Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|06817
Gene name
Locationscaffold_08:1134196..1135684
Strand+
Gene length (bp)1488
Transcript length (bp)1350
Coding sequence length (bp)1350
Protein length (aa) 450

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01008 IF-2B Initiation factor 2 subunit family 1.1E-42 39 421

GO

GO Term Description Terminal node
GO:0044237 cellular metabolic process Yes
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0009987 cellular process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear export signal 0.7458 0.5693 0.0517 0.0456 0.0469 0.0346 0.1089 0.1332 0.1248 0.0043

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1338
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6132
Ophiocordyceps australis map64 (Brazil) OphauB2|5257
Ophiocordyceps camponoti-floridani Ophcf2|06817 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|4265
Ophiocordyceps kimflemingae Ophio5|305
Ophiocordyceps subramaniannii Hirsu2|10730

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|06817
MPSATAGHAPDLEKYLKSLKSQSLEAAIERLVSLLKRRQIRGPEPCAIATAHILLQVVARAKWQDADTLLEKICV
TGRRLVEAQPTELAVANVVRRVLALIRDEAAEDRNDILSEAPSEPPMTPIDTTVPSQSWSPPRTAGARQDSTAEM
ASPPPSRAGLFTSYSSTSLPRTLFHLLSASPPSDVFVSMPSSFRNSGTSTPTGRGLQTNSQEHTLRSEVIDGIEE
ILDEISQVDDQIAAQAELQIHPGDHVLIHRLSSTVERFILRAALKRRFTVFLAARAPRAALPDQTVSAFQKKLSA
AGVTAIILRSATLTAYMPRVDKMILDVRAILSNGGVVADSGAATVARAAKEAGSAVVVLAGLYKLSPDQPFYEGS
LIEWASPSTFVGFDDGPLVESIQVRTAATELVPPELIDMYMTNLGTHSRDHLASLVADHYKQEDAGFHLPCNDG*
Coding >Ophcf2|06817
ATGCCCTCGGCCACAGCGGGCCACGCGCCCGACCTCGAAAAATACCTCAAGTCTCTCAAGAGCCAGTCTCTCGAG
GCAGCCATCGAAAGACTCGTATCTCTCCTCAAGCGACGACAGATTCGAGGCCCCGAGCCCTGCGCCATCGCTACC
GCCCACATCCTCCTCCAGGTCGTCGCCAGAGCAAAGTGGCAGGACGCCGACACCCTGCTGGAAAAGATATGCGTC
ACGGGCCGTCGCTTGGTCGAGGCGCAGCCTACGGAGCTGGCCGTCGCCAATGTCGTCCGTCGTGTCCTCGCCTTG
ATCCGCGATGAGGCCGCCGAAGATCGCAACGATATATTGAGCGAGGCTCCCAGCGAGCCACCCATGACGCCAATC
GATACCACCGTCCCGTCCCAGAGTTGGTCGCCGCCGAGGACAGCGGGTGCGAGGCAGGACTCGACTGCTGAAATG
