Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06980
Gene name
Locationscaffold_09:225721..227668
Strand+
Gene length (bp)1947
Transcript length (bp)1791
Coding sequence length (bp)1791
Protein length (aa) 597

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00083 Sugar_tr Sugar (and other) transporter 3.8E-66 119 557
PF07690 MFS_1 Major Facilitator Superfamily 3.1E-13 157 481

GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0008150 biological_process No
GO:0031224 intrinsic component of membrane No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

Domain # Start End Length
1 181 198 17
2 208 230 22
3 237 259 22
4 274 296 22
5 360 382 22
6 392 414 22
7 421 443 22
8 456 478 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 0.00 0.0 0.00
Alive In ants, during behavior modification 0.01 0.0 0.09
Dead In ants, recently dead 0.00 0.0 0.00

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 1.0 no
Alive Dead 1.0 no
Dead Fungus 1.0 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06980
MTATIATFDSPPPKSLRPDPSDDGPFEWEKNSGLPELGKLETMTTMGEDDSPFGRLRMMEESLWFSQKLGNSETR
NRGPSDKNLTFFQCCRKYYKALAWSGVLLSTMITMAYSKSLVIAILSTPNFEREFGVPRNPDDPSAGLIIEPFWQ
IALQDASLAGEVVGLMMCGPLTEIVGYRKMMIASLTWACIGVFPAVFFDDLPTLLGSQIVLGISWGVIEILAFMY
AAELVPHRLRDVVISSANMCWLIGKLLSAGFLDGFGDKDLGWTAGLPFVFQWVCAVPALLAVFFVPESPWWLIRR
GRLRDACLSLDRLSSSKDTDADAAVALMDHTNKTEMKLKYGGARAVDMFKGTNRRRTEIACMVWICQAFSGSSIV
NYAPYLMQRAGLDASASGTFATIMYGIAVTGGILSLFVVQYVGRRLLYLLGLGSAVVFLVVAGIVSVALPPSFAV
GWTLTALIIVTKLTYDLSIGPVCYILVTEVPAMRLRLNTVAFGRIIYNIGKMANNVVMPQMTNPETWDWKGKVCF
VYAGTSLACFIWCYFRLPETKGLAHIEIDILFELKAPANKFAAFRKQLEKTPYNSAVNHDKNPWHGWLSYA*
Coding >Ophcf2|06980
ATGACAGCCACGATTGCAACGTTCGACTCCCCCCCGCCAAAGAGCCTCAGGCCGGACCCGTCGGACGATGGCCCC
TTCGAGTGGGAGAAGAATAGCGGCTTGCCGGAGCTGGGCAAGCTGGAGACGATGACGACAATGGGCGAAGACGAC
TCGCCCTTTGGAAGGCTGAGGATGATGGAGGAGTCTCTCTGGTTCTCGCAGAAGTTGGGGAACTCGGAGACGAGA
AACAGAGGCCCCTCGGACAAGAACCTGACCTTTTTCCAATGCTGCCGCAAGTATTACAAGGCACTGGCCTGGTCG
GGCGTGCTTCTCTCGACCATGATCACCATGGCCTACAGCAAGTCTCTCGTCATCGCCATCCTCTCGACGCCCAAC
TTCGAACGCGAGTTTGGCGTTCCGAGGAATCCCGACGACCCTTCGGCTGGCTTGATCATCGAGCCCTTCTGGCAG
ATTGCCCTGCAGGATGCTTCTCTCGCGGGCGAGGTTGTGGGACTGATGATGTGTGGTCCGCTGACGGAGATTGTC
GGTTACCGCAAGATGATGATTGCGAGTCTGACGTGGGCTTGTATCGGGGTGTTTCCGGCGGTCTTCTTTGACGAT
CTACCGACCTTGCTGGGGTCGCAGATTGTTCTCGGCATATCATGGGGAGTCATCGAGATCCTCGCCTTCATGTAC
GCGGCCGAGCTGGTGCCTCACCGACTCCGAGATGTCGTCATCAGCAGCGCCAACATGTGCTGGCTCATCGGGAAA
CTCTTGTCTGCCGGATTCCTCGACGGTTTCGGCGACAAGGACCTGGGCTGGACGGCTGGGCTGCCCTTCGTCTTT
