Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06987
Gene name
Locationscaffold_09:292513..294507
Strand-
Gene length (bp)1994
Transcript length (bp)795
Coding sequence length (bp)795
Protein length (aa) 265

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 73 95 22
2 100 120 20
3 135 157 22
4 164 186 22
5 216 238 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06987
MTILAPSLLALLLDQRVVRSSAILGFNYSHSAVSLCRKLLLQICRPSLLQDHRSTRFVASESSGPRASRLYQPSF
LFSMGVFTPPPIIALAYVGVRLFQIFLLLTPIVGLLAFFTDTTLSRFGFIDIRLLPEGVAIIFITSIVALGWCIL
TIIALFVANLDGKFIAIIDLGIMGALIGGVVRLRFIQFSCLVRRFFRTALTDLAFRLCVSVKASWILAIIAVIMF
FISAVLALAASLLRQPFRFGGKRRRRAVDSGGVHVHVDT*
Coding >Ophcf2|06987
ATGACGATTCTCGCTCCCTCCTTACTCGCGTTGCTGCTGGATCAGCGCGTAGTCCGAAGTTCTGCGATTCTCGGC
TTCAATTACTCGCACTCGGCCGTATCACTCTGCCGGAAACTATTGCTTCAGATTTGCCGTCCTTCTCTGCTTCAG
GACCATCGTTCAACCCGCTTCGTTGCGTCGGAATCAAGCGGTCCTCGGGCTTCGCGCCTCTATCAACCCTCCTTT
TTGTTCTCCATGGGTGTCTTTACTCCCCCCCCCATCATTGCCCTGGCGTACGTCGGCGTACGCTTGTTTCAAATA
TTTCTCCTCCTGACGCCCATCGTCGGCCTTCTCGCCTTCTTCACCGACACCACCTTGTCTCGATTCGGCTTCATC
GACATCAGGCTACTGCCAGAAGGAGTGGCCATCATCTTCATCACCTCCATCGTCGCCCTCGGATGGTGCATCCTC
ACCATCATCGCCCTATTCGTCGCCAATCTCGACGGCAAGTTTATAGCCATCATCGACTTGGGCATCATGGGCGCC
CTCATCGGAGGCGTCGTCCGTCTGCGCTTCATCCAGTTCTCCTGTCTCGTTCGTCGATTCTTCCGCACGGCGTTG
ACGGACTTGGCCTTTCGACTGTGCGTCTCCGTCAAAGCCAGCTGGATTCTCGCCATTATCGCCGTCATCATGTTC
TTCATATCGGCCGTGTTGGCTCTCGCTGCTTCTCTGCTTAGACAGCCCTTTCGCTTTGGCGGTAAGAGGAGGAGG
AGAGCGGTGGACAGTGGGGGGGTGCACGTTCACGTTGATACTTGA
Transcript >Ophcf2|06987
ATGACGATTCTCGCTCCCTCCTTACTCGCGTTGCTGCTGGATCAGCGCGTAGTCCGAAGTTCTGCGATTCTCGGC
TTCAATTACTCGCACTCGGCCGTATCACTCTGCCGGAAACTATTGCTTCAGATTTGCCGTCCTTCTCTGCTTCAG
GACCATCGTTCAACCCGCTTCGTTGCGTCGGAATCAAGCGGTCCTCGGGCTTCGCGCCTCTATCAACCCTCCTTT
TTGTTCTCCATGGGTGTCTTTACTCCCCCCCCCATCATTGCCCTGGCGTACGTCGGCGTACGCTTGTTTCAAATA
TTTCTCCTCCTGACGCCCATCGTCGGCCTTCTCGCCTTCTTCACCGACACCACCTTGTCTCGATTCGGCTTCATC
GACATCAGGCTACTGCCAGAAGGAGTGGCCATCATCTTCATCACCTCCATCGTCGCCCTCGGATGGTGCATCCTC
ACCATCATCGCCCTATTCGTCGCCAATCTCGACGGCAAGTTTATAGCCATCATCGACTTGGGCATCATGGGCGCC
CTCATCGGAGGCGTCGTCCGTCTGCGCTTCATCCAGTTCTCCTGTCTCGTTCGTCGATTCTTCCGCACGGCGTTG
ACGGACTTGGCCTTTCGACTGTGCGTCTCCGTCAAAGCCAGCTGGATTCTCGCCATTATCGCCGTCATCATGTTC