GCTTCTCCTCCGCCCTCTCGCGCCGGACTCTTTACCTCGTACAGCTCGACGAGTCTACCCCGGACGCTGTTCCAC
CTGCTCTCAGCGTCACCTCCTTCCGACGTCTTCGTCTCTATGCCCTCCTCCTTTCGCAACTCGGGAACGTCGACG
CCCACGGGTAGGGGTCTTCAGACCAACAGTCAAGAGCACACGCTACGATCCGAAGTCATCGACGGCATCGAAGAG
ATCCTCGACGAAATAAGTCAAGTCGACGACCAGATCGCCGCCCAAGCCGAGCTACAGATCCACCCGGGGGACCAC
GTCCTCATCCACCGACTCTCCTCCACCGTCGAGCGCTTCATCCTCCGCGCCGCCCTCAAACGCCGCTTCACCGTC
TTCCTCGCCGCCAGAGCGCCCCGCGCAGCGCTGCCAGACCAGACCGTCTCCGCCTTTCAGAAGAAGCTCTCGGCC
GCCGGCGTCACCGCCATCATCCTCCGCAGCGCCACCCTGACGGCCTACATGCCCCGCGTCGACAAGATGATTCTC
GACGTACGCGCCATCCTCTCCAACGGAGGCGTCGTCGCCGACTCCGGCGCCGCCACCGTCGCCCGCGCCGCGAAA
GAAGCAGGCAGCGCCGTCGTCGTCCTCGCCGGCCTCTACAAGCTCAGTCCGGACCAGCCATTCTACGAAGGGTCG
CTCATCGAATGGGCCAGCCCCTCGACCTTTGTCGGCTTCGACGACGGGCCTCTTGTTGAGAGTATCCAGGTCCGG
ACTGCGGCGACGGAGCTGGTTCCGCCGGAGCTCATCGACATGTACATGACCAACTTAGGAACGCACTCGCGTGAT
CACTTGGCAAGTCTGGTGGCAGATCACTACAAGCAGGAGGACGCCGGCTTCCATCTCCCATGTAACGACGGGTGA
Transcript >Ophcf2|06817
ATGCCCTCGGCCACAGCGGGCCACGCGCCCGACCTCGAAAAATACCTCAAGTCTCTCAAGAGCCAGTCTCTCGAG
GCAGCCATCGAAAGACTCGTATCTCTCCTCAAGCGACGACAGATTCGAGGCCCCGAGCCCTGCGCCATCGCTACC
GCCCACATCCTCCTCCAGGTCGTCGCCAGAGCAAAGTGGCAGGACGCCGACACCCTGCTGGAAAAGATATGCGTC
ACGGGCCGTCGCTTGGTCGAGGCGCAGCCTACGGAGCTGGCCGTCGCCAATGTCGTCCGTCGTGTCCTCGCCTTG
ATCCGCGATGAGGCCGCCGAAGATCGCAACGATATATTGAGCGAGGCTCCCAGCGAGCCACCCATGACGCCAATC
GATACCACCGTCCCGTCCCAGAGTTGGTCGCCGCCGAGGACAGCGGGTGCGAGGCAGGACTCGACTGCTGAAATG
GCTTCTCCTCCGCCCTCTCGCGCCGGACTCTTTACCTCGTACAGCTCGACGAGTCTACCCCGGACGCTGTTCCAC
CTGCTCTCAGCGTCACCTCCTTCCGACGTCTTCGTCTCTATGCCCTCCTCCTTTCGCAACTCGGGAACGTCGACG
CCCACGGGTAGGGGTCTTCAGACCAACAGTCAAGAGCACACGCTACGATCCGAAGTCATCGACGGCATCGAAGAG
ATCCTCGACGAAATAAGTCAAGTCGACGACCAGATCGCCGCCCAAGCCGAGCTACAGATCCACCCGGGGGACCAC
GTCCTCATCCACCGACTCTCCTCCACCGTCGAGCGCTTCATCCTCCGCGCCGCCCTCAAACGCCGCTTCACCGTC
TTCCTCGCCGCCAGAGCGCCCCGCGCAGCGCTGCCAGACCAGACCGTCTCCGCCTTTCAGAAGAAGCTCTCGGCC
GCCGGCGTCACCGCCATCATCCTCCGCAGCGCCACCCTGACGGCCTACATGCCCCGCGTCGACAAGATGATTCTC
GACGTACGCGCCATCCTCTCCAACGGAGGCGTCGTCGCCGACTCCGGCGCCGCCACCGTCGCCCGCGCCGCGAAA
