Protein ID | Ophcf2|06887 |
Gene name | |
Location | scaffold_08:1328382..1329795 |
Strand | - |
Gene length (bp) | 1413 |
Transcript length (bp) | 1257 |
Coding sequence length (bp) | 1257 |
Protein length (aa) | 419 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00226 | DnaJ | DnaJ domain | 2.9E-25 | 23 | 85 |
PF01556 | DnaJ_C | DnaJ C terminal domain | 1.3E-23 | 134 | 377 |
PF00684 | DnaJ_CXXCXGXG | DnaJ central domain | 1.1E-16 | 161 | 224 |
GO Term | Description | Terminal node |
---|---|---|
GO:0051082 | unfolded protein binding | Yes |
GO:0031072 | heat shock protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
GO:0005515 | protein binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06887 MLVRALGLLLLLALLELVVCEQDYYNILGVGKSATDKELKSAYRRLSKKYHPDKNPGDESAHENFVQVADAYNVL SDAEMRKVYDHYGHEGVKSRRQGGGGDHHHQDPFDLFSRFFGGGGHFGASSREPRGHNVEVRVEIALRDFYKGVD TEFQWDKQHICETCGGSGSADGHVDTCSVCAGRGIRIIKQQLAPGMYQQMQMRCDACAGRGQTIKHKCPVCKGAR VERKTTTVPLKVNRGVGRDARVVFENEADQSPDWVAGDLLVTLVEKPPSADDNPNKTDGNFFRRKGDDLYWTEVL SLREASMGHWSRNLTHLDSHVVRLSRPRGQVVQPGHVETMPNEGMPIYREEDDSSDPDRDAPLRFGNLYVTYEVI LPDQMESAMEKDFWALWEKWRRKKGVDLREDAGRPEAPPRDEL* |
Coding | >Ophcf2|06887 ATGCTGGTCCGCGCCCTCGGCCTGTTGCTGCTCCTCGCTCTGTTGGAGCTGGTGGTTTGCGAGCAGGACTACTAC AATATCCTAGGAGTGGGCAAGTCGGCCACGGACAAGGAACTCAAGTCGGCATACCGCAGGCTCTCAAAGAAATAT CACCCCGACAAGAACCCCGGCGACGAGTCGGCCCACGAAAACTTTGTCCAAGTAGCAGACGCCTACAATGTCCTC AGCGACGCCGAGATGCGAAAAGTATACGACCACTACGGACACGAAGGCGTCAAGTCACGACGACAAGGCGGAGGC GGCGACCACCACCACCAAGACCCCTTCGACCTCTTCAGCCGCTTCTTCGGCGGCGGCGGCCACTTCGGAGCCTCG TCGCGCGAGCCGCGAGGCCACAACGTCGAGGTCCGCGTCGAGATAGCACTACGCGACTTTTACAAGGGCGTCGAC ACCGAGTTCCAATGGGATAAGCAGCACATCTGCGAGACGTGTGGCGGCTCCGGCAGCGCAGACGGCCACGTCGAT ACTTGCAGCGTCTGCGCCGGACGCGGCATCCGCATCATCAAGCAGCAGCTCGCGCCGGGCATGTACCAGCAGATG CAGATGCGCTGCGACGCCTGCGCAGGCCGCGGCCAGACCATCAAGCACAAGTGTCCCGTCTGCAAGGGCGCCCGG GTCGAGCGCAAGACGACGACGGTGCCCCTGAAAGTCAACCGCGGAGTAGGACGCGACGCCCGAGTCGTCTTTGAG AACGAAGCCGATCAGAGTCCGGACTGGGTGGCGGGCGACCTCCTCGTCACGCTGGTGGAGAAGCCGCCTTCTGCA GACGACAACCCCAACAAGACCGACGGCAACTTCTTCCGTAGAAAGGGAGACGACCTCTACTGGACAGAAGTCCTC TCCCTCCGAGAGGCCTCCATGGGCCACTGGTCACGAAACCTCACCCACCTCGACTCCCACGTCGTGCGCCTCAGC CGGCCCCGCGGACAAGTCGTCCAACCAGGCCACGTCGAGACGATGCCCAACGAGGGCATGCCCATCTACCGCGAA GAAGACGACTCGTCGGACCCCGACCGAGACGCACCCCTCCGCTTCGGAAACCTATACGTCACCTACGAGGTCATC CTCCCAGACCAGATGGAATCCGCAATGGAGAAGGACTTTTGGGCCCTCTGGGAAAAATGGCGTAGGAAGAAGGGC GTCGACCTGCGAGAAGACGCGGGTCGTCCCGAAGCACCCCCGCGCGACGAATTATGA |
