Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06835
Gene name
Locationscaffold_08:1176176..1177476
Strand+
Gene length (bp)1300
Transcript length (bp)987
Coding sequence length (bp)987
Protein length (aa) 329

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00230 MIP Major intrinsic protein 4.4E-52 42 280

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0015267 channel activity Yes
GO:0005575 cellular_component No
GO:0022803 passive transmembrane transporter activity No
GO:0051179 localization No
GO:0022857 transmembrane transporter activity No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.5

Transmembrane Domains

Domain # Start End Length
1 48 70 22
2 77 99 22
3 119 141 22
4 179 198 19
5 213 235 22
6 242 264 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06835
MAPPNKHQDGAKCEAEPPPTQVQMHEAARSGLLWPRIRAWGRDGFSEFVGTMVLILFGDGVVAQVVLSNGTKGDY
QSISWGWGIGVMLGVYCAGKSGGHINPAVTLSNCVFRGFPWRKFPVYAAAQVLGAMAGALIVYGNYKLAIDHFEG
GTGLRSVSGPNATAGIFCTYPAPFMTRTGMFFSEFIASSILQFVIFALTDAENLAAGPLLPLALLFLIFGIGACF
GWETGYAINLARDFGPRLVSYMVGYGSEVWSAGGYYFWIPMVAPFLGTLTGGAVYDLLVYTGESPINSPWLGLDR
LFRARPSNGSGRRAKSLEPSNSHETSNV*
Coding >Ophcf2|06835
ATGGCGCCACCGAATAAGCATCAAGATGGAGCAAAGTGCGAGGCCGAGCCGCCGCCGACGCAGGTGCAGATGCAC
GAGGCGGCGCGAAGCGGGCTGCTCTGGCCGCGGATCCGCGCCTGGGGACGGGATGGCTTTTCCGAGTTCGTCGGC
ACCATGGTGCTGATTCTGTTTGGGGACGGTGTTGTGGCTCAGGTTGTGTTGAGCAATGGGACCAAGGGGGATTAT
CAGAGTATATCTTGGGGCTGGGGAATCGGCGTCATGCTAGGCGTCTACTGCGCCGGCAAGTCCGGCGGCCACATC
AACCCAGCCGTAACACTCTCCAACTGCGTCTTCCGCGGCTTCCCCTGGCGCAAGTTCCCCGTCTACGCCGCCGCC
CAGGTTCTAGGCGCCATGGCCGGCGCCCTCATCGTCTACGGAAACTACAAGTTGGCCATCGACCACTTCGAAGGC
GGTACGGGCCTCCGCTCCGTGTCCGGTCCCAACGCCACCGCCGGCATCTTCTGCACGTACCCGGCGCCCTTTATG
ACCCGCACCGGCATGTTCTTCTCCGAGTTTATCGCCAGCTCCATCCTGCAGTTTGTCATCTTCGCCCTTACCGAT
GCTGAGAACTTGGCGGCCGGTCCGCTTCTTCCGCTGGCCCTGCTGTTTCTCATCTTTGGCATCGGTGCTTGCTTC
GGTTGGGAGACGGGCTATGCCATCAACTTGGCTCGTGACTTTGGTCCGCGTCTGGTTTCGTACATGGTCGGGTAC
GGCTCCGAGGTCTGGTCCGCTGGAGGATACTACTTTTGGATCCCGATGGTGGCTCCCTTTCTCGGCACGCTGACG
GGGGGTGCCGTGTACGACCTCTTGGTGTACACGGGCGAGAGCCCCATCAACTCGCCCTGGCTCGGCCTCGATCGC
CTGTTCCGGGCCCGACCTAGCAATGGTAGCGGTCGGCGGGCCAAGTCTCTGGAGCCGAGTAACTCTCACGAGACC
AGCAACGTCTGA
Transcript >Ophcf2|06835
ATGGCGCCACCGAATAAGCATCAAGATGGAGCAAAGTGCGAGGCCGAGCCGCCGCCGACGCAGGTGCAGATGCAC
GAGGCGGCGCGAAGCGGGCTGCTCTGGCCGCGGATCCGCGCCTGGGGACGGGATGGCTTTTCCGAGTTCGTCGGC
