Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06884
Gene name
Locationscaffold_08:1318240..1319670
Strand-
Gene length (bp)1430
Transcript length (bp)1377
Coding sequence length (bp)1377
Protein length (aa) 459

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 435 457 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06884
MYRLTTSVIAGLAAVNGALAFGGPDACHQDGYPASGPNYPCNEVQEWNVRCNNIKNLKTHQACICEPWHKDNVEG
CSSCKLKHGIDGPQGIKYWEAVNDKALQGYCKLEKPDKKYPEFWAEVQNLAGPPPMHSNDGNLPNNVLGKDISVG
RYYTPKVPKPDVSKYSCNDTAPTGTAKVPEFSVVAVATQTATPAPSATAMAAPKYKSNNSSVVVEAKAAVSAKLS
LVSIGYKCDAKVNGREGVHWDCSSPYRINNPKIEAVAYAKIEASIAVNLLDASFCGCVPNQLITGENFKLENKIE
GRAGYTVLKPSKDNKEILRPRSPFPPAAVAKVEAKAEAHATVSGSSEAHAEAKASASVTIATQGDCKVYVPASSV
QNGKVIADGKPAALPHTVPKAPAPAPAPATTSAGIPAARPAGTGAPIVPTSPKVAPPADIISGAAAMTVPALALA
AGILVAAF*
Coding >Ophcf2|06884
ATGTACAGACTCACCACCTCCGTAATCGCCGGCCTGGCTGCCGTCAACGGTGCTCTCGCCTTTGGCGGTCCCGAT
GCCTGCCACCAGGACGGCTACCCGGCTTCGGGCCCCAACTACCCCTGCAACGAGGTTCAGGAGTGGAACGTCCGG
TGCAACAATATCAAGAACCTCAAGACGCATCAGGCCTGCATCTGCGAGCCCTGGCACAAGGATAACGTCGAGGGT
TGCAGCTCGTGCAAGCTCAAGCACGGCATCGACGGTCCCCAAGGCATCAAGTACTGGGAAGCCGTCAACGACAAG
GCCCTCCAAGGATACTGCAAGCTGGAGAAGCCCGACAAGAAATACCCCGAGTTCTGGGCAGAGGTGCAGAACCTG
GCCGGTCCGCCCCCGATGCACTCTAACGACGGCAACTTGCCCAACAACGTCCTCGGCAAAGACATCAGCGTCGGA
CGTTACTACACGCCCAAGGTCCCCAAGCCGGACGTGTCCAAGTACAGCTGCAACGACACCGCCCCGACCGGAACC
GCAAAGGTCCCCGAGTTCTCCGTCGTCGCCGTGGCCACCCAGACGGCGACTCCGGCCCCGTCGGCCACCGCCATG
GCCGCTCCCAAGTACAAGAGCAACAACTCGTCCGTGGTTGTAGAGGCCAAGGCCGCCGTCTCCGCCAAGCTCTCT
CTCGTCTCCATCGGATACAAGTGCGACGCCAAGGTCAACGGACGTGAAGGCGTTCACTGGGACTGTTCCAGCCCG
TACCGCATCAACAACCCCAAGATCGAGGCCGTGGCTTACGCCAAGATCGAGGCCAGTATCGCGGTCAACTTGCTG
GATGCCAGCTTCTGCGGCTGCGTTCCTAACCAGCTCATCACCGGCGAGAACTTCAAGCTCGAGAACAAGATCGAG
GGTCGTGCTGGATACACGGTCCTGAAGCCTTCCAAGGATAACAAGGAGATTCTCCGCCCCCGGTCTCCCTTCCCC
CCGGCCGCCGTTGCCAAGGTCGAGGCCAAGGCCGAGGCTCATGCCACCGTCTCCGGCTCTTCCGAAGCCCACGCC
GAGGCCAAAGCCTCTGCTTCCGTCACCATCGCCACTCAGGGAGACTGCAAGGTCTACGTCCCGGCTTCCAGCGTC
CAGAACGGCAAAGTCATCGCCGACGGTAAACCCGCCGCTCTCCCGCATACCGTTCCCAAGGCCCCGGCTCCGGCC
CCGGCTCCGGCCACTACCTCCGCCGGCATCCCGGCTGCTCGCCCGGCCGGCACCGGCGCTCCTATCGTGCCCACC
AGCCCCAAGGTTGCGCCCCCTGCCGACATCATCAGCGGCGCTGCTGCCATGACGGTGCCTGCTCTGGCTCTTGCC
GCTGGCATCTTGGTCGCTGCCTTTTAA
Transcript >Ophcf2|06884
ATGTACAGACTCACCACCTCCGTAATCGCCGGCCTGGCTGCCGTCAACGGTGCTCTCGCCTTTGGCGGTCCCGAT
GCCTGCCACCAGGACGGCTACCCGGCTTCGGGCCCCAACTACCCCTGCAACGAGGTTCAGGAGTGGAACGTCCGG
TGCAACAATATCAAGAACCTCAAGACGCATCAGGCCTGCATCTGCGAGCCCTGGCACAAGGATAACGTCGAGGGT
TGCAGCTCGTGCAAGCTCAAGCACGGCATCGACGGTCCCCAAGGCATCAAGTACTGGGAAGCCGTCAACGACAAG
GCCCTCCAAGGATACTGCAAGCTGGAGAAGCCCGACAAGAAATACCCCGAGTTCTGGGCAGAGGTGCAGAACCTG
