Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06922
Gene name
Locationscaffold_08:1410718..1411744
Strand+
Gene length (bp)1026
Transcript length (bp)1026
Coding sequence length (bp)1026
Protein length (aa) 342

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 23 45 22
2 52 74 22
3 84 106 22
4 119 141 22
5 203 225 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06922
MNPEELLDATHGSNPRFGSPPWIAMIVFISIALYNVLELNFLIAYTFKKYKGLYFWSMTVATWGIAFNAVGYLLR
ILQSDPSGYGHSTLILIGWCAMVTGQSLVLYSRLHFVLQNTAVLRGILAMIIVDGVWLGVPVIVFVYGSNSSRSS
LFLRPYAVFERIQLCVFTVQELIISGLYILETSKTLNDHRRLGLASPDARHRLVHLILANVLVVLLDTSVLVLEF
TNHYDMQTAWKALVYSVKLKVEFSVLNWLVEFSKRMRTGSLEKIASTPEQKGASLNSRTVAGSDSPMGARYSVQV
GSSQSHELDGGDMCIVLTTDVAIDNSRRHSASCGESGIEQG*
Coding >Ophcf2|06922
ATGAATCCAGAGGAGCTTCTCGATGCGACTCACGGGTCGAACCCCAGATTCGGGAGTCCGCCATGGATCGCAATG
ATTGTCTTCATCAGCATTGCGCTCTACAACGTGCTGGAGCTAAACTTCCTCATCGCCTATACCTTCAAGAAATAC
AAGGGCCTGTACTTTTGGAGCATGACGGTCGCCACCTGGGGCATCGCCTTCAACGCAGTCGGCTATCTGCTGCGC
ATTCTGCAGTCGGACCCCTCGGGCTATGGCCATTCCACTCTCATCCTCATCGGCTGGTGTGCCATGGTGACGGGC
CAGTCTCTGGTGCTCTATTCGCGCCTTCACTTCGTCCTGCAAAACACGGCGGTGTTGCGTGGCATCCTGGCCATG
ATCATCGTAGATGGCGTCTGGCTGGGCGTCCCCGTCATAGTCTTCGTCTACGGCTCCAACAGCAGCAGGTCGAGC
CTCTTCTTGCGGCCGTACGCCGTCTTTGAGAGAATCCAGCTGTGCGTCTTTACCGTGCAGGAGCTCATCATATCG
GGCCTCTACATCTTGGAGACGTCCAAGACGCTCAACGACCATAGGCGACTCGGACTGGCGTCGCCCGATGCGCGT
CACCGCTTGGTTCATCTCATCCTGGCCAACGTCCTCGTAGTCCTGCTCGACACCAGCGTCCTGGTCCTCGAATTC
ACAAACCACTACGACATGCAGACGGCATGGAAGGCCTTGGTGTACAGCGTCAAGCTCAAGGTCGAGTTCAGCGTG
CTCAACTGGCTCGTCGAGTTCTCGAAGCGGATGAGGACGGGCTCTCTGGAGAAGATTGCGTCGACCCCCGAACAG
AAGGGCGCGTCCCTCAACAGCAGGACCGTGGCCGGGTCCGACTCGCCGATGGGGGCGCGATATAGTGTCCAAGTC
GGCTCCTCGCAAAGCCACGAGCTCGACGGCGGCGACATGTGCATCGTCCTGACCACCGACGTAGCCATCGACAAC
TCGAGACGGCATTCGGCTAGCTGCGGCGAGTCTGGCATTGAACAGGGCTAG
Transcript >Ophcf2|06922
ATGAATCCAGAGGAGCTTCTCGATGCGACTCACGGGTCGAACCCCAGATTCGGGAGTCCGCCATGGATCGCAATG
ATTGTCTTCATCAGCATTGCGCTCTACAACGTGCTGGAGCTAAACTTCCTCATCGCCTATACCTTCAAGAAATAC
