Protein ID | Ophcf2|06884 |
Gene name | |
Location | scaffold_08:1318240..1319670 |
Strand | - |
Gene length (bp) | 1430 |
Transcript length (bp) | 1377 |
Coding sequence length (bp) | 1377 |
Protein length (aa) | 459 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 435 | 457 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06884 MYRLTTSVIAGLAAVNGALAFGGPDACHQDGYPASGPNYPCNEVQEWNVRCNNIKNLKTHQACICEPWHKDNVEG CSSCKLKHGIDGPQGIKYWEAVNDKALQGYCKLEKPDKKYPEFWAEVQNLAGPPPMHSNDGNLPNNVLGKDISVG RYYTPKVPKPDVSKYSCNDTAPTGTAKVPEFSVVAVATQTATPAPSATAMAAPKYKSNNSSVVVEAKAAVSAKLS LVSIGYKCDAKVNGREGVHWDCSSPYRINNPKIEAVAYAKIEASIAVNLLDASFCGCVPNQLITGENFKLENKIE GRAGYTVLKPSKDNKEILRPRSPFPPAAVAKVEAKAEAHATVSGSSEAHAEAKASASVTIATQGDCKVYVPASSV QNGKVIADGKPAALPHTVPKAPAPAPAPATTSAGIPAARPAGTGAPIVPTSPKVAPPADIISGAAAMTVPALALA AGILVAAF* |
Coding | >Ophcf2|06884 ATGTACAGACTCACCACCTCCGTAATCGCCGGCCTGGCTGCCGTCAACGGTGCTCTCGCCTTTGGCGGTCCCGAT GCCTGCCACCAGGACGGCTACCCGGCTTCGGGCCCCAACTACCCCTGCAACGAGGTTCAGGAGTGGAACGTCCGG TGCAACAATATCAAGAACCTCAAGACGCATCAGGCCTGCATCTGCGAGCCCTGGCACAAGGATAACGTCGAGGGT TGCAGCTCGTGCAAGCTCAAGCACGGCATCGACGGTCCCCAAGGCATCAAGTACTGGGAAGCCGTCAACGACAAG GCCCTCCAAGGATACTGCAAGCTGGAGAAGCCCGACAAGAAATACCCCGAGTTCTGGGCAGAGGTGCAGAACCTG GCCGGTCCGCCCCCGATGCACTCTAACGACGGCAACTTGCCCAACAACGTCCTCGGCAAAGACATCAGCGTCGGA CGTTACTACACGCCCAAGGTCCCCAAGCCGGACGTGTCCAAGTACAGCTGCAACGACACCGCCCCGACCGGAACC GCAAAGGTCCCCGAGTTCTCCGTCGTCGCCGTGGCCACCCAGACGGCGACTCCGGCCCCGTCGGCCACCGCCATG GCCGCTCCCAAGTACAAGAGCAACAACTCGTCCGTGGTTGTAGAGGCCAAGGCCGCCGTCTCCGCCAAGCTCTCT CTCGTCTCCATCGGATACAAGTGCGACGCCAAGGTCAACGGACGTGAAGGCGTTCACTGGGACTGTTCCAGCCCG TACCGCATCAACAACCCCAAGATCGAGGCCGTGGCTTACGCCAAGATCGAGGCCAGTATCGCGGTCAACTTGCTG GATGCCAGCTTCTGCGGCTGCGTTCCTAACCAGCTCATCACCGGCGAGAACTTCAAGCTCGAGAACAAGATCGAG GGTCGTGCTGGATACACGGTCCTGAAGCCTTCCAAGGATAACAAGGAGATTCTCCGCCCCCGGTCTCCCTTCCCC CCGGCCGCCGTTGCCAAGGTCGAGGCCAAGGCCGAGGCTCATGCCACCGTCTCCGGCTCTTCCGAAGCCCACGCC GAGGCCAAAGCCTCTGCTTCCGTCACCATCGCCACTCAGGGAGACTGCAAGGTCTACGTCCCGGCTTCCAGCGTC CAGAACGGCAAAGTCATCGCCGACGGTAAACCCGCCGCTCTCCCGCATACCGTTCCCAAGGCCCCGGCTCCGGCC CCGGCTCCGGCCACTACCTCCGCCGGCATCCCGGCTGCTCGCCCGGCCGGCACCGGCGCTCCTATCGTGCCCACC AGCCCCAAGGTTGCGCCCCCTGCCGACATCATCAGCGGCGCTGCTGCCATGACGGTGCCTGCTCTGGCTCTTGCC GCTGGCATCTTGGTCGCTGCCTTTTAA |