TTCATATCGGCCGTGTTGGCTCTCGCTGCTTCTCTGCTTAGACAGCCCTTTCGCTTTGGCGGTAAGAGGAGGAGG
AGAGCGGTGGACAGTGGGGGGGTGCACGTTCACGTTGATACTTGA
Gene >Ophcf2|06987
ATGACGATTCTCGCTCCCTCCTTACTCGCGTTGCTGCTGGATCAGCGCGTAGTCCGAAGTGTATGACTTGTCTTT
GGGCTTTTACGCCCTGCTTCCTCATATAGAAAGATGCTCTTATTTGATAGCCTAGTCTGCGATTCTCGGCTTCAA
TTACTCGCACTCGGCCGTATCACTCTGCCGGAAACTATTGCTTCGTACGAGATGCATGACTAGCCATTGCCCGCC
ACTTCACATTTGATCGAAAGAACTCTACCAGTTCAGCAGCAACCTCCAAAGATATCGACAACTCCCAACACTAAA
TCCCCGTCCTTTTACAACTCACGGTTCCTCAACACACAAACTCTCTCCCGCTCCCTCAAAAAAGACTCCTTCATC
ATCCCTCGTCGCGGCAACGTCCGAGCACAACCTCGCCGAAACCCGCTGCTTCACCCTCCGCGTTTCACCTGCCAT
CACCCGTCTCCCGAAGCACCTGCTAGCGTCGACCACCACTGTCCGGGGCTAGTTCCGAGATGAAGATCACGTCAC
CTCGCTGAAAGCCGATAGCAAAGGATGAGACGGAAAGAGAAAGCTGGTCGTCATCTTGTTCTGCTGTCAAGGGGT
AGGCCATTCTGCATTGTCTGCTCGAAACTACGTGTCAGACCCTTTCCTCTCTCCCCGTCATAGGTCGTCTTGACA
TCCGACGCTTCGTTCCTCTGTCGAGACGCCAGCCATGCGCCACGAGCCTTGTCTGCCGGACGTTTACCTCGGTCG
TCTCCGGATCGTCTCCTCAAACCATGTCTGTACGGCGTCTGCCCGTGACTCAATGCGACGCCCATCAGATTTTCC
CGGCTGGCTGGCTCATGGGCGGTAGGCAATAAGCTTATTCGAACGATCCGAGCCTTAGCTTGGTCGGATGGGGGT
AGCGGATTTGGGATGACACTCGAGACCACGAGTAAGGAAACTCGAGTAAGGCCAGCTCCCTAAACAGCGTCATTT
TTCATCTTGATCTTCTGTTACCACTCGTGACGGTCTGATTCAAGGGCTTGGCTCCCCTGTTCGTGTCCGTCCCGA
CTAGTCTCAGCGTGAACTTACTCGCTCGTTGCTCATATAGATGGTATCCGTCTGGGGGGTTTGTCTTATTCTTGA
GACTAAGAGACTCAGCATCATCGTATATATAGAGATTTGCCGTCCTTCTCTGCTTCAGGACCATCGTTCAACCCG
CTTCGTTGCGTCGGAATCAAGGTCAATTCCTATTCTCTGACATGACTTGGCCACGCGACACTGACACTTATTAAC
AGCGGTCCTCGGGCTTCGCGCCTCTATCAACCCTCCTTTTTGTTCTCGTCGGTCCTTGACGGAATCCTGCAGCAA
CACTTTAGACCGTTCTCTCGAATAGCATGGGTGTCTTTACTCCCCCCCCCATCATTGCCCTGGCGTACGTCGGCG
TACGCTTGTTTCAAATATTTCTCCTCCTGGTCAGTCATCCCTTTACCTCTTTTTTGGCTTCGACGGTGCTGATGG
TCTTCTCATAGACGCCCATCGTCGGCCTTCTCGCCTTCTTCACCGACACCACCTTGTCTCGATTCGGCTTCATCG
ACATCAGGCTACTGCCAGAAGGAGTGGCCATCATCTTCATCACCTCCATCGTCGCCCTCGGATGGTGCATCCTCA
CCATCATCGCCCTATTCGTCGCCAATCTCGACGGCAAGTTTATAGCCATCATCGACTTGGGCATCATGGGCGCCC
TCATCGGAGGCGTCGTCCGTCTGCGCTTCATCCAGTTCTCCTGTCTCGTTCGTCGATTCTTCCGCACGGCGTTGA
CGGACTTGGCCTTTCGACTGTGCGTCTCCGTCAAAGCCAGCTGGATTCTCGCCATTATCGCCGTCATCATGTTCT
TCATATCGGCCGTGTTGGCTCTCGCTGCTTCTCTGCTTAGACAGCCCTTTCGCTTTGGCGGTAAGAGGAGGAGGA
GAGCGGTGGACAGTGGGGGGGTGCACGTTCACGTTGATACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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