© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|06975 |
| Gene name | |
| Location | scaffold_09:203578..205699 |
| Strand | + |
| Gene length (bp) | 2121 |
| Transcript length (bp) | 2121 |
| Coding sequence length (bp) | 2121 |
| Protein length (aa) | 707 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 5.6E-13 | 72 | 237 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005615 | extracellular space | Yes |
| GO:0090729 | toxin activity | Yes |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1691 | 0.1471 | 0.586 | 0.1074 | 0.4292 | 0.377 | 0.22 | 0.2256 | 0.2579 | 0.1252 |
| Orthofinder run ID | 4 |
| Orthogroup | 2 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|06975 MKRLLSFVALFSPPGHSQLSPRGVGSSKLSPAEELIPAPPNLGLESWDLRPVGLPDLQDESPRFVLRGEYGRSPA DVRRAGGLYARGRYGSPEKGIEDVACNLVYHVQGRSAPFTKFVSTTTSKEMAMIFASNNLELPGEWSRYGTIYMI AADSKMINAIKSIPTDKYPSWYKNQKEFSVAGGVPMSQIKGWFVPKYMNGREIHWGFIFNADFDTAHLENLKDGG AQPQLAGPVEGSKERLESYVKDVVFKGDEGEFRRFWYPENDRGASAAPGACAGLGKRDNEACNQDDATESSKNGD ETKGFSSDIGADGGDKTVADNPGRDFELSAEAIARKEFETLAIKFGITDLVWHKSAKTKISFLHQLFTGFRGYGK VSTISRPKMRSLRLSSGVLAVAGLGLYVKSVVDEFSQDTSALDRAAVVTSILPFVGCGLQAVAAQKHGILNIWDT ALCVVGDALLLSPAWPVWFLVQGLRYLIGAVTSVLSPRQVRVRRDEAWQAYLRKARNYLQSDNFTSDIETHFKVE MAAVLFAAAEAHGKLIAGRDLFLVNASHQRRLTVIERTLETRIGVQGDMCEAIVKKMAELQRDLPIILKRSMRED SEKLNDRFVAQYRPASYYAANSIKLFSTYIRSVHPIPQRHIVSAARLAGDRIRSVLEKVYGDSPCKVGALGELAS DDAAYKKWLQLHRDGAIEQERDINQSLKILK* |
| Coding | >Ophcf2|06975 ATGAAGAGGCTCCTCTCGTTCGTTGCCCTCTTCTCACCACCTGGTCACAGTCAACTCTCTCCTCGTGGAGTTGGC TCGAGTAAACTCTCTCCTGCGGAAGAACTCATCCCTGCTCCTCCGAACCTAGGCCTGGAATCTTGGGACCTTCGG CCGGTCGGACTGCCCGACCTCCAGGACGAGTCGCCCAGATTCGTCCTGCGAGGAGAGTACGGGCGGAGTCCGGCG GACGTCCGAAGAGCCGGTGGATTATACGCCCGAGGGCGTTATGGGTCGCCAGAAAAGGGGATAGAGGACGTGGCC TGCAATTTGGTCTACCACGTCCAGGGGAGGAGTGCTCCGTTCACCAAATTCGTTTCGACGACTACTTCCAAAGAG ATGGCCATGATCTTTGCCAGCAATAACTTGGAGTTACCGGGAGAATGGTCTCGGTATGGGACGATATACATGATT GCGGCCGACTCCAAGATGATCAACGCCATCAAGTCAATACCTACGGACAAATATCCCAGTTGGTACAAGAACCAG