Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06978
Gene name
Locationscaffold_09:213225..215008
Strand+
Gene length (bp)1783
Transcript length (bp)1479
Coding sequence length (bp)1479
Protein length (aa) 493

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01222 ERG4_ERG24 Ergosterol biosynthesis ERG4/ERG24 family 1.8E-166 21 492

GO

GO Term Description Terminal node
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor Yes
GO:0016020 membrane Yes
GO:0016126 sterol biosynthetic process Yes
GO:1901360 organic cyclic compound metabolic process No
GO:0110165 cellular anatomical entity No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0008152 metabolic process No
GO:0006694 steroid biosynthetic process No
GO:0009058 biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0016491 oxidoreductase activity No
GO:0008202 steroid metabolic process No
GO:0003824 catalytic activity No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0005575 cellular_component No
GO:0006629 lipid metabolic process No
GO:0003674 molecular_function No
GO:0008610 lipid biosynthetic process No
GO:1901615 organic hydroxy compound metabolic process No
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors No
GO:0016125 sterol metabolic process No
GO:0008150 biological_process No
GO:1901617 organic hydroxy compound biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 86 108 22
3 128 150 22
4 165 187 22
5 257 276 19
6 296 315 19
7 327 346 19
8 440 459 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 141.53 77.61 205.46
Alive In ants, during behavior modification 72.56 41.07 104.05
Dead In ants, recently dead 107.63 60.28 154.98

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.000851 yes
Alive Dead 0.012830 yes
Dead Fungus 0.173065 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06978
MKHHERTSLSITMAPNSVAEHGYEFFGPPGAFGISFGLPLLVYAFTFACNDVSGCPAPALLRPSTLSSDQLKLQV
GWPEDGVWGLASWKATGALLAYYALNLVLYRVLPAAQTEGTVLASGGRLKYRLNTMYSNTMTLAVLAAGTVAQGA
DFSVWRFIDENYVQLLTASIGISYAMSTFVYVRSFGVKPGNKDGRELAAGGHSGNMLYDWFIGRELNPRVVVPLI
GEVDIKEWCELRPGMMGWIVLNCAWCVRQYRNYGYVTDSILCITAVQAVYTVDSWWNEAAILTTMDITTDGFGMM
LAFGDLVWVPFVYSLQTRYLSVHPRSLGPAGLVAMLSLIGLGFFIFRSANSQKNVFRTNPEDPSVSNLEYIETKT
GSRLLTTGWWGVARHINYLGDWIQAWPYSLPTGLAGYQVLAAGTGSEGAYVMMDGREVVAGEAKGWGMVVTYFYI
VYFAVLLIHRDRRDDEKCQRKYGEDWTKYKKLVRWRIVPGLY*
Coding >Ophcf2|06978
ATGAAGCATCACGAGAGAACATCGCTCTCCATCACAATGGCGCCCAACTCAGTTGCAGAGCACGGCTACGAATTC