ACCATGGTGCTGATTCTGTTTGGGGACGGTGTTGTGGCTCAGGTTGTGTTGAGCAATGGGACCAAGGGGGATTAT
CAGAGTATATCTTGGGGCTGGGGAATCGGCGTCATGCTAGGCGTCTACTGCGCCGGCAAGTCCGGCGGCCACATC
AACCCAGCCGTAACACTCTCCAACTGCGTCTTCCGCGGCTTCCCCTGGCGCAAGTTCCCCGTCTACGCCGCCGCC
CAGGTTCTAGGCGCCATGGCCGGCGCCCTCATCGTCTACGGAAACTACAAGTTGGCCATCGACCACTTCGAAGGC
GGTACGGGCCTCCGCTCCGTGTCCGGTCCCAACGCCACCGCCGGCATCTTCTGCACGTACCCGGCGCCCTTTATG
ACCCGCACCGGCATGTTCTTCTCCGAGTTTATCGCCAGCTCCATCCTGCAGTTTGTCATCTTCGCCCTTACCGAT
GCTGAGAACTTGGCGGCCGGTCCGCTTCTTCCGCTGGCCCTGCTGTTTCTCATCTTTGGCATCGGTGCTTGCTTC
GGTTGGGAGACGGGCTATGCCATCAACTTGGCTCGTGACTTTGGTCCGCGTCTGGTTTCGTACATGGTCGGGTAC
GGCTCCGAGGTCTGGTCCGCTGGAGGATACTACTTTTGGATCCCGATGGTGGCTCCCTTTCTCGGCACGCTGACG
GGGGGTGCCGTGTACGACCTCTTGGTGTACACGGGCGAGAGCCCCATCAACTCGCCCTGGCTCGGCCTCGATCGC
CTGTTCCGGGCCCGACCTAGCAATGGTAGCGGTCGGCGGGCCAAGTCTCTGGAGCCGAGTAACTCTCACGAGACC
AGCAACGTCTGA
Gene >Ophcf2|06835
ATGGCGCCACCGAATAAGCATCAAGATGGAGCAAAGTGCGAGGCCGAGCCGCCGCCGACGCAGGTGCAGATGCAC
GAGGCGGCGCGAAGCGGGCTGCTCTGGCCGCGGATCCGCGCCTGGGGACGGGATGGCTTTTCCGAGTTCGTCGGC
ACCATGGTGCTGATTCTGTTTGGGGACGGTGTTGTGGCTCAGGTTGTGTTGAGCAATGGGACCAAGGGGGATTAT
CAGAGTATATCTTGGGGCTGGGGGTGAGTTTTTTATATCTTTCTGCTTGTTTATGACTTTGACCTCTCTCTATGC
CTTTTTGTTACTCGTCCACGTTTCCCGTCTTTTGCCCTCTCCGAGCCTCTTCTCTCTTCATCACTCCCCTCCATC
ACTTCCCTTGATTCTTTCATTGCCTCTTGTCTGCCCTATCCATCCGTCTCCCTATCACTTCTCTCATCATTCACC
TCTCCCCCTCTTTTTCATCAATCATCCCTCTCCCCCCCCATCATGCTCACATCCCCAGAATCGGCGTCATGCTAG
GCGTCTACTGCGCCGGCAAGTCCGGCGGCCACATCAACCCAGCCGTAACACTCTCCAACTGCGTCTTCCGCGGCT
TCCCCTGGCGCAAGTTCCCCGTCTACGCCGCCGCCCAGGTTCTAGGCGCCATGGCCGGCGCCCTCATCGTCTACG
GAAACTACAAGTTGGCCATCGACCACTTCGAAGGCGGTACGGGCCTCCGCTCCGTGTCCGGTCCCAACGCCACCG
CCGGCATCTTCTGCACGTACCCGGCGCCCTTTATGACCCGCACCGGCATGTTCTTCTCCGAGTTTATCGCCAGCT
CCATCCTGCAGTTTGTCATCTTCGCCCTTACCGATGCTGAGAACTTGGCGGCCGGTCCGCTTCTTCCGCTGGCCC
TGCTGTTTCTCATCTTTGGCATCGGTGCTTGCTTCGGTTGGGAGACGGGCTATGCCATCAACTTGGCTCGTGACT
TTGGTCCGCGTCTGGTTTCGTACATGGTCGGGTACGGCTCCGAGGTCTGGTCCGCTGGAGGATACTACTTTTGGG
TGAGCCCCCTTTTGCTCTTCAGCTTGCTCCCTCCCTGACACGTCTCGTCAAGATCCCGATGGTGGCTCCCTTTCT
CGGCACGCTGACGGGGGGTGCCGTGTACGACCTCTTGGTGTACACGGGCGAGAGCCCCATCAACTCGCCCTGGCT
CGGCCTCGATCGCCTGTTCCGGGCCCGACCTAGCAATGGTAGCGGTCGGCGGGCCAAGTCTCTGGAGCCGAGTAA
CTCTCACGAGACCAGCAACGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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