Protein ID | Ophcf2|06828 |
Gene name | |
Location | scaffold_08:1155810..1158602 |
Strand | - |
Gene length (bp) | 2792 |
Transcript length (bp) | 2556 |
Coding sequence length (bp) | 2556 |
Protein length (aa) | 852 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00443 | UCH | Ubiquitin carboxyl-terminal hydrolase | 6.1E-44 | 401 | 760 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016579 | protein deubiquitination | Yes |
GO:0004843 | cysteine-type deubiquitinase activity | Yes |
GO:0044238 | primary metabolic process | No |
GO:0036211 | protein modification process | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0140096 | catalytic activity, acting on a protein | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0070647 | protein modification by small protein conjugation or removal | No |
GO:0070646 | protein modification by small protein removal | No |
GO:0003824 | catalytic activity | No |
GO:0008234 | cysteine-type peptidase activity | No |
GO:0019538 | protein metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0016787 | hydrolase activity | No |
GO:0003674 | molecular_function | No |
GO:0008233 | peptidase activity | No |
GO:0019783 | ubiquitin-like protein peptidase activity | No |
GO:0043412 | macromolecule modification | No |
GO:0101005 | deubiquitinase activity | No |
GO:0008150 | biological_process | No |
GO:0006508 | proteolysis | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06828 MSGGGPGPGPGGGPGPGPRRRGQPQYGPPYHHQHHHHHHHHQQMVYGGYIPYAHQGYYGMPPQFQNGAMPSPAYV TYPGYTRSPPSMPQYVPLVGVSTSSTYPARHSPSLSTAYQPPPAPASIPPHTPSSSHSSQILHPPTPPTPQTADH GSTGPSPSLQLEGSLEQRESFRPPIPWYSCAESDFPIKTPRSKRRRKPLTADGVTLSLPLEKHASLAEQSAPSPS EVITSSDLASKTSHPKSGPPTPQAGLPVLSGATTGDAAPATVDRPAIPAVPVIPAVPRTMSKASGAAEIKKQAAD ASKISNGATSTACAESAPVSPPPRLAPTSWANLFSKPAVKEPSAASEANGSSTANGPVSPAVTAPAPGRAFSKSN ATLLAEAIRAYRVGGTDTVPFLEPRGLINTGNMCYMNSVLQVLIFCTPFFDFLDQVSKRAAYSFKSETPLIDAMI MFLHEYKVLASAPTTSLLRRKLKSDDLEKYGEPFTPEFVYEAIRQLPRFASMRRGHQQDAEEFLGFLLQSLDDEC TKVLSSLPSTDSDTASVDMAASQTPAANSPGDWLEVGRKQRAAVTRSSGSNSSTPVTKIFGGLLRSEFRVPGLKD SITTEPYQPLQLDIGSPDVRNVIDALRGLTRPERLQGDFNSPRGKDVTATKQVFIESLPPVLILHLKRFQFDAEG HGTIKVWKKIGYPLELEIPREAVSRQKRHSMGDGAMPKYRLVSVVYHHGRNASGGHYTVDVRRQDGLEWIRMDDT VLRRVRSEDVAEGGSEEDPREGRKDGGMGASANRFGVIDDEEAGDDDEGWKQVTASASGSKRWSSVVNGNSGNGN IDDKQQLMKESLKDSKVAYLLFYQRM* |
