Protein ID | Ophcf2|06793 |
Gene name | |
Location | scaffold_08:1081496..1082743 |
Strand | - |
Gene length (bp) | 1247 |
Transcript length (bp) | 1122 |
Coding sequence length (bp) | 1122 |
Protein length (aa) | 374 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01556 | DnaJ_C | DnaJ C terminal domain | 8.7E-38 | 202 | 358 |
PF00226 | DnaJ | DnaJ domain | 6.2E-28 | 7 | 68 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 49 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|06793 MVKESKLYDTLGVKPDASQDEIKKGYRKAALKWHPDKNKDNPNAAEKFKECSQAYEILSDPEKRKIYDQYGLEFL LRGGAPPPEGAGANPFAGGMPPGFDFGGVGGGGGGARTFHFSTSGGPGGGFSFNSADDTFAEFLRQHAAGGGGAG GVGGGNDEDDFFNIFSSMGGGAGPRAGRPRTRPTGFHDSRKRDPTPEITTVERSLPLTLEELFHGVTKKMKIKRK TFDESGKRVQTDQILEVPIKPGLKKGSKIKFNGVGDQVEGGRQDLHFVVEEKEHTLFKRQDNDIVHTVTLDLKEA LTGWKRTVTTIEGRQINLDKGGPTQPGSEDRYPGLGMPLSKKPGQRGDLIIKYKVNFPSTLTATQKQKLREIL* |
Coding | >Ophcf2|06793 ATGGTCAAGGAAAGCAAGCTCTACGACACGCTCGGCGTCAAGCCCGATGCCTCGCAGGACGAAATCAAGAAAGGA TATAGGAAGGCAGCTCTGAAGTGGCATCCCGACAAGAACAAAGACAATCCCAACGCGGCCGAGAAGTTCAAGGAG TGCTCGCAGGCGTACGAGATCCTTTCGGACCCCGAGAAGCGCAAGATATACGACCAGTACGGGCTCGAGTTCCTG CTACGTGGCGGGGCGCCGCCTCCCGAGGGCGCTGGCGCGAACCCTTTCGCCGGCGGTATGCCCCCAGGCTTCGAC TTTGGCGGTGTAGGAGGCGGCGGCGGTGGTGCGCGGACCTTTCACTTCAGCACCAGCGGCGGGCCCGGGGGCGGC TTCAGCTTCAACAGCGCCGACGATACGTTTGCCGAGTTCCTGCGCCAGCACGCAGCCGGTGGTGGTGGCGCCGGT GGCGTCGGCGGCGGCAACGATGAGGACGACTTTTTCAACATTTTCAGCTCCATGGGTGGCGGTGCTGGTCCGCGT GCTGGAAGGCCTCGGACGCGGCCGACTGGATTTCACGATTCGCGGAAGCGCGACCCGACGCCCGAGATTACGACG GTTGAGCGGTCGCTGCCCTTGACGCTGGAGGAGCTGTTTCACGGCGTGACGAAGAAGATGAAGATCAAGCGCAAG ACGTTTGACGAGTCGGGAAAACGGGTGCAGACGGACCAGATCCTCGAGGTGCCCATCAAGCCCGGCCTCAAGAAG GGGTCCAAGATCAAGTTCAACGGCGTGGGCGATCAGGTCGAGGGCGGTCGTCAGGATCTGCATTTCGTGGTGGAA GAGAAAGAACATACGCTCTTCAAGCGGCAAGACAACGACATCGTGCACACGGTGACGCTCGACCTCAAGGAGGCG CTGACGGGCTGGAAGCGGACCGTCACCACGATCGAGGGCCGGCAGATCAACCTGGACAAGGGAGGGCCGACGCAA CCGGGCAGCGAGGACCGCTATCCCGGGCTGGGGATGCCGCTGTCGAAGAAGCCGGGACAGCGGGGAGACTTGATC ATCAAGTACAAGGTCAACTTCCCGTCGACGCTGACGGCGACGCAGAAGCAGAAGCTGCGGGAGATTCTGTGA |