AAGGAATTTTCCGTTGCAGGTGGAGTTCCTATGAGTCAGATAAAGGGATGGTTTGTGCCCAAGTACATGAACGGC AGAGAGATTCACTGGGGCTTCATCTTCAACGCGGACTTTGATACCGCCCATCTCGAGAACTTAAAGGACGGAGGT GCGCAACCTCAACTTGCCGGTCCAGTTGAGGGCTCCAAAGAGAGGTTGGAGAGCTACGTCAAGGACGTGGTCTTC AAGGGAGACGAGGGTGAATTCAGGCGGTTTTGGTATCCCGAGAACGATCGAGGGGCTTCTGCTGCTCCAGGGGCT TGCGCCGGACTGGGCAAAAGAGACAATGAAGCTTGCAATCAAGACGACGCGACTGAAAGCAGCAAGAATGGAGAC GAGACCAAAGGATTCTCCAGCGATATAGGTGCTGACGGCGGTGACAAAACCGTAGCTGACAACCCGGGACGGGAT TTCGAGCTCTCGGCCGAGGCAATAGCAAGAAAGGAGTTTGAGACTCTTGCAATCAAGTTCGGCATAACTGATCTG GTGTGGCACAAGTCTGCCAAAACAAAGATTTCCTTTCTGCATCAGCTGTTCACGGGGTTCAGGGGTTACGGCAAG GTCTCGACCATCTCCCGGCCCAAGATGCGGTCGCTGAGGCTGAGCTCGGGCGTCCTGGCCGTTGCGGGCCTCGGC CTCTACGTCAAGTCAGTGGTGGACGAGTTCTCGCAAGACACGAGCGCCTTGGACCGGGCTGCCGTAGTGACGTCG ATCCTCCCCTTTGTCGGTTGCGGTCTTCAGGCCGTGGCGGCTCAGAAGCACGGGATCCTCAACATCTGGGACACG GCTCTCTGTGTCGTGGGCGATGCCCTGCTGTTGAGCCCAGCGTGGCCGGTCTGGTTCCTGGTACAGGGCTTGCGA TATCTCATCGGTGCTGTCACAAGCGTGCTCTCTCCTCGTCAAGTACGGGTAAGACGAGATGAAGCGTGGCAAGCC TACCTGAGAAAAGCCAGAAACTATCTCCAGTCGGACAACTTTACCTCTGACATCGAGACGCATTTCAAGGTTGAG ATGGCGGCCGTCTTATTTGCCGCGGCAGAGGCACATGGCAAGTTGATTGCGGGAAGAGACCTTTTCCTCGTCAAT GCCTCCCATCAGCGCAGACTCACTGTCATTGAACGGACTTTGGAGACGCGCATCGGCGTTCAGGGAGACATGTGT GAGGCTATCGTAAAGAAGATGGCTGAGCTTCAGCGAGACCTACCCATCATCTTGAAGAGGTCCATGAGAGAAGAC TCGGAGAAGTTGAACGACCGGTTCGTGGCTCAGTACAGGCCCGCGAGCTACTATGCTGCCAACTCGATCAAGCTC TTCAGCACGTATATACGATCCGTCCATCCAATACCGCAACGCCATATTGTTAGTGCGGCCAGGTTGGCGGGAGAC CGGATCAGGTCCGTTCTCGAAAAGGTGTACGGAGACTCTCCGTGCAAGGTTGGCGCCCTTGGTGAACTGGCATCG GATGATGCTGCTTACAAGAAGTGGCTTCAGTTGCACAGAGACGGAGCAATCGAGCAGGAAAGAGATATAAACCAG AGTTTAAAGATTTTAAAGTGA |
| Transcript | >Ophcf2|06975 ATGAAGAGGCTCCTCTCGTTCGTTGCCCTCTTCTCACCACCTGGTCACAGTCAACTCTCTCCTCGTGGAGTTGGC TCGAGTAAACTCTCTCCTGCGGAAGAACTCATCCCTGCTCCTCCGAACCTAGGCCTGGAATCTTGGGACCTTCGG CCGGTCGGACTGCCCGACCTCCAGGACGAGTCGCCCAGATTCGTCCTGCGAGGAGAGTACGGGCGGAGTCCGGCG GACGTCCGAAGAGCCGGTGGATTATACGCCCGAGGGCGTTATGGGTCGCCAGAAAAGGGGATAGAGGACGTGGCC TGCAATTTGGTCTACCACGTCCAGGGGAGGAGTGCTCCGTTCACCAAATTCGTTTCGACGACTACTTCCAAAGAG