Coding | >Ophcf2|06828 ATGAGCGGAGGAGGCCCCGGCCCAGGACCCGGCGGAGGCCCCGGCCCAGGCCCGCGGCGGAGGGGGCAGCCTCAG TACGGGCCGCCGTATCATCACCAGCACCACCATCATCATCATCATCACCAGCAGATGGTCTATGGCGGCTACATC CCTTACGCCCACCAGGGCTACTATGGCATGCCCCCTCAGTTTCAAAATGGTGCCATGCCCTCTCCAGCCTACGTC ACCTACCCGGGCTACACCAGGTCGCCGCCCTCGATGCCCCAGTACGTTCCCTTGGTAGGCGTCAGCACTTCGTCC ACCTACCCTGCCCGCCATTCGCCCAGTCTCTCTACCGCCTACCAGCCTCCCCCAGCTCCGGCTTCGATCCCGCCT CATACCCCTTCCTCGTCGCACTCTTCGCAGATTCTTCATCCTCCGACCCCGCCCACACCCCAAACCGCAGACCAC GGCAGCACCGGCCCCTCGCCATCGCTGCAGCTCGAGGGCTCCCTCGAGCAGCGCGAATCCTTCCGCCCTCCAATC CCCTGGTACTCGTGCGCCGAGTCAGATTTCCCCATCAAAACGCCTCGTTCGAAGCGTCGGAGAAAACCGCTCACT GCCGATGGCGTCACTCTTTCCTTGCCGCTCGAGAAACATGCATCGCTTGCGGAACAAAGCGCGCCCAGTCCCTCG GAGGTGATTACGTCTTCTGACCTCGCCAGCAAGACGTCTCACCCAAAGTCGGGTCCGCCTACGCCACAAGCCGGC CTCCCTGTTCTGTCGGGAGCCACGACTGGAGATGCGGCCCCAGCGACGGTTGATCGACCCGCCATTCCAGCCGTC CCTGTTATCCCCGCCGTTCCGAGGACCATGTCCAAGGCGTCTGGCGCCGCCGAAATCAAGAAGCAGGCGGCCGAT GCCAGTAAAATCTCCAATGGCGCCACCTCGACTGCCTGCGCCGAGTCCGCCCCAGTCAGCCCTCCGCCCAGACTG GCTCCGACCAGCTGGGCCAACCTCTTTTCCAAACCCGCCGTTAAAGAACCTTCTGCTGCCTCGGAGGCCAACGGT TCTAGTACCGCTAATGGTCCCGTATCACCGGCTGTTACAGCGCCCGCCCCAGGCCGTGCCTTTTCCAAGTCCAAC GCAACTTTGCTCGCCGAGGCCATTCGGGCGTATCGCGTCGGAGGCACCGACACTGTTCCTTTCCTAGAACCACGT GGTCTCATTAACACTGGAAACATGTGCTACATGAACTCGGTTCTCCAGGTTCTCATCTTCTGCACCCCTTTTTTC GACTTCCTAGACCAAGTTAGCAAGAGAGCAGCCTATAGCTTCAAGAGCGAGACTCCGCTCATTGACGCAATGATC ATGTTTCTCCACGAATATAAAGTGCTCGCCTCAGCACCGACCACCAGCTTGCTGCGTCGCAAGCTCAAGAGTGAT GACCTCGAGAAATATGGCGAACCCTTCACGCCCGAATTTGTATACGAAGCCATCAGACAGCTTCCGCGTTTCGCC AGTATGAGGCGTGGTCACCAGCAAGACGCCGAGGAATTCCTCGGCTTCTTGCTTCAGTCGCTCGACGACGAATGC ACAAAGGTGCTGAGCAGCCTGCCGTCGACTGACTCGGACACGGCTTCGGTCGATATGGCCGCCAGCCAGACGCCG GCGGCCAACTCGCCGGGTGACTGGCTAGAGGTCGGTCGCAAGCAGCGTGCGGCCGTCACGCGCTCGTCCGGCTCC AACTCGTCGACGCCCGTCACCAAGATCTTTGGGGGGCTGCTCCGATCCGAGTTTCGTGTCCCCGGACTCAAGGAT