCGAAACCAGCCCGACGCTCGAAACGCGCGAGATCCAAGGACGACGATGCCTGGACTCACACG
CCCACTCGCGCCACGCTCTTCTGGATGGCCGTCTCGCTGCCCCTAGTCGCGTGGGATACCGTCTACGTGCTCGGC
CGGCCTCATACCATGGAAGGCGGAGCGCTGCACTGGCCGCTGTGGGTGCCGTACAAGCTGTACGGCGAGGTCGAT
CATATTTACGGCTGGAAGGCGTTTAATGCCCGTAACGGCTTTACGGCTGCTCAGGGGCTGCTTAACCTCGTCGAG
ACGGCCATGTACTTGCTGTACTTGATTCTATTCTTTCGATCGCCTTCTCGCCGTCTCACCGGTCGGCCTGCTGCT
GTTGCCGTGCTCGTTGGCTTCAGCGCGGCCGTGATGACGCTGAGCAAGACCGTCCTCTACTGGATGAACGAGTAT
TACAGCGGCTTCGACAACATTGGTCACAACCCTTTTTTCGATCTCGTGTACCTCTGGATCATCCCCAATGGCGCC
TGGCTCATCGGCTCTTCCTACATGATCTGGAACCTCGGCAGCGAGATCCTCGATGGCCTGGAGACGGCCACGGTC
CATGCCAAACAAGAATAA
Gene >Ophcf2|06988
ATGGTCAGCACACGCTCCAGCTCCTCTCGAGCCGCCAGCAACAACAACCAGCTCGCGCCAACTGACGCCTCCCCC
CCGACGACCCCCCCGAAACCAGCCCGACGCTCGAAACGCGCGAGATCCAAGGACGACGATGCCTGGACTCACACG
CCCACTCGCGCCACGCTCTTCTGGATGGCCGTCTCGCTGCCCCTAGTCGCGTGGGATACCGTCTACGTGCTCGGC
CGGCCTCATACCATGGAAGGCGGAGCGCTGCACTGGCCGCTGTGGGTGCCGTACAAGCTGTACGGCGAGGTCGAT
CATATTTACGGCTGGAAGGCGTTTAATGCCCGTAACGGCTTTACGGCTGCTCAGGGGCTGCTTAACCTCGTCGAG
ACGGCCATGTACTTGCTGTACTTGATTCTATTCTTTCGATCGCCTTCTCGCCGTCTCACCGGTCGGCCTGCTGCT
GTTGCCGTGCTCGTTGGCTTCAGCGCGGCCGTGATGACGCTGAGCAAGACCGTCCTCTACTGTGAGCCCGCCTAC
CTGTTCGCTCGCCTTCTTTTTTGACTGACTGGTGTCTTTAAGGGATGAACGAGTATTACAGCGGCTTCGACAACA
TTGGTCACAACCCTTTTTTCGATCTCGTGTACCTCTGGATCATCCCCAAGTCAGCGTTCCCGACTACCTAGGTCT
CAATCCTCAGGGCTGACCGGTCACAGTGGCGCCTGGCTCATCGGCTCTTCCTACATGATCTGGAACCTCGGCAGC
GAGATCCTCGATGGCCTGGAGACGGCCACGGTCCATGCCAAACAAGAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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