ATGGCCATGATCTTTGCCAGCAATAACTTGGAGTTACCGGGAGAATGGTCTCGGTATGGGACGATATACATGATT GCGGCCGACTCCAAGATGATCAACGCCATCAAGTCAATACCTACGGACAAATATCCCAGTTGGTACAAGAACCAG AAGGAATTTTCCGTTGCAGGTGGAGTTCCTATGAGTCAGATAAAGGGATGGTTTGTGCCCAAGTACATGAACGGC AGAGAGATTCACTGGGGCTTCATCTTCAACGCGGACTTTGATACCGCCCATCTCGAGAACTTAAAGGACGGAGGT GCGCAACCTCAACTTGCCGGTCCAGTTGAGGGCTCCAAAGAGAGGTTGGAGAGCTACGTCAAGGACGTGGTCTTC AAGGGAGACGAGGGTGAATTCAGGCGGTTTTGGTATCCCGAGAACGATCGAGGGGCTTCTGCTGCTCCAGGGGCT TGCGCCGGACTGGGCAAAAGAGACAATGAAGCTTGCAATCAAGACGACGCGACTGAAAGCAGCAAGAATGGAGAC GAGACCAAAGGATTCTCCAGCGATATAGGTGCTGACGGCGGTGACAAAACCGTAGCTGACAACCCGGGACGGGAT TTCGAGCTCTCGGCCGAGGCAATAGCAAGAAAGGAGTTTGAGACTCTTGCAATCAAGTTCGGCATAACTGATCTG GTGTGGCACAAGTCTGCCAAAACAAAGATTTCCTTTCTGCATCAGCTGTTCACGGGGTTCAGGGGTTACGGCAAG GTCTCGACCATCTCCCGGCCCAAGATGCGGTCGCTGAGGCTGAGCTCGGGCGTCCTGGCCGTTGCGGGCCTCGGC CTCTACGTCAAGTCAGTGGTGGACGAGTTCTCGCAAGACACGAGCGCCTTGGACCGGGCTGCCGTAGTGACGTCG ATCCTCCCCTTTGTCGGTTGCGGTCTTCAGGCCGTGGCGGCTCAGAAGCACGGGATCCTCAACATCTGGGACACG GCTCTCTGTGTCGTGGGCGATGCCCTGCTGTTGAGCCCAGCGTGGCCGGTCTGGTTCCTGGTACAGGGCTTGCGA TATCTCATCGGTGCTGTCACAAGCGTGCTCTCTCCTCGTCAAGTACGGGTAAGACGAGATGAAGCGTGGCAAGCC TACCTGAGAAAAGCCAGAAACTATCTCCAGTCGGACAACTTTACCTCTGACATCGAGACGCATTTCAAGGTTGAG ATGGCGGCCGTCTTATTTGCCGCGGCAGAGGCACATGGCAAGTTGATTGCGGGAAGAGACCTTTTCCTCGTCAAT GCCTCCCATCAGCGCAGACTCACTGTCATTGAACGGACTTTGGAGACGCGCATCGGCGTTCAGGGAGACATGTGT GAGGCTATCGTAAAGAAGATGGCTGAGCTTCAGCGAGACCTACCCATCATCTTGAAGAGGTCCATGAGAGAAGAC TCGGAGAAGTTGAACGACCGGTTCGTGGCTCAGTACAGGCCCGCGAGCTACTATGCTGCCAACTCGATCAAGCTC TTCAGCACGTATATACGATCCGTCCATCCAATACCGCAACGCCATATTGTTAGTGCGGCCAGGTTGGCGGGAGAC CGGATCAGGTCCGTTCTCGAAAAGGTGTACGGAGACTCTCCGTGCAAGGTTGGCGCCCTTGGTGAACTGGCATCG GATGATGCTGCTTACAAGAAGTGGCTTCAGTTGCACAGAGACGGAGCAATCGAGCAGGAAAGAGATATAAACCAG AGTTTAAAGATTTTAAAGTGA |