TCTATCACCACTGAGCCTTACCAGCCACTCCAGCTCGATATTGGCTCGCCAGACGTGCGCAATGTGATTGACGCC TTGCGTGGGCTGACTCGGCCGGAGCGTCTTCAAGGCGATTTCAACTCTCCTCGCGGCAAGGATGTGACGGCCACG AAGCAAGTCTTCATCGAGTCGCTCCCCCCGGTGCTCATCTTGCACCTCAAACGATTTCAGTTCGACGCCGAGGGT CATGGCACCATCAAGGTCTGGAAGAAGATTGGCTACCCTTTGGAGTTGGAGATTCCGCGCGAGGCCGTGTCGAGG CAGAAGCGTCACAGCATGGGCGACGGCGCGATGCCCAAGTACAGGCTCGTCAGCGTCGTCTATCATCACGGCAGA AACGCCAGCGGCGGTCACTATACCGTCGACGTGCGCCGGCAGGACGGCCTGGAGTGGATTCGCATGGATGACACG GTCCTCCGTCGCGTCCGTAGCGAGGACGTGGCCGAGGGCGGTTCCGAGGAAGATCCGAGGGAGGGTCGCAAAGAC GGCGGCATGGGCGCGTCAGCCAATCGGTTCGGCGTTATCGACGACGAAGAGGCTGGCGACGACGACGAGGGGTGG AAGCAGGTCACAGCTTCGGCCAGCGGCAGCAAGCGCTGGAGCAGCGTCGTCAACGGCAATTCTGGCAATGGAAAC ATAGACGACAAGCAGCAGCTGATGAAGGAGAGCCTCAAGGACAGCAAGGTCGCATATCTGTTGTTCTATCAGCGT ATGTGA |
Transcript | >Ophcf2|06828 ATGAGCGGAGGAGGCCCCGGCCCAGGACCCGGCGGAGGCCCCGGCCCAGGCCCGCGGCGGAGGGGGCAGCCTCAG TACGGGCCGCCGTATCATCACCAGCACCACCATCATCATCATCATCACCAGCAGATGGTCTATGGCGGCTACATC CCTTACGCCCACCAGGGCTACTATGGCATGCCCCCTCAGTTTCAAAATGGTGCCATGCCCTCTCCAGCCTACGTC ACCTACCCGGGCTACACCAGGTCGCCGCCCTCGATGCCCCAGTACGTTCCCTTGGTAGGCGTCAGCACTTCGTCC ACCTACCCTGCCCGCCATTCGCCCAGTCTCTCTACCGCCTACCAGCCTCCCCCAGCTCCGGCTTCGATCCCGCCT CATACCCCTTCCTCGTCGCACTCTTCGCAGATTCTTCATCCTCCGACCCCGCCCACACCCCAAACCGCAGACCAC GGCAGCACCGGCCCCTCGCCATCGCTGCAGCTCGAGGGCTCCCTCGAGCAGCGCGAATCCTTCCGCCCTCCAATC CCCTGGTACTCGTGCGCCGAGTCAGATTTCCCCATCAAAACGCCTCGTTCGAAGCGTCGGAGAAAACCGCTCACT GCCGATGGCGTCACTCTTTCCTTGCCGCTCGAGAAACATGCATCGCTTGCGGAACAAAGCGCGCCCAGTCCCTCG GAGGTGATTACGTCTTCTGACCTCGCCAGCAAGACGTCTCACCCAAAGTCGGGTCCGCCTACGCCACAAGCCGGC CTCCCTGTTCTGTCGGGAGCCACGACTGGAGATGCGGCCCCAGCGACGGTTGATCGACCCGCCATTCCAGCCGTC CCTGTTATCCCCGCCGTTCCGAGGACCATGTCCAAGGCGTCTGGCGCCGCCGAAATCAAGAAGCAGGCGGCCGAT GCCAGTAAAATCTCCAATGGCGCCACCTCGACTGCCTGCGCCGAGTCCGCCCCAGTCAGCCCTCCGCCCAGACTG GCTCCGACCAGCTGGGCCAACCTCTTTTCCAAACCCGCCGTTAAAGAACCTTCTGCTGCCTCGGAGGCCAACGGT TCTAGTACCGCTAATGGTCCCGTATCACCGGCTGTTACAGCGCCCGCCCCAGGCCGTGCCTTTTCCAAGTCCAAC GCAACTTTGCTCGCCGAGGCCATTCGGGCGTATCGCGTCGGAGGCACCGACACTGTTCCTTTCCTAGAACCACGT GGTCTCATTAACACTGGAAACATGTGCTACATGAACTCGGTTCTCCAGGTTCTCATCTTCTGCACCCCTTTTTTC