GAAGCAGGCAGCGCCGTCGTCGTCCTCGCCGGCCTCTACAAGCTCAGTCCGGACCAGCCATTCTACGAAGGGTCG
CTCATCGAATGGGCCAGCCCCTCGACCTTTGTCGGCTTCGACGACGGGCCTCTTGTTGAGAGTATCCAGGTCCGG
ACTGCGGCGACGGAGCTGGTTCCGCCGGAGCTCATCGACATGTACATGACCAACTTAGGAACGCACTCGCGTGAT
CACTTGGCAAGTCTGGTGGCAGATCACTACAAGCAGGAGGACGCCGGCTTCCATCTCCCATGTAACGACGGGTGA
Gene >Ophcf2|06817
ATGCCCTCGGCCACAGCGGGCCACGCGCCCGACCTCGAAAAATACCTCAAGTCTCTCAAGAGCCAGTCTCTCGAG
GCAGCCATCGAAAGACTCGTATCGTACGTCATTCTTCCTCCCGCCTCACCTTCTCTTCTGACGACAGCTTCAAGT
CTCCTCAAGCGACGACAGATTCGAGGCCCCGAGCCCTGCGCCATCGCTACCGCCCACATCCTCCTCCAGGTCGTC
GCCAGAGCAAAGTGGCAGGACGCCGACACCCTGCTGGAAAAGATATGCGTCACGGGCCGTCGCTTGGTCGAGGCG
CAGCCTACGGAGCTGGCCGTCGCCAATGTCGTCCGTCGTGTCCTCGCCTTGATCCGCGATGAGGCCGCCGAAGAT
CGCAACGATATATTGAGCGAGGCTCCCAGCGAGCCACCCATGACGCCAATCGATACCACCGTCCCGTCCCAGAGT
TGGTCGCCGCCGAGGACAGCGGGTGCGAGGCAGGACTCGACTGCTGAAATGGCTTCTCCTCCGCCCTCTCGCGCC
GGACTCTTTACCTCGTACAGCTCGACGAGTCTACCCCGGACGCTGTTCCACCTGCTCTCAGCGTCACCTCCTTCC
GACGTCTTCGTCTCTATGCCCTCCTCCTTTCGCAACTCGGGAACGTCGACGCCCACGGGTAGGGGTCTTCAGACC
AACAGTCAAGAGCACACGCTACGATCCGAAGTCATCGACGGCATCGAAGAGATCCTCGACGAAATAAGTCAAGTC
GACGACCAGATCGCCGCCCAAGCCGAGCTACAGATCCACCCGGGGGACCACGTCCTCATCCACCGACTCTCCTCC
ACCGTCGAGCGCTTCATCCTCCGCGCCGCCCTCAAACGCCGCTTCACCGTCTTCCTCGCCGCCAGAGCGCCCCGC
GCAGCGCTGCCAGACCAGACCGTCTCCGCCTTTCAGAAGAAGCTCTCGGCCGCCGGCGTCACCGCCATCATCCTC
CGCAGCGCCACCCTGACGGCCTACATGCCCCGCGTCGACAAGATGATTCTCGACGTACGCGCCATCCTCTCCAAC
GGAGGCGTCGTCGCCGACTCCGGCGCCGCCACCGTCGCCCGCGCCGCGAAAGAAGCAGGCAGCGCCGTCGTCGTC
CTCGCCGGCCTCTACAAGCTCAGTCCGGACCAGCCATTCTACGAAGGGTCGCTCATCGAATGGGCCAGCCCCTCG
ACCTTTGTCGGCTTCGACGACGGGCCTCTTGTTGAGAGTATCCAGGTCCGGACTGCGGCGACGGAGCTGGTTCCG
CCGGAGCTCATCGACATGTACATGACCAACTTGTGGGTTTGACCCCCAGACCGCGATTCCAGATGCTGATGGCTG
ACTTTTTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTGTCTATAGAGGAACGCACTCGCGTGATCACTTGGCAAGT
CTGGTGGCAGATCACTACAAGCAGGAGGACGCCGGCTTCCATCTCCCATGTAACGACGGGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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