| Gene | >Ophcf2|06975 ATGAAGAGGCTCCTCTCGTTCGTTGCCCTCTTCTCACCACCTGGTCACAGTCAACTCTCTCCTCGTGGAGTTGGC TCGAGTAAACTCTCTCCTGCGGAAGAACTCATCCCTGCTCCTCCGAACCTAGGCCTGGAATCTTGGGACCTTCGG CCGGTCGGACTGCCCGACCTCCAGGACGAGTCGCCCAGATTCGTCCTGCGAGGAGAGTACGGGCGGAGTCCGGCG GACGTCCGAAGAGCCGGTGGATTATACGCCCGAGGGCGTTATGGGTCGCCAGAAAAGGGGATAGAGGACGTGGCC TGCAATTTGGTCTACCACGTCCAGGGGAGGAGTGCTCCGTTCACCAAATTCGTTTCGACGACTACTTCCAAAGAG ATGGCCATGATCTTTGCCAGCAATAACTTGGAGTTACCGGGAGAATGGTCTCGGTATGGGACGATATACATGATT GCGGCCGACTCCAAGATGATCAACGCCATCAAGTCAATACCTACGGACAAATATCCCAGTTGGTACAAGAACCAG AAGGAATTTTCCGTTGCAGGTGGAGTTCCTATGAGTCAGATAAAGGGATGGTTTGTGCCCAAGTACATGAACGGC AGAGAGATTCACTGGGGCTTCATCTTCAACGCGGACTTTGATACCGCCCATCTCGAGAACTTAAAGGACGGAGGT GCGCAACCTCAACTTGCCGGTCCAGTTGAGGGCTCCAAAGAGAGGTTGGAGAGCTACGTCAAGGACGTGGTCTTC AAGGGAGACGAGGGTGAATTCAGGCGGTTTTGGTATCCCGAGAACGATCGAGGGGCTTCTGCTGCTCCAGGGGCT TGCGCCGGACTGGGCAAAAGAGACAATGAAGCTTGCAATCAAGACGACGCGACTGAAAGCAGCAAGAATGGAGAC GAGACCAAAGGATTCTCCAGCGATATAGGTGCTGACGGCGGTGACAAAACCGTAGCTGACAACCCGGGACGGGAT TTCGAGCTCTCGGCCGAGGCAATAGCAAGAAAGGAGTTTGAGACTCTTGCAATCAAGTTCGGCATAACTGATCTG GTGTGGCACAAGTCTGCCAAAACAAAGATTTCCTTTCTGCATCAGCTGTTCACGGGGTTCAGGGGTTACGGCAAG GTCTCGACCATCTCCCGGCCCAAGATGCGGTCGCTGAGGCTGAGCTCGGGCGTCCTGGCCGTTGCGGGCCTCGGC CTCTACGTCAAGTCAGTGGTGGACGAGTTCTCGCAAGACACGAGCGCCTTGGACCGGGCTGCCGTAGTGACGTCG ATCCTCCCCTTTGTCGGTTGCGGTCTTCAGGCCGTGGCGGCTCAGAAGCACGGGATCCTCAACATCTGGGACACG GCTCTCTGTGTCGTGGGCGATGCCCTGCTGTTGAGCCCAGCGTGGCCGGTCTGGTTCCTGGTACAGGGCTTGCGA TATCTCATCGGTGCTGTCACAAGCGTGCTCTCTCCTCGTCAAGTACGGGTAAGACGAGATGAAGCGTGGCAAGCC TACCTGAGAAAAGCCAGAAACTATCTCCAGTCGGACAACTTTACCTCTGACATCGAGACGCATTTCAAGGTTGAG ATGGCGGCCGTCTTATTTGCCGCGGCAGAGGCACATGGCAAGTTGATTGCGGGAAGAGACCTTTTCCTCGTCAAT GCCTCCCATCAGCGCAGACTCACTGTCATTGAACGGACTTTGGAGACGCGCATCGGCGTTCAGGGAGACATGTGT GAGGCTATCGTAAAGAAGATGGCTGAGCTTCAGCGAGACCTACCCATCATCTTGAAGAGGTCCATGAGAGAAGAC TCGGAGAAGTTGAACGACCGGTTCGTGGCTCAGTACAGGCCCGCGAGCTACTATGCTGCCAACTCGATCAAGCTC TTCAGCACGTATATACGATCCGTCCATCCAATACCGCAACGCCATATTGTTAGTGCGGCCAGGTTGGCGGGAGAC CGGATCAGGTCCGTTCTCGAAAAGGTGTACGGAGACTCTCCGTGCAAGGTTGGCGCCCTTGGTGAACTGGCATCG GATGATGCTGCTTACAAGAAGTGGCTTCAGTTGCACAGAGACGGAGCAATCGAGCAGGAAAGAGATATAAACCAG AGTTTAAAGATTTTAAAGTGA |