GACTTCCTAGACCAAGTTAGCAAGAGAGCAGCCTATAGCTTCAAGAGCGAGACTCCGCTCATTGACGCAATGATC ATGTTTCTCCACGAATATAAAGTGCTCGCCTCAGCACCGACCACCAGCTTGCTGCGTCGCAAGCTCAAGAGTGAT GACCTCGAGAAATATGGCGAACCCTTCACGCCCGAATTTGTATACGAAGCCATCAGACAGCTTCCGCGTTTCGCC AGTATGAGGCGTGGTCACCAGCAAGACGCCGAGGAATTCCTCGGCTTCTTGCTTCAGTCGCTCGACGACGAATGC ACAAAGGTGCTGAGCAGCCTGCCGTCGACTGACTCGGACACGGCTTCGGTCGATATGGCCGCCAGCCAGACGCCG GCGGCCAACTCGCCGGGTGACTGGCTAGAGGTCGGTCGCAAGCAGCGTGCGGCCGTCACGCGCTCGTCCGGCTCC AACTCGTCGACGCCCGTCACCAAGATCTTTGGGGGGCTGCTCCGATCCGAGTTTCGTGTCCCCGGACTCAAGGAT TCTATCACCACTGAGCCTTACCAGCCACTCCAGCTCGATATTGGCTCGCCAGACGTGCGCAATGTGATTGACGCC TTGCGTGGGCTGACTCGGCCGGAGCGTCTTCAAGGCGATTTCAACTCTCCTCGCGGCAAGGATGTGACGGCCACG AAGCAAGTCTTCATCGAGTCGCTCCCCCCGGTGCTCATCTTGCACCTCAAACGATTTCAGTTCGACGCCGAGGGT CATGGCACCATCAAGGTCTGGAAGAAGATTGGCTACCCTTTGGAGTTGGAGATTCCGCGCGAGGCCGTGTCGAGG CAGAAGCGTCACAGCATGGGCGACGGCGCGATGCCCAAGTACAGGCTCGTCAGCGTCGTCTATCATCACGGCAGA AACGCCAGCGGCGGTCACTATACCGTCGACGTGCGCCGGCAGGACGGCCTGGAGTGGATTCGCATGGATGACACG GTCCTCCGTCGCGTCCGTAGCGAGGACGTGGCCGAGGGCGGTTCCGAGGAAGATCCGAGGGAGGGTCGCAAAGAC GGCGGCATGGGCGCGTCAGCCAATCGGTTCGGCGTTATCGACGACGAAGAGGCTGGCGACGACGACGAGGGGTGG AAGCAGGTCACAGCTTCGGCCAGCGGCAGCAAGCGCTGGAGCAGCGTCGTCAACGGCAATTCTGGCAATGGAAAC ATAGACGACAAGCAGCAGCTGATGAAGGAGAGCCTCAAGGACAGCAAGGTCGCATATCTGTTGTTCTATCAGCGT ATGTGA |
Gene | >Ophcf2|06828 ATGAGCGGAGGAGGCCCCGGCCCAGGACCCGGCGGAGGCCCCGGCCCAGGCCCGCGGCGGAGGGGGCAGCCTCAG TACGGGCCGCCGTATCATCACCAGCACCACCATCATCATCATCATCACCAGCAGATGGTCTATGGCGGCTACATC CCTTACGCCCACCAGGGCTACTATGGCATGCCCCCTCAGTTTCAAAATGGTGCCATGCCCTCTCCAGCCTACGTC ACCTACCCGGGCTACACCAGGTCGCCGCCCTCGATGCCCCAGTACGTTCCCTTGGTAGGCGTCAGCACTTCGTCC ACCTACCCTGCCCGCCATTCGCCCAGTCTCTCTACCGCCTACCAGCCTCCCCCAGCTCCGGCTTCGATCCCGCCT CATACCCCTTCCTCGTCGCACTCTTCGCAGATTCTTCATCCTCCGACCCCGCCCACACCCCAAACCGCAGACCAC GGCAGCACCGGCCCCTCGCCATCGCTGCAGCTCGAGGGCTCCCTCGAGCAGCGCGAATCCTTCCGCCCTCCAGTG AGTTTCCTCTTCATCGTCTCGGTATCGCTTGCCGCTTACAAGCCCCGTATAGATCCCCTGGTACTCGTGCGCCGA GTCAGATTTCCCCATCAAAACGCCTCGTTCGAAGCGTCGGAGAAAACCGCTCACTGCCGATGGCGTCACTCTTTC CTTGCCGCTCGAGAAACATGCATCGCTTGCGGAACAAAGCGCGCCCAGTCCCTCGGAGGTGATTACGTCTTCTGA