Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06826
Gene name
Locationscaffold_08:1152822..1154162
Strand-
Gene length (bp)1340
Transcript length (bp)1266
Coding sequence length (bp)1266
Protein length (aa) 422

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 3.7E-21 68 164
PF00153 Mito_carr Mitochondrial carrier protein 8.6E-20 168 279
PF00153 Mito_carr Mitochondrial carrier protein 2.2E-18 296 409

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

Domain # Start End Length
1 133 155 22
2 170 192 22
3 247 269 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06826
MSHDESSQARRRALLPSASSSASASASSSEDDDDGRLGGDGSAPGLPTGARPTLLQRWAVGASDSQFNALAGALG
GFTSGVVTCPLDVIKTKLQAQGTYRLVDDGRHVGHPKMYNGLVGTAKVIWRQEGVRGMYRGLGPIILGYLPTWAV
WFTIYNKSKGWLARHSENKFTVSFWSSIIAGASSTIVTNPIWVIKTRLMSQSHMPEADHHYETLYPKSRSTARPT
LQPWHYRSTMDAARKMYSSEGLASFYSGLTPALLGLTHVAVQFPTYEFLKTSFTGQGMGAIPAQGEKAHWLGILS
ASILSKILASSATYPHEVIRTRLQTQRRPLAGEHYLQGLGVSTPSSGGGGSGVEGGPKYRGIVMTFRTILREEGW
RAFYAGLGTNMMRAVPAATVTMLTYECVMRQLNSAKMEGRAALGVS*
Coding >Ophcf2|06826
ATGTCTCACGACGAGTCCTCCCAGGCACGCCGACGGGCTCTTCTGCCTTCCGCTTCCTCCTCCGCTTCCGCCTCC
GCTTCCTCCTCCGAAGACGACGATGATGGTCGACTGGGCGGCGACGGCTCCGCCCCCGGACTGCCGACGGGCGCT
CGACCGACGCTGCTTCAGCGATGGGCCGTCGGGGCTTCGGACTCGCAGTTCAACGCCTTGGCCGGTGCGCTCGGC
GGTTTCACCTCGGGCGTCGTCACCTGCCCGCTCGACGTCATCAAAACTAAGCTGCAGGCGCAGGGAACCTATCGA
CTCGTCGACGACGGCCGTCACGTCGGTCATCCCAAGATGTACAACGGTCTTGTCGGCACCGCAAAGGTCATCTGG
CGCCAGGAGGGCGTCCGCGGCATGTACAGAGGTCTCGGGCCCATCATTCTCGGCTACCTGCCGACGTGGGCCGTG
TGGTTCACGATTTACAATAAGAGCAAGGGCTGGTTGGCGCGTCATTCGGAAAACAAATTCACGGTGAGCTTTTGG
TCTTCCATAATAGCTGGCGCGAGCAGCACCATCGTCACCAACCCCATCTGGGTCATCAAGACTAGACTCATGTCG
CAGAGCCACATGCCCGAGGCCGACCACCACTACGAAACGCTCTATCCCAAGTCTCGAAGCACGGCGCGGCCGACG
CTACAGCCGTGGCACTATCGGTCCACCATGGACGCGGCCCGGAAGATGTACTCGTCCGAGGGCCTCGCGTCCTTT
TACTCGGGATTGACGCCGGCTCTCCTGGGCCTGACGCACGTGGCGGTCCAGTTCCCTACCTACGAGTTTCTCAAG
ACGAGCTTCACGGGGCAAGGCATGGGCGCGATACCCGCTCAGGGCGAAAAGGCGCACTGGCTCGGCATTCTATCT
GCCTCGATACTGTCCAAGATCCTGGCCAGCAGCGCGACGTATCCTCACGAGGTGATCCGCACGAGGCTGCAAACG
CAGCGGCGGCCGCTGGCGGGCGAACACTATCTTCAAGGGCTGGGAGTGTCGACCCCGTCATCCGGCGGCGGAGGC
TCGGGCGTGGAAGGAGGCCCCAAGTACAGGGGCATCGTCATGACGTTCCGCACCATCCTGCGCGAAGAGGGTTGG
CGCGCTTTCTACGCCGGGCTGGGCACCAACATGATGCGAGCCGTGCCGGCGGCGACGGTGACGATGCTGACGTAT
GAGTGCGTGATGCGGCAGCTTAACAGCGCAAAGATGGAGGGCAGAGCGGCGCTGGGCGTGAGCTGA
Transcript >Ophcf2|06826
ATGTCTCACGACGAGTCCTCCCAGGCACGCCGACGGGCTCTTCTGCCTTCCGCTTCCTCCTCCGCTTCCGCCTCC
GCTTCCTCCTCCGAAGACGACGATGATGGTCGACTGGGCGGCGACGGCTCCGCCCCCGGACTGCCGACGGGCGCT
CGACCGACGCTGCTTCAGCGATGGGCCGTCGGGGCTTCGGACTCGCAGTTCAACGCCTTGGCCGGTGCGCTCGGC