AAGGGCCTGTACTTTTGGAGCATGACGGTCGCCACCTGGGGCATCGCCTTCAACGCAGTCGGCTATCTGCTGCGC
ATTCTGCAGTCGGACCCCTCGGGCTATGGCCATTCCACTCTCATCCTCATCGGCTGGTGTGCCATGGTGACGGGC
CAGTCTCTGGTGCTCTATTCGCGCCTTCACTTCGTCCTGCAAAACACGGCGGTGTTGCGTGGCATCCTGGCCATG
ATCATCGTAGATGGCGTCTGGCTGGGCGTCCCCGTCATAGTCTTCGTCTACGGCTCCAACAGCAGCAGGTCGAGC
CTCTTCTTGCGGCCGTACGCCGTCTTTGAGAGAATCCAGCTGTGCGTCTTTACCGTGCAGGAGCTCATCATATCG
GGCCTCTACATCTTGGAGACGTCCAAGACGCTCAACGACCATAGGCGACTCGGACTGGCGTCGCCCGATGCGCGT
CACCGCTTGGTTCATCTCATCCTGGCCAACGTCCTCGTAGTCCTGCTCGACACCAGCGTCCTGGTCCTCGAATTC
ACAAACCACTACGACATGCAGACGGCATGGAAGGCCTTGGTGTACAGCGTCAAGCTCAAGGTCGAGTTCAGCGTG
CTCAACTGGCTCGTCGAGTTCTCGAAGCGGATGAGGACGGGCTCTCTGGAGAAGATTGCGTCGACCCCCGAACAG
AAGGGCGCGTCCCTCAACAGCAGGACCGTGGCCGGGTCCGACTCGCCGATGGGGGCGCGATATAGTGTCCAAGTC
GGCTCCTCGCAAAGCCACGAGCTCGACGGCGGCGACATGTGCATCGTCCTGACCACCGACGTAGCCATCGACAAC
TCGAGACGGCATTCGGCTAGCTGCGGCGAGTCTGGCATTGAACAGGGCTAG
Gene >Ophcf2|06922
ATGAATCCAGAGGAGCTTCTCGATGCGACTCACGGGTCGAACCCCAGATTCGGGAGTCCGCCATGGATCGCAATG
ATTGTCTTCATCAGCATTGCGCTCTACAACGTGCTGGAGCTAAACTTCCTCATCGCCTATACCTTCAAGAAATAC
AAGGGCCTGTACTTTTGGAGCATGACGGTCGCCACCTGGGGCATCGCCTTCAACGCAGTCGGCTATCTGCTGCGC
ATTCTGCAGTCGGACCCCTCGGGCTATGGCCATTCCACTCTCATCCTCATCGGCTGGTGTGCCATGGTGACGGGC
CAGTCTCTGGTGCTCTATTCGCGCCTTCACTTCGTCCTGCAAAACACGGCGGTGTTGCGTGGCATCCTGGCCATG
ATCATCGTAGATGGCGTCTGGCTGGGCGTCCCCGTCATAGTCTTCGTCTACGGCTCCAACAGCAGCAGGTCGAGC
CTCTTCTTGCGGCCGTACGCCGTCTTTGAGAGAATCCAGCTGTGCGTCTTTACCGTGCAGGAGCTCATCATATCG
GGCCTCTACATCTTGGAGACGTCCAAGACGCTCAACGACCATAGGCGACTCGGACTGGCGTCGCCCGATGCGCGT
CACCGCTTGGTTCATCTCATCCTGGCCAACGTCCTCGTAGTCCTGCTCGACACCAGCGTCCTGGTCCTCGAATTC
ACAAACCACTACGACATGCAGACGGCATGGAAGGCCTTGGTGTACAGCGTCAAGCTCAAGGTCGAGTTCAGCGTG
CTCAACTGGCTCGTCGAGTTCTCGAAGCGGATGAGGACGGGCTCTCTGGAGAAGATTGCGTCGACCCCCGAACAG
AAGGGCGCGTCCCTCAACAGCAGGACCGTGGCCGGGTCCGACTCGCCGATGGGGGCGCGATATAGTGTCCAAGTC
GGCTCCTCGCAAAGCCACGAGCTCGACGGCGGCGACATGTGCATCGTCCTGACCACCGACGTAGCCATCGACAAC
TCGAGACGGCATTCGGCTAGCTGCGGCGAGTCTGGCATTGAACAGGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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