CCTCGCCAGCAAGACGTCTCACCCAAAGTCGGGTCCGCCTACGCCACAAGCCGGCCTCCCTGTTCTGTCGGGAGC CACGACTGGAGATGCGGCCCCAGCGACGGTTGATCGACCCGCCATTCCAGCCGTCCCTGTTATCCCCGCCGTTCC GAGGACCATGTCCAAGGCGTCTGGCGCCGCCGAAATCAAGAAGCAGGCGGCCGATGCCAGTAAAATCTCCAATGG CGCCACCTCGACTGCCTGCGCCGAGTCCGCCCCAGTCAGCCCTCCGCCCAGACTGGCTCCGACCAGCTGGGCCAA CCTCTTTTCCAAACCCGCCGTTAAAGAACCTTCTGCTGCCTCGGAGGCCAACGGTTCTAGTACCGCTAATGGTCC CGTATCACCGGCTGTTACAGCGCCCGCCCCAGGCCGTGCCTTTTCCAAGTCCAACGCAACTTTGCTCGCCGAGGC CATTCGGGCGTATCGCGTCGGAGGCACCGACACTGTTCCTTTCCTAGAACCACGTGGTCTCATTAACACTGGAAA CATGTGCTACATGAACTCGGTATGGCCATCTACTAACGGGCTGCTCAATGAGATCCGGTGACTGACGCTCTTTCA CCCGCGCTCAGGTTCTCCAGGTTCTCATCTTCTGCACCCCTTTTTTCGACTTCCTAGACCAAGTTAGCAAGAGAG CAGCCTATAGCTTCAAGAGCGAGACTCCGCTCATTGACGCAATGTTCGTTGACCCGCAAGGGGCCGGAGCGGGTT GATTATTGACACAACGCTAGGATCATGTTTCTCCACGAATATAAAGTGCTCGCCTCAGCACCGACCACCAGCTTG CTGCGTCGCAAGCTCAAGAGTGATGACCTCGAGAAATATGGCGAACCCTTCACGCCCGAATTTGTATACGAAGCC ATCAGACAGCTTCCGCGTTTCGCCAGTATGAGGGTAGGTTCATTTGCCACAAAAGGCCAACCAACCAGACGACTT GTTAACGTGCTCCTCACCAGCGTGGTCACCAGCAAGACGCCGAGGAATTCCTCGGCTTCTTGCTTCAGTCGCTCG ACGACGAATGCACAAAGGTGCTGAGCAGCCTGCCGTCGACTGACTCGGACACGGCTTCGGTCGATATGGCCGCCA GCCAGACGCCGGCGGCCAACTCGCCGGGTGACTGGCTAGAGGTCGGTCGCAAGCAGCGTGCGGCCGTCACGCGCT CGTCCGGCTCCAACTCGTCGACGCCCGTCACCAAGATCTTTGGGGGGCTGCTCCGATCCGAGTTTCGTGTCCCCG GACTCAAGGATTCTATCACCACTGAGCCTTACCAGCCACTCCAGCTCGATATTGGCTCGCCAGACGTGCGCAATG TGATTGACGCCTTGCGTGGGCTGACTCGGCCGGAGCGTCTTCAAGGCGATTTCAACTCTCCTCGCGGCAAGGATG TGACGGCCACGAAGCAAGTCTTCATCGAGTCGCTCCCCCCGGTGCTCATCTTGCACCTCAAACGATTTCAGTTCG ACGCCGAGGGTCATGGCACCATCAAGGTCTGGAAGAAGATTGGCTACCCTTTGGAGTTGGAGATTCCGCGCGAGG CCGTGTCGAGGCAGAAGCGTCACAGCATGGGCGACGGCGCGATGCCCAAGTACAGGCTCGTCAGCGTCGTCTATC ATCACGGCAGAAACGCCAGCGGCGGTCACTATACCGTCGACGTGCGCCGGCAGGACGGCCTGGAGTGGATTCGCA TGGATGACACGGTCCTCCGTCGCGTCCGTAGCGAGGACGTGGCCGAGGGCGGTTCCGAGGAAGATCCGAGGGAGG GTCGCAAAGACGGCGGCATGGGCGCGTCAGCCAATCGGTTCGGCGTTATCGACGACGAAGAGGCTGGCGACGACG ACGAGGGGTGGAAGCAGGTCACAGCTTCGGCCAGCGGCAGCAAGCGCTGGAGCAGCGTCGTCAACGGCAATTCTG GCAATGGAAACATAGACGACAAGCAGCAGCTGATGAAGGAGAGCCTCAAGGACAGCAAGGTCGCATATCTGTTGT TCTATCAGCGTATGTGA |