Transcript | >Ophcf2|06887 ATGCTGGTCCGCGCCCTCGGCCTGTTGCTGCTCCTCGCTCTGTTGGAGCTGGTGGTTTGCGAGCAGGACTACTAC AATATCCTAGGAGTGGGCAAGTCGGCCACGGACAAGGAACTCAAGTCGGCATACCGCAGGCTCTCAAAGAAATAT CACCCCGACAAGAACCCCGGCGACGAGTCGGCCCACGAAAACTTTGTCCAAGTAGCAGACGCCTACAATGTCCTC AGCGACGCCGAGATGCGAAAAGTATACGACCACTACGGACACGAAGGCGTCAAGTCACGACGACAAGGCGGAGGC GGCGACCACCACCACCAAGACCCCTTCGACCTCTTCAGCCGCTTCTTCGGCGGCGGCGGCCACTTCGGAGCCTCG TCGCGCGAGCCGCGAGGCCACAACGTCGAGGTCCGCGTCGAGATAGCACTACGCGACTTTTACAAGGGCGTCGAC ACCGAGTTCCAATGGGATAAGCAGCACATCTGCGAGACGTGTGGCGGCTCCGGCAGCGCAGACGGCCACGTCGAT ACTTGCAGCGTCTGCGCCGGACGCGGCATCCGCATCATCAAGCAGCAGCTCGCGCCGGGCATGTACCAGCAGATG CAGATGCGCTGCGACGCCTGCGCAGGCCGCGGCCAGACCATCAAGCACAAGTGTCCCGTCTGCAAGGGCGCCCGG GTCGAGCGCAAGACGACGACGGTGCCCCTGAAAGTCAACCGCGGAGTAGGACGCGACGCCCGAGTCGTCTTTGAG AACGAAGCCGATCAGAGTCCGGACTGGGTGGCGGGCGACCTCCTCGTCACGCTGGTGGAGAAGCCGCCTTCTGCA GACGACAACCCCAACAAGACCGACGGCAACTTCTTCCGTAGAAAGGGAGACGACCTCTACTGGACAGAAGTCCTC TCCCTCCGAGAGGCCTCCATGGGCCACTGGTCACGAAACCTCACCCACCTCGACTCCCACGTCGTGCGCCTCAGC CGGCCCCGCGGACAAGTCGTCCAACCAGGCCACGTCGAGACGATGCCCAACGAGGGCATGCCCATCTACCGCGAA GAAGACGACTCGTCGGACCCCGACCGAGACGCACCCCTCCGCTTCGGAAACCTATACGTCACCTACGAGGTCATC CTCCCAGACCAGATGGAATCCGCAATGGAGAAGGACTTTTGGGCCCTCTGGGAAAAATGGCGTAGGAAGAAGGGC GTCGACCTGCGAGAAGACGCGGGTCGTCCCGAAGCACCCCCGCGCGACGAATTATGA |
Gene | >Ophcf2|06887 ATGCTGGTCCGCGCCCTCGGCCTGTTGCTGCTCCTCGCTCTGTTGGAGCTGGTGGTTTGCGAGCAGGACTACTAC AATGTTGGTCATGTATGAGTCTGCGATGAAGGAAAGTTTCTTACCCGATTCAGATCCTAGGAGTGGGCAAGTCGG CCACGGACAAGGAACTCAAGTCGGCATACCGCAGGCTCTCAAAGAAATATCACCCCGACAAGAACCCGTACGAAA CTCCCTTCTCCCTCGTTCAAAGCTGCTCTGCCCGTTTCGCTCTCTCTCCCCACCGGCGCTCGTTCTTCGGAAGCT GATTCTCCTCTTCCTCTTTCCAGCGGCGACGAGTCGGCCCACGAAAACTTTGTCCAAGTAGCAGACGCCTACAAT GTCCTCAGCGACGCCGAGATGCGAAAAGTATACGACCACTACGGACACGAAGGCGTCAAGTCACGACGACAAGGC GGAGGCGGCGACCACCACCACCAAGACCCCTTCGACCTCTTCAGCCGCTTCTTCGGCGGCGGCGGCCACTTCGGA GCCTCGTCGCGCGAGCCGCGAGGCCACAACGTCGAGGTCCGCGTCGAGATAGCACTACGCGACTTTTACAAGGGC GTCGACACCGAGTTCCAATGGGATAAGCAGCACATCTGCGAGACGTGTGGCGGCTCCGGCAGCGCAGACGGCCAC GTCGATACTTGCAGCGTCTGCGCCGGACGCGGCATCCGCATCATCAAGCAGCAGCTCGCGCCGGGCATGTACCAG CAGATGCAGATGCGCTGCGACGCCTGCGCAGGCCGCGGCCAGACCATCAAGCACAAGTGTCCCGTCTGCAAGGGC GCCCGGGTCGAGCGCAAGACGACGACGGTGCCCCTGAAAGTCAACCGCGGAGTAGGACGCGACGCCCGAGTCGTC TTTGAGAACGAAGCCGATCAGAGTCCGGACTGGGTGGCGGGCGACCTCCTCGTCACGCTGGTGGAGAAGCCGCCT TCTGCAGACGACAACCCCAACAAGACCGACGGCAACTTCTTCCGTAGAAAGGGAGACGACCTCTACTGGACAGAA GTCCTCTCCCTCCGAGAGGCCTCCATGGGCCACTGGTCACGAAACCTCACCCACCTCGACTCCCACGTCGTGCGC CTCAGCCGGCCCCGCGGACAAGTCGTCCAACCAGGCCACGTCGAGACGATGCCCAACGAGGGCATGCCCATCTAC CGCGAAGAAGACGACTCGTCGGACCCCGACCGAGACGCACCCCTCCGCTTCGGAAACCTATACGTCACCTACGAG GTCATCCTCCCAGACCAGATGGAATCCGCAATGGAGAAGGACTTTTGGGCCCTCTGGGAAAAATGGCGTAGGAAG AAGGGCGTCGACCTGCGAGAAGACGCGGGTCGTCCCGAAGCACCCCCGCGCGACGAATTATGA |