Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|06814
Gene name
Location	scaffold_08:1126767..1127386
Strand	-
Gene length (bp)	619
Transcript length (bp)	453
Coding sequence length (bp)	453
Protein length (aa)	151

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08570	DUF1761	Protein of unknown function (DUF1761)	3.2E-24	13	139

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 30	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22
2	58	80	22
3	90	112	22
4	121	143	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|06814 MSLHYLPPVKPSAIAVGLAFNQSIELAVLSPIFGKTYQRAKQANTKDEFIRSSEAAGAAAAWGTSFVGAALQSYG VGALINATGTLSYKGAAYLGGLIFTATAMPTYLAQVFTEKRPLDTVGVSMAAKLCETVGLSLFLTWWGTRTNPFD *
Coding	>Ophcf2\|06814 ATGTCTCTGCACTACCTCCCCCCCGTCAAACCCTCGGCCATCGCCGTCGGCCTCGCCTTCAATCAGAGCATCGAG CTAGCCGTCCTCTCTCCCATCTTCGGGAAAACCTACCAGCGCGCCAAGCAGGCCAACACCAAGGACGAGTTCATC CGCTCCAGCGAGGCTGCTGGCGCCGCCGCCGCATGGGGCACCTCGTTCGTCGGCGCCGCCCTGCAGTCGTACGGC GTCGGTGCCCTCATCAACGCTACCGGCACCTTGAGCTACAAGGGCGCTGCTTACCTCGGCGGGCTCATCTTTACC GCTACCGCTATGCCCACTTATCTGGCTCAGGTCTTTACTGAAAAGAGGCCTCTTGATACCGTGGGCGTCAGCATG GCCGCCAAGCTCTGCGAGACAGTCGGCCTCTCGCTCTTCTTGACCTGGTGGGGGACGCGCACGAATCCCTTCGAC TAG
Transcript	>Ophcf2\|06814 ATGTCTCTGCACTACCTCCCCCCCGTCAAACCCTCGGCCATCGCCGTCGGCCTCGCCTTCAATCAGAGCATCGAG CTAGCCGTCCTCTCTCCCATCTTCGGGAAAACCTACCAGCGCGCCAAGCAGGCCAACACCAAGGACGAGTTCATC CGCTCCAGCGAGGCTGCTGGCGCCGCCGCCGCATGGGGCACCTCGTTCGTCGGCGCCGCCCTGCAGTCGTACGGC GTCGGTGCCCTCATCAACGCTACCGGCACCTTGAGCTACAAGGGCGCTGCTTACCTCGGCGGGCTCATCTTTACC GCTACCGCTATGCCCACTTATCTGGCTCAGGTCTTTACTGAAAAGAGGCCTCTTGATACCGTGGGCGTCAGCATG GCCGCCAAGCTCTGCGAGACAGTCGGCCTCTCGCTCTTCTTGACCTGGTGGGGGACGCGCACGAATCCCTTCGAC TAG
Gene	>Ophcf2\|06814 ATGTCTCTGCACTGCAAGTCACCTCCCCATCCCATCCGAGCTTCTCCATTCACCTCCATTCACCCCCATTCAACC CCATTCAATCCATTCACCTCCTTCCAACAGCTAACCGTCAGCAGACCTCCCCCCCGTCAAACCCTCGGCCATCGC CGTCGGCCTCGCCTTCAATCAGAGCATCGAGCTAGCCGTCCTCTCTCCCATCTTCGGGAAAACCTACCAGCGCGC CAAGCAGGCCAACACCAAGGACGAGTTCATCCGCTCCAGCGAGGCTGCTGGCGCCGCCGCCGCATGGGGCACCTC GTTCGTCGGCGCCGCCCTGCAGTCGTACGGCGTCGGTGCCCTCATCAACGCTACCGGCACCTTGAGCTACAAGGG CGCTGCTTACCTCGGCGGGCTCATCTTTACCGCTACCGCTATGCCCACTGTAAGTTGGAGACTGATCGGTCGGGC TTGCTTTGGACACTTTTGCTGATGGTTTGTGCAGTATCTGGCTCAGGTCTTTACTGAAAAGAGGCCTCTTGATAC CGTGGGCGTCAGCATGGCCGCCAAGCTCTGCGAGACAGTCGGCCTCTCGCTCTTCTTGACCTGGTGGGGGACGCG CACGAATCCCTTCGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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