GGTTTCACCTCGGGCGTCGTCACCTGCCCGCTCGACGTCATCAAAACTAAGCTGCAGGCGCAGGGAACCTATCGA
CTCGTCGACGACGGCCGTCACGTCGGTCATCCCAAGATGTACAACGGTCTTGTCGGCACCGCAAAGGTCATCTGG
CGCCAGGAGGGCGTCCGCGGCATGTACAGAGGTCTCGGGCCCATCATTCTCGGCTACCTGCCGACGTGGGCCGTG
TGGTTCACGATTTACAATAAGAGCAAGGGCTGGTTGGCGCGTCATTCGGAAAACAAATTCACGGTGAGCTTTTGG
TCTTCCATAATAGCTGGCGCGAGCAGCACCATCGTCACCAACCCCATCTGGGTCATCAAGACTAGACTCATGTCG
CAGAGCCACATGCCCGAGGCCGACCACCACTACGAAACGCTCTATCCCAAGTCTCGAAGCACGGCGCGGCCGACG
CTACAGCCGTGGCACTATCGGTCCACCATGGACGCGGCCCGGAAGATGTACTCGTCCGAGGGCCTCGCGTCCTTT
TACTCGGGATTGACGCCGGCTCTCCTGGGCCTGACGCACGTGGCGGTCCAGTTCCCTACCTACGAGTTTCTCAAG
ACGAGCTTCACGGGGCAAGGCATGGGCGCGATACCCGCTCAGGGCGAAAAGGCGCACTGGCTCGGCATTCTATCT
GCCTCGATACTGTCCAAGATCCTGGCCAGCAGCGCGACGTATCCTCACGAGGTGATCCGCACGAGGCTGCAAACG
CAGCGGCGGCCGCTGGCGGGCGAACACTATCTTCAAGGGCTGGGAGTGTCGACCCCGTCATCCGGCGGCGGAGGC
TCGGGCGTGGAAGGAGGCCCCAAGTACAGGGGCATCGTCATGACGTTCCGCACCATCCTGCGCGAAGAGGGTTGG
CGCGCTTTCTACGCCGGGCTGGGCACCAACATGATGCGAGCCGTGCCGGCGGCGACGGTGACGATGCTGACGTAT
GAGTGCGTGATGCGGCAGCTTAACAGCGCAAAGATGGAGGGCAGAGCGGCGCTGGGCGTGAGCTGA
Gene >Ophcf2|06826
ATGTCTCACGACGAGTCCTCCCAGGCACGCCGACGGGCTCTTCTGCCTTCCGCTTCCTCCTCCGCTTCCGCCTCC
GCTTCCTCCTCCGAAGACGACGATGATGGTCGACTGGGCGGCGACGGCTCCGCCCCCGGACTGCCGACGGGCGCT
CGACCGACGCTGCTTCAGCGATGGGCCGTCGGGGCTTCGGACTCGCAGTTCAACGCCTTGGCCGGTGCGCTCGGC
GGTTTCACCTCGGGCGTCGTCACCTGCCCGCTCGACGTCATCAAAACTAAGCTGCAGGCGCAGGGAACCTATCGA
CTCGTCGACGACGGCCGTCACGTCGGTCATCCCAAGATGTACAACGGTCTTGTCGGCACCGCAAAGGTCATCTGG
CGCCAGGAGGGCGTCCGCGGCATGTACAGAGGTCTCGGGCCCATCATTCTCGGCTACCTGCCGACGTGGGCCGTG
TGGTTCACGATTTACAATAAGAGCAAGGGCTGGTTGGCGCGTCATTCGGGTGCGTTTCTCTCTTTTCCCCCTTGC
TGTCTGTCATCATCATCGTCCGTCCTCCGGCTGACGCTCGAATGGCAGAAAACAAATTCACGGTGAGCTTTTGGT
CTTCCATAATAGCTGGCGCGAGCAGCACCATCGTCACCAACCCCATCTGGGTCATCAAGACTAGACTCATGTCGC
AGAGCCACATGCCCGAGGCCGACCACCACTACGAAACGCTCTATCCCAAGTCTCGAAGCACGGCGCGGCCGACGC
TACAGCCGTGGCACTATCGGTCCACCATGGACGCGGCCCGGAAGATGTACTCGTCCGAGGGCCTCGCGTCCTTTT
ACTCGGGATTGACGCCGGCTCTCCTGGGCCTGACGCACGTGGCGGTCCAGTTCCCTACCTACGAGTTTCTCAAGA
CGAGCTTCACGGGGCAAGGCATGGGCGCGATACCCGCTCAGGGCGAAAAGGCGCACTGGCTCGGCATTCTATCTG
CCTCGATACTGTCCAAGATCCTGGCCAGCAGCGCGACGTATCCTCACGAGGTGATCCGCACGAGGCTGCAAACGC
AGCGGCGGCCGCTGGCGGGCGAACACTATCTTCAAGGGCTGGGAGTGTCGACCCCGTCATCCGGCGGCGGAGGCT
CGGGCGTGGAAGGAGGCCCCAAGTACAGGGGCATCGTCATGACGTTCCGCACCATCCTGCGCGAAGAGGGTTGGC
GCGCTTTCTACGCCGGGCTGGGCACCAACATGATGCGAGCCGTGCCGGCGGCGACGGTGACGATGCTGACGTATG
AGTGCGTGATGCGGCAGCTTAACAGCGCAAAGATGGAGGGCAGAGCGGCGCTGGGCGTGAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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