GCCGGTCCGCCCCCGATGCACTCTAACGACGGCAACTTGCCCAACAACGTCCTCGGCAAAGACATCAGCGTCGGA
CGTTACTACACGCCCAAGGTCCCCAAGCCGGACGTGTCCAAGTACAGCTGCAACGACACCGCCCCGACCGGAACC
GCAAAGGTCCCCGAGTTCTCCGTCGTCGCCGTGGCCACCCAGACGGCGACTCCGGCCCCGTCGGCCACCGCCATG
GCCGCTCCCAAGTACAAGAGCAACAACTCGTCCGTGGTTGTAGAGGCCAAGGCCGCCGTCTCCGCCAAGCTCTCT
CTCGTCTCCATCGGATACAAGTGCGACGCCAAGGTCAACGGACGTGAAGGCGTTCACTGGGACTGTTCCAGCCCG
TACCGCATCAACAACCCCAAGATCGAGGCCGTGGCTTACGCCAAGATCGAGGCCAGTATCGCGGTCAACTTGCTG
GATGCCAGCTTCTGCGGCTGCGTTCCTAACCAGCTCATCACCGGCGAGAACTTCAAGCTCGAGAACAAGATCGAG
GGTCGTGCTGGATACACGGTCCTGAAGCCTTCCAAGGATAACAAGGAGATTCTCCGCCCCCGGTCTCCCTTCCCC
CCGGCCGCCGTTGCCAAGGTCGAGGCCAAGGCCGAGGCTCATGCCACCGTCTCCGGCTCTTCCGAAGCCCACGCC
GAGGCCAAAGCCTCTGCTTCCGTCACCATCGCCACTCAGGGAGACTGCAAGGTCTACGTCCCGGCTTCCAGCGTC
CAGAACGGCAAAGTCATCGCCGACGGTAAACCCGCCGCTCTCCCGCATACCGTTCCCAAGGCCCCGGCTCCGGCC
CCGGCTCCGGCCACTACCTCCGCCGGCATCCCGGCTGCTCGCCCGGCCGGCACCGGCGCTCCTATCGTGCCCACC
AGCCCCAAGGTTGCGCCCCCTGCCGACATCATCAGCGGCGCTGCTGCCATGACGGTGCCTGCTCTGGCTCTTGCC
GCTGGCATCTTGGTCGCTGCCTTTTAA
Gene >Ophcf2|06884
ATGTACAGACTCACCACCTCCGTAATCGCCGGCCTGGCTGCCGTCAACGGTGCTCTCGCCTTTGGCGGTCCCGAT
GCCTGCCACCAGGACGGCTACCCGGCTTCGGGCCCCAACTACCCCTGCAACGAGGTTCAGGAGTGGAACGTCCGG
TGCAACAATATCAAGAACCTCAAGACGCATCAGGCCTGCATCTGCGAGCCCTGGCACAAGGATAACGTCGAGGGT
TGCAGCTCGTGCAAGCTCAAGCACGGCATCGACGGTCCCCAAGGCATCAAGTACTGGGAAGCCGTCAACGACAAG
GCCCTCCAAGGATACTGCAAGCTGGAGAAGCCCGACAAGAAATACCCCGAGTTCTGGGCAGAGGTGCAGAACCTG
GCCGGTCCGCCCCCGATGCACTCTAACGACGGCAACTTGCCCAACAACGTCCTCGGCAAAGACATCAGCGTCGGA
CGTTACTACACGCCCAAGGTCCCCAAGCCGGACGTGTCCAAGTACAGCTGCAACGACACCGCCCCGACCGGAACC
GCAAAGGTCCCCGAGTTCTCCGTCGTCGCCGTGGCCACCCAGACGGCGACTCCGGCCCCGTCGGCCACCGCCATG
GCCGCTCCCAAGTACAAGAGCAACAACTCGTCCGTGGTTGTAGAGGCCAAGGCCGCCGTCTCCGCCAAGCTCTCT
CTCGTCTCCATCGGATACAAGTGCGACGCCAAGGTCAACGGACGTGAAGGCGTTCACTGGGACTGTTCCAGCCCG
TACCGCATCAACAACCCCAAGATCGAGGCCGTGGCTTACGCCAAGATCGAGGCCAGTATCGCGGTCAACTTGCTG
GATGCCAGCTTCTGCGGCTGCGTTCCTAACCAGCTCATCACCGGCGAGAACTTCAAGCTCGAGAACAAGATCGAG
GGTCGTGCTGGATACACGGTCCTGAAGCCTTCCAAGGATAACAAGGAGATTGTTGTCGACAAGCAGGTCCAGGCC
GATAAGCCCCGTCCTGGTGCCGGCCCCAGCTCCGCCCCCGGTCTCCCTTCCCCCCGGCCGCCGTTGCCAAGGTCG
AGGCCAAGGCCGAGGCTCATGCCACCGTCTCCGGCTCTTCCGAAGCCCACGCCGAGGCCAAAGCCTCTGCTTCCG
TCACCATCGCCACTCAGGGAGACTGCAAGGTCTACGTCCCGGCTTCCAGCGTCCAGAACGGCAAAGTCATCGCCG
ACGGTAAACCCGCCGCTCTCCCGCATACCGTTCCCAAGGCCCCGGCTCCGGCCCCGGCTCCGGCCACTACCTCCG
CCGGCATCCCGGCTGCTCGCCCGGCCGGCACCGGCGCTCCTATCGTGCCCACCAGCCCCAAGGTTGCGCCCCCTG
CCGACATCATCAGCGGCGCTGCTGCCATGACGGTGCCTGCTCTGGCTCTTGCCGCTGGCATCTTGGTCGCTGCCT
TTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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