Transcript | >Ophcf2|06884 ATGTACAGACTCACCACCTCCGTAATCGCCGGCCTGGCTGCCGTCAACGGTGCTCTCGCCTTTGGCGGTCCCGAT GCCTGCCACCAGGACGGCTACCCGGCTTCGGGCCCCAACTACCCCTGCAACGAGGTTCAGGAGTGGAACGTCCGG TGCAACAATATCAAGAACCTCAAGACGCATCAGGCCTGCATCTGCGAGCCCTGGCACAAGGATAACGTCGAGGGT TGCAGCTCGTGCAAGCTCAAGCACGGCATCGACGGTCCCCAAGGCATCAAGTACTGGGAAGCCGTCAACGACAAG GCCCTCCAAGGATACTGCAAGCTGGAGAAGCCCGACAAGAAATACCCCGAGTTCTGGGCAGAGGTGCAGAACCTG GCCGGTCCGCCCCCGATGCACTCTAACGACGGCAACTTGCCCAACAACGTCCTCGGCAAAGACATCAGCGTCGGA CGTTACTACACGCCCAAGGTCCCCAAGCCGGACGTGTCCAAGTACAGCTGCAACGACACCGCCCCGACCGGAACC GCAAAGGTCCCCGAGTTCTCCGTCGTCGCCGTGGCCACCCAGACGGCGACTCCGGCCCCGTCGGCCACCGCCATG GCCGCTCCCAAGTACAAGAGCAACAACTCGTCCGTGGTTGTAGAGGCCAAGGCCGCCGTCTCCGCCAAGCTCTCT CTCGTCTCCATCGGATACAAGTGCGACGCCAAGGTCAACGGACGTGAAGGCGTTCACTGGGACTGTTCCAGCCCG TACCGCATCAACAACCCCAAGATCGAGGCCGTGGCTTACGCCAAGATCGAGGCCAGTATCGCGGTCAACTTGCTG GATGCCAGCTTCTGCGGCTGCGTTCCTAACCAGCTCATCACCGGCGAGAACTTCAAGCTCGAGAACAAGATCGAG GGTCGTGCTGGATACACGGTCCTGAAGCCTTCCAAGGATAACAAGGAGATTCTCCGCCCCCGGTCTCCCTTCCCC CCGGCCGCCGTTGCCAAGGTCGAGGCCAAGGCCGAGGCTCATGCCACCGTCTCCGGCTCTTCCGAAGCCCACGCC GAGGCCAAAGCCTCTGCTTCCGTCACCATCGCCACTCAGGGAGACTGCAAGGTCTACGTCCCGGCTTCCAGCGTC CAGAACGGCAAAGTCATCGCCGACGGTAAACCCGCCGCTCTCCCGCATACCGTTCCCAAGGCCCCGGCTCCGGCC CCGGCTCCGGCCACTACCTCCGCCGGCATCCCGGCTGCTCGCCCGGCCGGCACCGGCGCTCCTATCGTGCCCACC AGCCCCAAGGTTGCGCCCCCTGCCGACATCATCAGCGGCGCTGCTGCCATGACGGTGCCTGCTCTGGCTCTTGCC GCTGGCATCTTGGTCGCTGCCTTTTAA |
Gene | >Ophcf2|06884 ATGTACAGACTCACCACCTCCGTAATCGCCGGCCTGGCTGCCGTCAACGGTGCTCTCGCCTTTGGCGGTCCCGAT GCCTGCCACCAGGACGGCTACCCGGCTTCGGGCCCCAACTACCCCTGCAACGAGGTTCAGGAGTGGAACGTCCGG TGCAACAATATCAAGAACCTCAAGACGCATCAGGCCTGCATCTGCGAGCCCTGGCACAAGGATAACGTCGAGGGT TGCAGCTCGTGCAAGCTCAAGCACGGCATCGACGGTCCCCAAGGCATCAAGTACTGGGAAGCCGTCAACGACAAG GCCCTCCAAGGATACTGCAAGCTGGAGAAGCCCGACAAGAAATACCCCGAGTTCTGGGCAGAGGTGCAGAACCTG GCCGGTCCGCCCCCGATGCACTCTAACGACGGCAACTTGCCCAACAACGTCCTCGGCAAAGACATCAGCGTCGGA CGTTACTACACGCCCAAGGTCCCCAAGCCGGACGTGTCCAAGTACAGCTGCAACGACACCGCCCCGACCGGAACC GCAAAGGTCCCCGAGTTCTCCGTCGTCGCCGTGGCCACCCAGACGGCGACTCCGGCCCCGTCGGCCACCGCCATG GCCGCTCCCAAGTACAAGAGCAACAACTCGTCCGTGGTTGTAGAGGCCAAGGCCGCCGTCTCCGCCAAGCTCTCT CTCGTCTCCATCGGATACAAGTGCGACGCCAAGGTCAACGGACGTGAAGGCGTTCACTGGGACTGTTCCAGCCCG TACCGCATCAACAACCCCAAGATCGAGGCCGTGGCTTACGCCAAGATCGAGGCCAGTATCGCGGTCAACTTGCTG GATGCCAGCTTCTGCGGCTGCGTTCCTAACCAGCTCATCACCGGCGAGAACTTCAAGCTCGAGAACAAGATCGAG GGTCGTGCTGGATACACGGTCCTGAAGCCTTCCAAGGATAACAAGGAGATTGTTGTCGACAAGCAGGTCCAGGCC GATAAGCCCCGTCCTGGTGCCGGCCCCAGCTCCGCCCCCGGTCTCCCTTCCCCCCGGCCGCCGTTGCCAAGGTCG AGGCCAAGGCCGAGGCTCATGCCACCGTCTCCGGCTCTTCCGAAGCCCACGCCGAGGCCAAAGCCTCTGCTTCCG TCACCATCGCCACTCAGGGAGACTGCAAGGTCTACGTCCCGGCTTCCAGCGTCCAGAACGGCAAAGTCATCGCCG ACGGTAAACCCGCCGCTCTCCCGCATACCGTTCCCAAGGCCCCGGCTCCGGCCCCGGCTCCGGCCACTACCTCCG CCGGCATCCCGGCTGCTCGCCCGGCCGGCACCGGCGCTCCTATCGTGCCCACCAGCCCCAAGGTTGCGCCCCCTG CCGACATCATCAGCGGCGCTGCTGCCATGACGGTGCCTGCTCTGGCTCTTGCCGCTGGCATCTTGGTCGCTGCCT TTTAA |