Transcript | >Ophcf2|06793 ATGGTCAAGGAAAGCAAGCTCTACGACACGCTCGGCGTCAAGCCCGATGCCTCGCAGGACGAAATCAAGAAAGGA TATAGGAAGGCAGCTCTGAAGTGGCATCCCGACAAGAACAAAGACAATCCCAACGCGGCCGAGAAGTTCAAGGAG TGCTCGCAGGCGTACGAGATCCTTTCGGACCCCGAGAAGCGCAAGATATACGACCAGTACGGGCTCGAGTTCCTG CTACGTGGCGGGGCGCCGCCTCCCGAGGGCGCTGGCGCGAACCCTTTCGCCGGCGGTATGCCCCCAGGCTTCGAC TTTGGCGGTGTAGGAGGCGGCGGCGGTGGTGCGCGGACCTTTCACTTCAGCACCAGCGGCGGGCCCGGGGGCGGC TTCAGCTTCAACAGCGCCGACGATACGTTTGCCGAGTTCCTGCGCCAGCACGCAGCCGGTGGTGGTGGCGCCGGT GGCGTCGGCGGCGGCAACGATGAGGACGACTTTTTCAACATTTTCAGCTCCATGGGTGGCGGTGCTGGTCCGCGT GCTGGAAGGCCTCGGACGCGGCCGACTGGATTTCACGATTCGCGGAAGCGCGACCCGACGCCCGAGATTACGACG GTTGAGCGGTCGCTGCCCTTGACGCTGGAGGAGCTGTTTCACGGCGTGACGAAGAAGATGAAGATCAAGCGCAAG ACGTTTGACGAGTCGGGAAAACGGGTGCAGACGGACCAGATCCTCGAGGTGCCCATCAAGCCCGGCCTCAAGAAG GGGTCCAAGATCAAGTTCAACGGCGTGGGCGATCAGGTCGAGGGCGGTCGTCAGGATCTGCATTTCGTGGTGGAA GAGAAAGAACATACGCTCTTCAAGCGGCAAGACAACGACATCGTGCACACGGTGACGCTCGACCTCAAGGAGGCG CTGACGGGCTGGAAGCGGACCGTCACCACGATCGAGGGCCGGCAGATCAACCTGGACAAGGGAGGGCCGACGCAA CCGGGCAGCGAGGACCGCTATCCCGGGCTGGGGATGCCGCTGTCGAAGAAGCCGGGACAGCGGGGAGACTTGATC ATCAAGTACAAGGTCAACTTCCCGTCGACGCTGACGGCGACGCAGAAGCAGAAGCTGCGGGAGATTCTGTGA |
Gene | >Ophcf2|06793 ATGGTCAAGGAAAGCAAGCTCTACGACACGCTCGGCGTCAAGCCCGATGCCTCGCAGGACGAAATCAAGAAAGGA TATAGGTTGGTTGGGGAGCATGGAAAAAATCTCCGTGACGGGTTGGCTGACGACGACGACGACGACGACGCAGGA AGGCAGCTCTGAAGTGGCATCCCGACAAGAACAAAGACAATCCCAACGCGGCCGAGAAGTTCAAGGAGTGCTCGC AGGCGTACGAGATCCTTTCGGACCCCGAGAAGCGCAAGATATACGACCAGTACGGGCTCGAGTTCCTGCTACGTG GCGGGGCGCCGCCTCCCGAGGGCGCTGGCGCGAACCCTTTCGCCGGCGGTATGCCCCCAGGCTTCGACTTTGGCG GTGTAGGAGGCGGCGGCGGTGGTGCGCGGACCTTTCACTTCAGCACCAGCGGCGGGCCCGGGGGCGGCTTCAGCT TCAACAGCGCCGACGATACGTTTGCCGAGTTCCTGCGCCAGCACGCAGCCGGTGGTGGTGGCGCCGGTGGCGTCG GCGGCGGCAACGATGAGGACGACTTTTTCAACATTTTCAGCTCCATGGGTGGCGGTGCTGGTCCGCGTGCTGGAA GGCCTCGGACGCGGCCGACTGGATTTCACGATTCGCGGAAGCGCGACCCGACGCCCGAGATTACGACGGTTGAGC GGTCGCTGCCCTTGACGCTGGAGGAGCTGTTTCACGGCGTGACGAAGAAGATGAAGATCAAGCGCAAGACGTTTG ACGAGTCGGGAAAACGGGTGCAGACGGACCAGATCCTCGAGGTGCCCATCAAGCCCGGCCTCAAGAAGGGGTCCA AGATCAAGTTCAACGGCGTGGGCGATCAGGTCGAGGGCGGTCGTCAGGATCTGCATTTCGTGGTGGAAGAGGTAA GGCGGACGAGAGGTGGGAAGTTAAAAGGTACGGGGGGCTGACGGCACGGGCAGAAAGAACATACGCTCTTCAAGC GGCAAGACAACGACATCGTGCACACGGTGACGCTCGACCTCAAGGAGGCGCTGACGGGCTGGAAGCGGACCGTCA CCACGATCGAGGGCCGGCAGATCAACCTGGACAAGGGAGGGCCGACGCAACCGGGCAGCGAGGACCGCTATCCCG GGCTGGGGATGCCGCTGTCGAAGAAGCCGGGACAGCGGGGAGACTTGATCATCAAGTACAAGGTCAACTTCCCGT CGACGCTGACGGCGACGCAGAAGCAGAAGCTGCGGGAGATTCTGTGA |