Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06966
Gene name
Locationscaffold_09:156684..157687
Strand-
Gene length (bp)1003
Transcript length (bp)651
Coding sequence length (bp)651
Protein length (aa) 217

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 57 79 22
2 84 106 22
3 127 146 19
4 174 196 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06966
MEASRRATHSNTRSRISRKLPPGSSLDPKPLPRQRCSRQASRSPSAASVRTDASIRAGFVLAACALAGSLLAYVV
HLWSDASGVTVPGLLAAVIALLTDSWQMMALGDPQFRLPPLTAARVTIHDAFCLGLSMGDIIMILLLKFRGDYKD
STLDLYRQAARAAYQSPPREKWLGVAVWSLTLMVTWRIYFIIGSCWDCYKKHRRGVAQGQRRRNLV*
Coding >Ophcf2|06966
ATGGAAGCATCAAGACGCGCAACCCATAGCAATACCCGGAGCCGCATCAGCAGGAAGCTCCCACCTGGCAGCAGC
CTCGACCCGAAGCCCCTCCCCCGTCAACGATGCTCGAGGCAAGCGAGCCGCTCGCCCTCTGCCGCGTCGGTCCGC
ACTGATGCCTCGATACGCGCTGGCTTCGTACTGGCAGCTTGCGCCCTTGCCGGATCTTTGCTGGCCTATGTTGTT
CATCTTTGGTCTGATGCCAGTGGTGTCACCGTTCCGGGGCTTCTTGCTGCTGTCATTGCGTTGCTCACTGATAGT
TGGCAGATGATGGCGCTTGGGGATCCGCAGTTTCGGCTTCCTCCTCTGACGGCGGCTCGCGTGACGATTCACGAT
GCCTTCTGCCTCGGACTCTCAATGGGCGACATCATCATGATCCTTCTCCTCAAATTCCGCGGCGACTATAAGGAT
TCAACGCTGGATCTGTACCGGCAGGCGGCGAGGGCGGCCTACCAATCTCCTCCGCGGGAGAAGTGGCTGGGCGTG
GCAGTCTGGTCGCTTACCCTCATGGTGACTTGGAGGATATATTTTATTATTGGCTCTTGTTGGGATTGTTATAAG
AAGCATCGGAGGGGGGTTGCGCAGGGGCAGAGACGGAGGAATCTGGTTTAG
Transcript >Ophcf2|06966
ATGGAAGCATCAAGACGCGCAACCCATAGCAATACCCGGAGCCGCATCAGCAGGAAGCTCCCACCTGGCAGCAGC
CTCGACCCGAAGCCCCTCCCCCGTCAACGATGCTCGAGGCAAGCGAGCCGCTCGCCCTCTGCCGCGTCGGTCCGC
ACTGATGCCTCGATACGCGCTGGCTTCGTACTGGCAGCTTGCGCCCTTGCCGGATCTTTGCTGGCCTATGTTGTT
CATCTTTGGTCTGATGCCAGTGGTGTCACCGTTCCGGGGCTTCTTGCTGCTGTCATTGCGTTGCTCACTGATAGT
TGGCAGATGATGGCGCTTGGGGATCCGCAGTTTCGGCTTCCTCCTCTGACGGCGGCTCGCGTGACGATTCACGAT
GCCTTCTGCCTCGGACTCTCAATGGGCGACATCATCATGATCCTTCTCCTCAAATTCCGCGGCGACTATAAGGAT
TCAACGCTGGATCTGTACCGGCAGGCGGCGAGGGCGGCCTACCAATCTCCTCCGCGGGAGAAGTGGCTGGGCGTG
GCAGTCTGGTCGCTTACCCTCATGGTGACTTGGAGGATATATTTTATTATTGGCTCTTGTTGGGATTGTTATAAG
AAGCATCGGAGGGGGGTTGCGCAGGGGCAGAGACGGAGGAATCTGGTTTAG
Gene >Ophcf2|06966
ATGGTCAGGCTCTAGTGAAGCTCCGTTCCTCACCACCCTTCCCTCCCTCCTCCTCCTCCACCACCATTTCTAGTA
GTCTTCTCCCGTCTTCTCCCTGACCTTCCAGGAAGCATCAAGGTCGGCATCGAATCCCCAACCCCATCTCAAGAT
GTCCCTCTCACCGCCCAGGCTCACATACACGCATGCAGACGCGCAACCCATAGCAATACCCGGAGCCGCATCAGC
AGGAAGCTCCCACCTGGCAGCAGCCTCGACCCGAAGCCCCTCCCCCGTCAACGATGCTCGAGGCAAGCGAGCCGC
TCGCCCTCTGCCGCGTCGGTCCGCACTGATGCCTCGATACGCGCTGGCTTCGTACTGGCAGCTTGCGCCCTTGCC
GGATCTTGTACGAGCTGTTACCCGGGCGTTGGGCTGGCTTTCGGCTCTTTGCTGTTTTCTAGTGCTGGCCTATGT
TGTTCATCTTTGGTCTGATGCCAGTGGTGTCACCGTTCCGGGGCTTCTTGCTGTGAGTTCCTCAATGTCTGTTGC
TCTTCGGGGTGGATTGGGTTTGGTGCTGACGGGAGGGGGGTTTGAGTAGGCTGTCATTGCGTTGCTCACTGATAG
TTGGCAGATGATGGCGCTTGGGGATCCGCAGTTTCGGCTTCCTCCTCTGACGGCGGCTCGCGTGACGATTCACGA
TGCCTTCTGCCTCGGACTCTCAATGGGCGACATCATCATGATCCTTCTCCTCAAATTCCGCGGCGACTATAAGGA
TTCAACGCTGGATCTGTACCGGCAGGCGGCGAGGGCGGCCTACCAATCTCCTCCGCGGGAGAAGTGGCTGGGCGT
GGCAGTCTGGTCGCTTACCCTCATGGTGTGAGTTTTTTCCCTTGCTGGCGTGTGGGGGTTTTGGCTGATGGGAGT
TAGGACTTGGAGGATATATTTTATTATTGGCTCTTGTTGGGATTGTTATAAGAAGCATCGGAGGGGGGTTGCGCA
GGGGCAGAGACGGAGGAATCTGGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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