CAATGGGTCTGTGCCGTTCCTGCTCTCCTGGCCGTCTTTTTCGTTCCCGAGAGTCCTTGGTGGCTTATACGCCGT
GGTCGGTTGAGAGACGCCTGTCTTTCCCTCGACCGGCTCTCCAGCAGCAAGGATACCGACGCCGACGCAGCGGTG
GCCCTGATGGACCACACCAACAAGACCGAGATGAAGCTCAAGTACGGCGGAGCGAGGGCCGTAGACATGTTCAAG
GGGACGAATCGACGCCGTACCGAGATAGCCTGCATGGTCTGGATCTGTCAGGCCTTCTCCGGCAGCTCCATCGTC
AACTACGCCCCCTATCTCATGCAGAGAGCCGGGCTCGACGCCTCGGCCTCGGGCACCTTCGCCACCATCATGTAC
GGCATCGCCGTGACGGGCGGCATCCTATCTCTCTTTGTCGTCCAGTACGTCGGCAGACGACTTCTCTATCTCCTG
GGTCTCGGATCGGCAGTCGTCTTCCTCGTCGTCGCGGGCATCGTCTCCGTCGCCCTCCCCCCGAGCTTCGCCGTC
GGCTGGACCTTGACTGCTCTCATAATCGTCACCAAGCTCACCTACGACCTCTCCATCGGCCCCGTCTGCTACATA
CTCGTCACCGAGGTTCCCGCAATGCGTCTTCGTCTCAACACGGTCGCCTTTGGAAGGATCATCTACAACATCGGA
AAGATGGCCAACAACGTCGTCATGCCGCAGATGACCAACCCCGAGACCTGGGACTGGAAGGGAAAAGTCTGCTTC
GTCTACGCCGGCACTTCTCTCGCCTGTTTCATCTGGTGCTACTTCCGCTTGCCCGAGACCAAGGGCCTCGCTCAC
ATCGAGATTGACATTCTCTTCGAGCTCAAGGCTCCGGCCAACAAGTTTGCTGCCTTTCGGAAACAGCTGGAGAAG
ACGCCGTATAATTCGGCCGTGAATCACGACAAGAACCCATGGCACGGGTGGCTTTCGTATGCGTAG
Transcript >Ophcf2|06980
ATGACAGCCACGATTGCAACGTTCGACTCCCCCCCGCCAAAGAGCCTCAGGCCGGACCCGTCGGACGATGGCCCC
TTCGAGTGGGAGAAGAATAGCGGCTTGCCGGAGCTGGGCAAGCTGGAGACGATGACGACAATGGGCGAAGACGAC
TCGCCCTTTGGAAGGCTGAGGATGATGGAGGAGTCTCTCTGGTTCTCGCAGAAGTTGGGGAACTCGGAGACGAGA
AACAGAGGCCCCTCGGACAAGAACCTGACCTTTTTCCAATGCTGCCGCAAGTATTACAAGGCACTGGCCTGGTCG
GGCGTGCTTCTCTCGACCATGATCACCATGGCCTACAGCAAGTCTCTCGTCATCGCCATCCTCTCGACGCCCAAC
TTCGAACGCGAGTTTGGCGTTCCGAGGAATCCCGACGACCCTTCGGCTGGCTTGATCATCGAGCCCTTCTGGCAG
ATTGCCCTGCAGGATGCTTCTCTCGCGGGCGAGGTTGTGGGACTGATGATGTGTGGTCCGCTGACGGAGATTGTC
GGTTACCGCAAGATGATGATTGCGAGTCTGACGTGGGCTTGTATCGGGGTGTTTCCGGCGGTCTTCTTTGACGAT
CTACCGACCTTGCTGGGGTCGCAGATTGTTCTCGGCATATCATGGGGAGTCATCGAGATCCTCGCCTTCATGTAC
GCGGCCGAGCTGGTGCCTCACCGACTCCGAGATGTCGTCATCAGCAGCGCCAACATGTGCTGGCTCATCGGGAAA
CTCTTGTCTGCCGGATTCCTCGACGGTTTCGGCGACAAGGACCTGGGCTGGACGGCTGGGCTGCCCTTCGTCTTT
CAATGGGTCTGTGCCGTTCCTGCTCTCCTGGCCGTCTTTTTCGTTCCCGAGAGTCCTTGGTGGCTTATACGCCGT
GGTCGGTTGAGAGACGCCTGTCTTTCCCTCGACCGGCTCTCCAGCAGCAAGGATACCGACGCCGACGCAGCGGTG
GCCCTGATGGACCACACCAACAAGACCGAGATGAAGCTCAAGTACGGCGGAGCGAGGGCCGTAGACATGTTCAAG
GGGACGAATCGACGCCGTACCGAGATAGCCTGCATGGTCTGGATCTGTCAGGCCTTCTCCGGCAGCTCCATCGTC
AACTACGCCCCCTATCTCATGCAGAGAGCCGGGCTCGACGCCTCGGCCTCGGGCACCTTCGCCACCATCATGTAC
GGCATCGCCGTGACGGGCGGCATCCTATCTCTCTTTGTCGTCCAGTACGTCGGCAGACGACTTCTCTATCTCCTG
GGTCTCGGATCGGCAGTCGTCTTCCTCGTCGTCGCGGGCATCGTCTCCGTCGCCCTCCCCCCGAGCTTCGCCGTC
GGCTGGACCTTGACTGCTCTCATAATCGTCACCAAGCTCACCTACGACCTCTCCATCGGCCCCGTCTGCTACATA