TTCGGACCCCCCGGGGCCTTCGGCATCTCCTTCGGTCTGCCCCTTCTCGTTTACGCCTTTACCTTTGCCTGCAAC
GATGTCTCAGGCTGTCCGGCGCCCGCGTTGCTCCGCCCGTCGACGTTGTCTTCGGACCAGTTGAAGCTTCAGGTT
GGCTGGCCCGAGGATGGCGTTTGGGGTCTGGCCAGCTGGAAGGCGACGGGCGCCTTACTGGCTTATTACGCCCTC
AACCTCGTCCTGTACCGCGTGCTGCCTGCCGCTCAAACCGAGGGTACCGTTCTGGCCTCGGGTGGGCGACTCAAG
TATAGGCTCAACACCATGTATTCCAACACGATGACTCTCGCCGTGCTCGCCGCGGGCACCGTTGCTCAAGGCGCC
GACTTTTCCGTCTGGCGCTTCATCGACGAGAACTACGTGCAGCTGCTGACGGCGAGCATCGGCATCTCGTATGCC
ATGTCCACCTTTGTCTACGTCCGGAGCTTCGGCGTCAAGCCCGGCAACAAAGATGGCCGCGAGCTGGCAGCGGGC
GGACACAGCGGCAACATGCTGTACGACTGGTTCATCGGACGGGAGCTTAATCCCAGAGTCGTCGTGCCGCTCATC
GGCGAGGTGGACATCAAGGAGTGGTGCGAGCTGCGACCGGGTATGATGGGCTGGATCGTGCTCAACTGCGCCTGG
TGCGTCCGTCAGTATCGCAACTATGGTTACGTGACGGATAGTATCTTGTGCATCACCGCCGTTCAGGCCGTTTAC
ACGGTCGATTCGTGGTGGAACGAGGCGGCCATTCTGACGACCATGGACATTACCACCGACGGCTTCGGCATGATG
CTGGCGTTTGGCGACCTGGTATGGGTGCCCTTTGTCTACTCGCTACAGACGCGCTACCTCTCGGTGCATCCGCGC
TCGCTAGGACCCGCGGGCTTGGTGGCGATGCTCAGCCTCATCGGCCTTGGCTTCTTCATCTTCCGGTCGGCCAAC
AGCCAGAAGAACGTGTTTAGGACGAACCCCGAGGACCCCAGCGTCTCCAACCTCGAATACATCGAGACCAAGACA
GGCAGCCGGCTGCTGACGACGGGCTGGTGGGGGGTGGCGCGGCACATCAACTACCTGGGCGACTGGATCCAGGCG
TGGCCGTACAGCTTGCCGACGGGCCTGGCCGGGTACCAGGTGCTGGCGGCCGGGACGGGCTCCGAGGGCGCGTAC
GTGATGATGGATGGCCGCGAGGTGGTGGCCGGCGAAGCCAAGGGCTGGGGCATGGTGGTGACGTACTTTTACATT
GTCTACTTTGCCGTGCTGCTGATCCATCGCGACCGACGCGACGACGAAAAGTGCCAGCGCAAGTACGGCGAGGAT
TGGACCAAGTACAAGAAGCTTGTGCGATGGCGCATCGTCCCGGGCCTATACTGA
Transcript >Ophcf2|06978
ATGAAGCATCACGAGAGAACATCGCTCTCCATCACAATGGCGCCCAACTCAGTTGCAGAGCACGGCTACGAATTC
TTCGGACCCCCCGGGGCCTTCGGCATCTCCTTCGGTCTGCCCCTTCTCGTTTACGCCTTTACCTTTGCCTGCAAC
GATGTCTCAGGCTGTCCGGCGCCCGCGTTGCTCCGCCCGTCGACGTTGTCTTCGGACCAGTTGAAGCTTCAGGTT
GGCTGGCCCGAGGATGGCGTTTGGGGTCTGGCCAGCTGGAAGGCGACGGGCGCCTTACTGGCTTATTACGCCCTC
AACCTCGTCCTGTACCGCGTGCTGCCTGCCGCTCAAACCGAGGGTACCGTTCTGGCCTCGGGTGGGCGACTCAAG
TATAGGCTCAACACCATGTATTCCAACACGATGACTCTCGCCGTGCTCGCCGCGGGCACCGTTGCTCAAGGCGCC
GACTTTTCCGTCTGGCGCTTCATCGACGAGAACTACGTGCAGCTGCTGACGGCGAGCATCGGCATCTCGTATGCC
ATGTCCACCTTTGTCTACGTCCGGAGCTTCGGCGTCAAGCCCGGCAACAAAGATGGCCGCGAGCTGGCAGCGGGC
GGACACAGCGGCAACATGCTGTACGACTGGTTCATCGGACGGGAGCTTAATCCCAGAGTCGTCGTGCCGCTCATC
GGCGAGGTGGACATCAAGGAGTGGTGCGAGCTGCGACCGGGTATGATGGGCTGGATCGTGCTCAACTGCGCCTGG
TGCGTCCGTCAGTATCGCAACTATGGTTACGTGACGGATAGTATCTTGTGCATCACCGCCGTTCAGGCCGTTTAC
ACGGTCGATTCGTGGTGGAACGAGGCGGCCATTCTGACGACCATGGACATTACCACCGACGGCTTCGGCATGATG
CTGGCGTTTGGCGACCTGGTATGGGTGCCCTTTGTCTACTCGCTACAGACGCGCTACCTCTCGGTGCATCCGCGC
TCGCTAGGACCCGCGGGCTTGGTGGCGATGCTCAGCCTCATCGGCCTTGGCTTCTTCATCTTCCGGTCGGCCAAC
AGCCAGAAGAACGTGTTTAGGACGAACCCCGAGGACCCCAGCGTCTCCAACCTCGAATACATCGAGACCAAGACA
GGCAGCCGGCTGCTGACGACGGGCTGGTGGGGGGTGGCGCGGCACATCAACTACCTGGGCGACTGGATCCAGGCG
TGGCCGTACAGCTTGCCGACGGGCCTGGCCGGGTACCAGGTGCTGGCGGCCGGGACGGGCTCCGAGGGCGCGTAC
GTGATGATGGATGGCCGCGAGGTGGTGGCCGGCGAAGCCAAGGGCTGGGGCATGGTGGTGACGTACTTTTACATT
GTCTACTTTGCCGTGCTGCTGATCCATCGCGACCGACGCGACGACGAAAAGTGCCAGCGCAAGTACGGCGAGGAT
TGGACCAAGTACAAGAAGCTTGTGCGATGGCGCATCGTCCCGGGCCTATACTGA
Gene >Ophcf2|06978
ATGAAGCATCACGAGTTGGATACCTCGATAAACCCAGAGGCGCAGCGTGGCGTTATTCTATAATCTACGAATACA
TCAATCGTACATACCTAGGTAGATAAGCTCCGTCATATCGTCGAAAGGAGAACATCGCTGTAAGCAATATCGTTA
TACCCATCTACAAAGACTGATCATCTCATCTCGAAACCCGACCTGATTTTTTCCCTCGCACAAGCTCCATCACAA
TGGCGCCCAACTCAGTTGCAGAGCACGGCTACGAATTCTTCGGACCGTACGTCGCCCCGCTCCCGCCGACCGGCC
TCCGTCCGCGCTGACTTTCCGCCGCTGCAGCCCCGGGGCCTTCGGCATCTCCTTCGGTCTGCCCCTTCTCGTTTA
CGCCTTTACCTTTGCCTGCAACGATGTCTCAGGCTGTCCGGCGCCCGCGTTGCTCCGCCCGTCGACGTTGTCTTC
GGACCAGTTGAAGCTTCAGGTTGGCTGGCCCGAGGATGGCGTTTGGGGTCTGGCCAGCTGGAAGGCGACGGGCGC
CTTACTGGCTTATTACGCCCTCAACCTCGTCCTGTACCGCGTGCTGCCTGCCGCTCAAACCGAGGGTACCGTTCT
GGCCTCGGGTGGGCGACTCAAGTATAGGCTCAACAGTGAGTGACGTGGTCGAGCTCCGGAGTAGCATCGTGCTGA
TGATTCGGGGGTCGCAGCCATGTATTCCAACACGATGACTCTCGCCGTGCTCGCCGCGGGCACCGTTGCTCAAGG
CGCCGACTTTTCCGTCTGGCGCTTCATCGACGAGAACTACGTGCAGCTGCTGACGGCGAGCATCGGCATCTCGTA
TGCCATGTCCACCTTTGTCTACGTCCGGAGCTTCGGCGTCAAGCCCGGCAACAAAGATGGCCGCGAGCTGGCAGC
GGGCGGACACAGCGGCAACATGCTGTACGACTGGTTCATCGGACGGGAGCTTAATCCCAGAGTCGTCGTGCCGCT
CATCGGCGAGGTGGACATCAAGGAGTGGTGCGAGCTGCGACCGGGTATGATGGGCTGGATCGTGCTCAACTGCGC
CTGGTGCGTCCGTCAGTATCGCAACTATGGTTACGTGACGGATAGTATCTTGTGCATCACCGCCGTTCAGGCCGT
TTACACGGTCGATTCGTGGTGGAACGAGGCGGCCATTCTGACGACCATGGACATTACCACCGACGGCTTCGGCAT
GATGCTGGCGTTTGGCGACCTGGTATGGGTGCCCTTTGTCTACTCGCTACAGACGCGCTACCTCTCGGTGCATCC
GCGCTCGCTAGGACCCGCGGGCTTGGTGGCGATGCTCAGCCTCATCGGCCTTGGCTTCTTCATCTTCCGGTCGGC
CAACAGCCAGAAGAACGTGTTTAGGACGAACCCCGAGGACCCCAGCGTCTCCAACCTCGAATACATCGAGACCAA
GACAGGCAGCCGGCTGCTGACGACGGGCTGGTGGGGGGTGGCGCGGCACATCAACTACCTGGGCGACTGGATCCA
GGCGTGGCCGTACAGCTTGCCGACGGGCCTGGCCGGGTACCAGGTGCTGGCGGCCGGGACGGGCTCCGAGGGCGC
GTACGTGATGATGGATGGCCGCGAGGTGGTGGCCGGCGAAGCCAAGGGCTGGGGCATGGTGGTGACGTACTTTTA
CATTGTCTACTTTGCCGTGCTGCTGATCCATCGCGACCGACGCGACGACGAAAAGTGCCAGCGCAAGTACGGCGA
GGATTGGACCAAGTACAAGAAGCTTGTGCGATGGCGCATCGTCCCGGGCCTATACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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