CTCGTCACCGAGGTTCCCGCAATGCGTCTTCGTCTCAACACGGTCGCCTTTGGAAGGATCATCTACAACATCGGA
AAGATGGCCAACAACGTCGTCATGCCGCAGATGACCAACCCCGAGACCTGGGACTGGAAGGGAAAAGTCTGCTTC
GTCTACGCCGGCACTTCTCTCGCCTGTTTCATCTGGTGCTACTTCCGCTTGCCCGAGACCAAGGGCCTCGCTCAC
ATCGAGATTGACATTCTCTTCGAGCTCAAGGCTCCGGCCAACAAGTTTGCTGCCTTTCGGAAACAGCTGGAGAAG
ACGCCGTATAATTCGGCCGTGAATCACGACAAGAACCCATGGCACGGGTGGCTTTCGTATGCGTAG
Gene >Ophcf2|06980
ATGACAGCCACGATTGCAACGTTCGACTCCCCCCCGCCAAAGAGCCTCAGGCCGGACCCGTCGGACGATGGCCCC
TTCGAGTGGGAGAAGAATAGCGGCTTGCCGGAGCTGGGCAAGCTGGAGACGATGACGACAATGGGCGAAGACGAC
TCGCCCTTTGGAAGGCTGAGGATGATGGAGGAGTCTCTCTGGTTCTCGCAGAAGTTGGGGAACTCGGAGACGAGA
AACAGAGGCCCCTCGGACAAGAACCTGACCTTTTTCCAATGCTGCCGCAAGTATTACAAGGCACTGGCCTGGTCG
GGCGTGCTTCTCTCGACCATGATCACCATGGCCTACAGCAAGTCTCTCGTCATCGCCATCCTCTCGACGCCCAAC
TTCGAACGCGAGTTTGGCGTTCCGAGGAATCCCGACGACCCTTCGGCTGGCTTGATCATCGAGCCCTTCTGGCAG
ATTGCCCTGCAGGATGCTTCTCTCGCGGGCGAGGTTGTGGGACTGATGATGTGTGGTCCGCTGACGGAGATTGTC
GGTTACCGCAAGATGATGATTGCGAGTCTGACGTGGGCTTGTATCGGGGTGTTTCCGGCGGTCTTCTTTGACGAT
CTACCGACCTTGCTGGGGTCGCAGATTGTTCTCGGTTCGTTTTGTTGTAGTTCGAACGACTGATGTGCTGTTGCT
GATGCTCACATACGACGTATGTACGGAAAACACCAGGCATATCATGGGGAGTCATCGAGATCCTCGCCTTCATGT
ACGCGGCCGAGCTGGTGCCTCACCGACTCCGAGATGTCGTCATCAGCAGCGCCAACATGTGCTGGCTCATCGGGA
AACTCTTGTCTGCCGGATTCCTCGACGGTTTCGGCGACAAGGACCTGGGCTGGACGGCTGGGCTGCCCTTCGTCT
TTCAATGGGTCTGTGCCGTTCCTGCTCTCCTGGCCGTCTTTTTCGTTCCCGAGAGTCCTTGTGAGTCGGTCACGA
ACAGCTCTCTCTATACGGAAGAGGTGTATACATGGCACTAACATCATGTCCAACGTCTTTCAAGGGTGGCTTATA
CGCCGTGGTCGGTTGAGAGACGCCTGTCTTTCCCTCGACCGGCTCTCCAGCAGCAAGGATACCGACGCCGACGCA
GCGGTGGCCCTGATGGACCACACCAACAAGACCGAGATGAAGCTCAAGTACGGCGGAGCGAGGGCCGTAGACATG
TTCAAGGGGACGAATCGACGCCGTACCGAGATAGCCTGCATGGTCTGGATCTGTCAGGCCTTCTCCGGCAGCTCC
ATCGTCAACTACGCCCCCTATCTCATGCAGAGAGCCGGGCTCGACGCCTCGGCCTCGGGCACCTTCGCCACCATC
ATGTACGGCATCGCCGTGACGGGCGGCATCCTATCTCTCTTTGTCGTCCAGTACGTCGGCAGACGACTTCTCTAT
CTCCTGGGTCTCGGATCGGCAGTCGTCTTCCTCGTCGTCGCGGGCATCGTCTCCGTCGCCCTCCCCCCGAGCTTC
GCCGTCGGCTGGACCTTGACTGCTCTCATAATCGTCACCAAGCTCACCTACGACCTCTCCATCGGCCCCGTCTGC
TACATACTCGTCACCGAGGTTCCCGCAATGCGTCTTCGTCTCAACACGGTCGCCTTTGGAAGGATCATCTACAAC
ATCGGAAAGATGGCCAACAACGTCGTCATGCCGCAGATGACCAACCCCGAGACCTGGGACTGGAAGGGAAAAGTC
TGCTTCGTCTACGCCGGCACTTCTCTCGCCTGTTTCATCTGGTGCTACTTCCGCTTGCCCGAGACCAAGGGCCTC
GCTCACATCGAGATTGACATTCTCTTCGAGCTCAAGGCTCCGGCCAACAAGTTTGCTGCCTTTCGGAAACAGCTG
GAGAAGACGCCGTATAATTCGGCCGTGAATCACGACAAGAACCCATGGCACGGGTGGCTTTCGTATGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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